RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 FAM151AQ8WW52 585 aa11.63□□□□□ -0.55
MARK3-213ENST00000558611 UBL7Q96S82 380 aaPredicted RBP11.63□□□□□ -0.55
MARK3-213ENST00000558611 IDI2Q9BXS1 227 aa11.63□□□□□ -0.55
MARK3-213ENST00000558611 ZNF700Q9H0M5 742 aa11.63□□□□□ -0.55
MARK3-213ENST00000558611 COL2A1P02458 1487 aaPredicted RBP11.63□□□□□ -0.55
MARK3-213ENST00000558611 FAM95CA0A1B0GW59 222 aa11.62□□□□□ -0.55
MARK3-213ENST00000558611 GSTA4O15217 222 aa11.62□□□□□ -0.55
MARK3-213ENST00000558611 FOXN1O15353 648 aa11.62□□□□□ -0.55
MARK3-213ENST00000558611 USP2O75604 605 aaPredicted RBP11.62□□□□□ -0.55
MARK3-213ENST00000558611 WDHD1O75717 1129 aaPredicted RBP11.62□□□□□ -0.55
MARK3-213ENST00000558611 CBX7O95931 251 aa11.62□□□□□ -0.55
MARK3-213ENST00000558611 ZNF865P0CJ78 1059 aaPredicted RBP11.62□□□□□ -0.55
MARK3-213ENST00000558611 PLS3P13797 630 aa11.62□□□□□ -0.55
MARK3-213ENST00000558611 IFNGR1P15260 489 aa11.62□□□□□ -0.55
MARK3-213ENST00000558611 MAP4P27816 1152 aaKnown RBP11.62□□□□□ -0.55
MARK3-213ENST00000558611 RGS3P49796 1198 aa11.62□□□□□ -0.55
MARK3-213ENST00000558611 GRIK4Q16099 956 aa11.62□□□□□ -0.55
MARK3-213ENST00000558611 CLEC16AQ2KHT3 1053 aa11.62□□□□□ -0.55
MARK3-213ENST00000558611 FAM47CQ5HY64 1035 aa11.62□□□□□ -0.55
MARK3-213ENST00000558611 FAM214BQ7L5A3 538 aa11.62□□□□□ -0.55
MARK3-213ENST00000558611 MYRFLQ96LU7 910 aa11.62□□□□□ -0.55
MARK3-213ENST00000558611 MMP19Q99542 508 aa11.62□□□□□ -0.55
MARK3-213ENST00000558611 SLC12A9Q9BXP2 914 aa11.62□□□□□ -0.55
MARK3-213ENST00000558611 GPR62Q9BZJ7 368 aa11.62□□□□□ -0.55
MARK3-213ENST00000558611 THG1LQ9NWX6 298 aaKnown RBP11.62□□□□□ -0.55
MARK3-213ENST00000558611 TRBV23OR9-2A0A075B6M9 112 aa11.61□□□□□ -0.55
MARK3-213ENST00000558611 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.61□□□□□ -0.55
MARK3-213ENST00000558611 SHISA3A0PJX4 238 aa11.61□□□□□ -0.55
MARK3-213ENST00000558611 ENTPD3O75355 529 aa11.61□□□□□ -0.55
MARK3-213ENST00000558611 LEFTY1O75610 366 aa11.61□□□□□ -0.55
MARK3-213ENST00000558611 IDH1O75874 414 aaKnown RBP11.61□□□□□ -0.55
MARK3-213ENST00000558611 SRGAP2CP0DJJ0 459 aa11.61□□□□□ -0.55
MARK3-213ENST00000558611 KPNA1P52294 538 aaPredicted RBP11.61□□□□□ -0.55
MARK3-213ENST00000558611 KIF23Q02241 960 aaPredicted RBP11.61□□□□□ -0.55
MARK3-213ENST00000558611 NRG1Q02297 640 aaPredicted RBP11.61□□□□□ -0.55
MARK3-213ENST00000558611 ZNF385CQ66K41 422 aaPredicted RBP11.61□□□□□ -0.55
MARK3-213ENST00000558611 OVCH1Q7RTY7 1134 aa11.61□□□□□ -0.55
MARK3-213ENST00000558611 ADGRA1Q86SQ6 560 aa11.61□□□□□ -0.55
MARK3-213ENST00000558611 SAMD3Q8N6K7 520 aa11.61□□□□□ -0.55
MARK3-213ENST00000558611 CHTF18Q8WVB6 975 aa11.61□□□□□ -0.55
MARK3-213ENST00000558611 CLMNQ96JQ2 1002 aa11.61□□□□□ -0.55
MARK3-213ENST00000558611 SCYL1Q96KG9 808 aa11.61□□□□□ -0.55
MARK3-213ENST00000558611 NOL10Q9BSC4 688 aaKnown RBP11.61□□□□□ -0.55
MARK3-213ENST00000558611 DDX4Q9NQI0 724 aaKnown RBP11.61□□□□□ -0.55
MARK3-213ENST00000558611 SPTLC3Q9NUV7 552 aa11.61□□□□□ -0.55
MARK3-213ENST00000558611 CLEC1BQ9P126 229 aa11.61□□□□□ -0.55
MARK3-213ENST00000558611 GTF2IRD1Q9UHL9 959 aa11.61□□□□□ -0.55
MARK3-213ENST00000558611 COMMD10Q9Y6G5 202 aa11.61□□□□□ -0.55
MARK3-213ENST00000558611 ATRNL1Q5VV63 1379 aa11.61□□□□□ -0.55
MARK3-213ENST00000558611 BAG3O95817 575 aa11.6□□□□□ -0.55
MARK3-213ENST00000558611 BMP3P12645 472 aa11.6□□□□□ -0.55
MARK3-213ENST00000558611 VAV1P15498 845 aa11.6□□□□□ -0.55
MARK3-213ENST00000558611 ATP2A2P16615 1042 aaKnown RBP11.6□□□□□ -0.55
MARK3-213ENST00000558611 ATP5JP18859 108 aa11.6□□□□□ -0.55
MARK3-213ENST00000558611 CTCFP49711 727 aaPredicted RBP11.6□□□□□ -0.55
MARK3-213ENST00000558611 SESN3P58005 492 aa11.6□□□□□ -0.55
MARK3-213ENST00000558611 MAP3K12Q12852 859 aa11.6□□□□□ -0.55
MARK3-213ENST00000558611 ABCB5Q2M3G0 1257 aa11.6□□□□□ -0.55
MARK3-213ENST00000558611 TMED8Q6PL24 325 aaPredicted RBP11.6□□□□□ -0.55
MARK3-213ENST00000558611 ZFPM1Q8IX07 1006 aa11.6□□□□□ -0.55
MARK3-213ENST00000558611 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.6□□□□□ -0.55
MARK3-213ENST00000558611 EXOC6Q8TAG9 804 aa11.6□□□□□ -0.55
MARK3-213ENST00000558611 SLC39A13Q96H72 371 aa11.6□□□□□ -0.55
MARK3-213ENST00000558611 AHCYL2Q96HN2 611 aaKnown RBP11.6□□□□□ -0.55
MARK3-213ENST00000558611 FUBP3Q96I24 572 aaKnown RBP eCLIP11.6□□□□□ -0.55
MARK3-213ENST00000558611 AATFQ9NY61 560 aaKnown RBP eCLIP11.6□□□□□ -0.55
MARK3-213ENST00000558611 IP6K2Q9UHH9 426 aa11.6□□□□□ -0.55
MARK3-213ENST00000558611 LOC285556D6RIA3 1793 aa11.59□□□□□ -0.55
MARK3-213ENST00000558611 IGF2BP3O00425 579 aaKnown RBP eCLIP11.59□□□□□ -0.55
MARK3-213ENST00000558611 GOLIM4O00461 696 aa11.59□□□□□ -0.55
MARK3-213ENST00000558611 PRPF3O43395 683 aaKnown RBP11.59□□□□□ -0.55
MARK3-213ENST00000558611 CA12O43570 354 aa11.59□□□□□ -0.55
MARK3-213ENST00000558611 ZBTB48P10074 688 aaPredicted RBP11.59□□□□□ -0.55
MARK3-213ENST00000558611 SRFP11831 508 aa11.59□□□□□ -0.55
MARK3-213ENST00000558611 LCP1P13796 627 aa11.59□□□□□ -0.55
MARK3-213ENST00000558611 KRT85P78386 507 aa11.59□□□□□ -0.55
MARK3-213ENST00000558611 KLF1Q13351 362 aaPredicted RBP11.59□□□□□ -0.55
MARK3-213ENST00000558611 PICALMQ13492 652 aa11.59□□□□□ -0.55
MARK3-213ENST00000558611 VGLL4Q14135 290 aa11.59□□□□□ -0.55
MARK3-213ENST00000558611 ARHGAP44Q17R89 818 aa11.59□□□□□ -0.55
MARK3-213ENST00000558611 PAOXQ6QHF9 649 aa11.59□□□□□ -0.55
MARK3-213ENST00000558611 DGKHQ86XP1 1220 aa11.59□□□□□ -0.55
MARK3-213ENST00000558611 TEX11Q8IYF3 940 aa11.59□□□□□ -0.55
MARK3-213ENST00000558611 SH3RF3Q8TEJ3 882 aaPredicted RBP11.59□□□□□ -0.55
MARK3-213ENST00000558611 FBXW5Q969U6 566 aa11.59□□□□□ -0.55
MARK3-213ENST00000558611 TCTN2Q96GX1 697 aa11.59□□□□□ -0.55
MARK3-213ENST00000558611 WRNIP1Q96S55 665 aa11.59□□□□□ -0.55
MARK3-213ENST00000558611 ZNF341Q9BYN7 854 aa11.59□□□□□ -0.55
MARK3-213ENST00000558611 GPATCH2Q9NW75 528 aa11.59□□□□□ -0.55
MARK3-213ENST00000558611 PAG1Q9NWQ8 432 aa11.59□□□□□ -0.55
MARK3-213ENST00000558611 LUC7L2Q9Y383 392 aaKnown RBP11.59□□□□□ -0.55
MARK3-213ENST00000558611 PTPDC1A2A3K4 754 aa11.58□□□□□ -0.56
MARK3-213ENST00000558611 CCDC66A2RUB6 948 aa11.58□□□□□ -0.56
MARK3-213ENST00000558611 DDTLA6NHG4 134 aaPredicted RBP11.58□□□□□ -0.56
MARK3-213ENST00000558611 C9orf172C9J069 976 aa11.58□□□□□ -0.56
MARK3-213ENST00000558611 SNUPNO95149 360 aaKnown RBP11.58□□□□□ -0.56
MARK3-213ENST00000558611 SOD2P04179 222 aa11.58□□□□□ -0.56
MARK3-213ENST00000558611 FAM87AP0C7U9 286 aa11.58□□□□□ -0.56
MARK3-213ENST00000558611 SPATA31C1P0DKV0 1188 aa11.58□□□□□ -0.56
MARK3-213ENST00000558611 MYBL2P10244 700 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms