RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 SLC39A5Q6ZMH5 540 aa16.27■□□□□ 0.2
VPS18-202ENST00000558474 FAM126BQ8IXS8 530 aa16.27■□□□□ 0.2
VPS18-202ENST00000558474 USP38Q8NB14 1042 aa16.27■□□□□ 0.2
VPS18-202ENST00000558474 XXYLT1Q8NBI6 393 aa16.27■□□□□ 0.2
VPS18-202ENST00000558474 PPP1R13LQ8WUF5 828 aa16.27■□□□□ 0.2
VPS18-202ENST00000558474 ANP32BQ92688 251 aaKnown RBP16.27■□□□□ 0.2
VPS18-202ENST00000558474 FBXL18Q96ME1 805 aa16.27■□□□□ 0.2
VPS18-202ENST00000558474 A0A0B4J269 797 aa16.26■□□□□ 0.19
VPS18-202ENST00000558474 ANKRD63C9JTQ0 380 aa16.26■□□□□ 0.19
VPS18-202ENST00000558474 N4BP3O15049 544 aa16.26■□□□□ 0.19
VPS18-202ENST00000558474 CLIC2O15247 247 aa16.26■□□□□ 0.19
VPS18-202ENST00000558474 CBFA2T2O43439 604 aa16.26■□□□□ 0.19
VPS18-202ENST00000558474 ERLIN2O94905 339 aa16.26■□□□□ 0.19
VPS18-202ENST00000558474 TPM3P06753 285 aa16.26■□□□□ 0.19
VPS18-202ENST00000558474 ADSSP30520 456 aa16.26■□□□□ 0.19
VPS18-202ENST00000558474 KYAT1Q16773 422 aa16.26■□□□□ 0.19
VPS18-202ENST00000558474 ATF7IP2Q5U623 682 aa16.26■□□□□ 0.19
VPS18-202ENST00000558474 POMGNT1Q8WZA1 660 aa16.26■□□□□ 0.19
VPS18-202ENST00000558474 CNOT6LQ96LI5 555 aaKnown RBP16.26■□□□□ 0.19
VPS18-202ENST00000558474 OSMRQ99650 979 aa16.26■□□□□ 0.19
VPS18-202ENST00000558474 TARS2Q9BW92 718 aaKnown RBP16.26■□□□□ 0.19
VPS18-202ENST00000558474 SENP6Q9GZR1 1112 aaPredicted RBP16.26■□□□□ 0.19
VPS18-202ENST00000558474 MINDY3Q9H8M7 445 aa16.26■□□□□ 0.19
VPS18-202ENST00000558474 PTPRHQ9HD43 1115 aa16.26■□□□□ 0.19
VPS18-202ENST00000558474 TRMT13Q9NUP7 481 aaKnown RBP16.26■□□□□ 0.19
VPS18-202ENST00000558474 HSPBP1Q9NZL4 362 aa16.26■□□□□ 0.19
VPS18-202ENST00000558474 CDY2AQ9Y6F7 541 aa16.26■□□□□ 0.19
VPS18-202ENST00000558474 A0A1B0GUA9 196 aa16.25■□□□□ 0.19
VPS18-202ENST00000558474 CLDN3O15551 220 aa16.25■□□□□ 0.19
VPS18-202ENST00000558474 EXOC3O60645 756 aa16.25■□□□□ 0.19
VPS18-202ENST00000558474 SERPINC1P01008 464 aa16.25■□□□□ 0.19
VPS18-202ENST00000558474 ATP1A3P13637 1013 aa16.25■□□□□ 0.19
VPS18-202ENST00000558474 THPOP40225 353 aa16.25■□□□□ 0.19
VPS18-202ENST00000558474 FANCCQ00597 558 aa16.25■□□□□ 0.19
VPS18-202ENST00000558474 MCL1Q07820 350 aa16.25■□□□□ 0.19
VPS18-202ENST00000558474 TMEM62Q0P6H9 643 aa16.25■□□□□ 0.19
VPS18-202ENST00000558474 BFSP2Q13515 415 aa16.25■□□□□ 0.19
VPS18-202ENST00000558474 FILIP1LQ4L180 1135 aa16.25■□□□□ 0.19
VPS18-202ENST00000558474 MPZL3Q6UWV2 235 aa16.25■□□□□ 0.19
VPS18-202ENST00000558474 GPD1LQ8N335 351 aa16.25■□□□□ 0.19
VPS18-202ENST00000558474 DHX38Q92620 1227 aaKnown RBP16.25■□□□□ 0.19
VPS18-202ENST00000558474 CCDC51Q96ER9 411 aa16.25■□□□□ 0.19
VPS18-202ENST00000558474 C11orf49Q9H6J7 331 aa16.25■□□□□ 0.19
VPS18-202ENST00000558474 DCDC2CA8MYV0 355 aa16.24■□□□□ 0.19
VPS18-202ENST00000558474 PITPNM1O00562 1244 aa16.24■□□□□ 0.19
VPS18-202ENST00000558474 EXTL3O43909 919 aa16.24■□□□□ 0.19
VPS18-202ENST00000558474 TSPAN1O60635 241 aa16.24■□□□□ 0.19
VPS18-202ENST00000558474 AKAP3O75969 853 aa16.24■□□□□ 0.19
VPS18-202ENST00000558474 PARNO95453 639 aaKnown RBP16.24■□□□□ 0.19
VPS18-202ENST00000558474 IQCF3P0C7M6 154 aa16.24■□□□□ 0.19
VPS18-202ENST00000558474 MCF2P10911 925 aa16.24■□□□□ 0.19
VPS18-202ENST00000558474 KRT31Q15323 416 aa16.24■□□□□ 0.19
VPS18-202ENST00000558474 CCDC40Q4G0X9 1142 aa16.24■□□□□ 0.19
VPS18-202ENST00000558474 CEP135Q66GS9 1140 aa16.24■□□□□ 0.19
VPS18-202ENST00000558474 NOTUMQ6P988 496 aa16.24■□□□□ 0.19
VPS18-202ENST00000558474 INTS8Q75QN2 995 aaKnown RBP16.24■□□□□ 0.19
VPS18-202ENST00000558474 CATSPER4Q7RTX7 472 aa16.24■□□□□ 0.19
VPS18-202ENST00000558474 APTXQ7Z2E3 356 aaKnown RBP16.24■□□□□ 0.19
VPS18-202ENST00000558474 NECAB2Q7Z6G3 386 aa16.24■□□□□ 0.19
VPS18-202ENST00000558474 USP37Q86T82 979 aa16.24■□□□□ 0.19
VPS18-202ENST00000558474 TRIM59Q8IWR1 403 aa16.24■□□□□ 0.19
VPS18-202ENST00000558474 FAM186BQ8IYM0 893 aa16.24■□□□□ 0.19
VPS18-202ENST00000558474 WNT8BQ93098 351 aa16.24■□□□□ 0.19
VPS18-202ENST00000558474 ADPGKQ9BRR6 497 aa16.24■□□□□ 0.19
VPS18-202ENST00000558474 CBWD1Q9BRT8 395 aa16.24■□□□□ 0.19
VPS18-202ENST00000558474 TUBGCP2Q9BSJ2 902 aa16.24■□□□□ 0.19
VPS18-202ENST00000558474 TRPV6Q9H1D0 765 aa16.24■□□□□ 0.19
VPS18-202ENST00000558474 CDHR5Q9HBB8 845 aa16.24■□□□□ 0.19
VPS18-202ENST00000558474 CHST12Q9NRB3 414 aa16.24■□□□□ 0.19
VPS18-202ENST00000558474 AGPAT5Q9NUQ2 364 aa16.24■□□□□ 0.19
VPS18-202ENST00000558474 ARMCX3Q9UH62 379 aaPredicted RBP16.24■□□□□ 0.19
VPS18-202ENST00000558474 AGO2Q9UKV8 859 aaKnown RBP16.24■□□□□ 0.19
VPS18-202ENST00000558474 CENPFP49454 3210 aa16.23■□□□□ 0.19
VPS18-202ENST00000558474 A0A1B0GTH6 734 aa16.23■□□□□ 0.19
VPS18-202ENST00000558474 ABLIM1O14639 778 aa16.23■□□□□ 0.19
VPS18-202ENST00000558474 GPR182O15218 404 aa16.23■□□□□ 0.19
VPS18-202ENST00000558474 CHRNA1P02708 482 aa16.23■□□□□ 0.19
VPS18-202ENST00000558474 EDN1P05305 212 aa16.23■□□□□ 0.19
VPS18-202ENST00000558474 CKBP12277 381 aa16.23■□□□□ 0.19
VPS18-202ENST00000558474 ARF4P18085 180 aaPredicted RBP16.23■□□□□ 0.19
VPS18-202ENST00000558474 MTIF2P46199 727 aaKnown RBP16.23■□□□□ 0.19
VPS18-202ENST00000558474 CYP2J2P51589 502 aa16.23■□□□□ 0.19
VPS18-202ENST00000558474 UBASH3AP57075 661 aa16.23■□□□□ 0.19
VPS18-202ENST00000558474 NOLC1Q14978 699 aaKnown RBP eCLIP16.23■□□□□ 0.19
VPS18-202ENST00000558474 MAN2A1Q16706 1144 aa16.23■□□□□ 0.19
VPS18-202ENST00000558474 DCAF4L1Q3SXM0 396 aa16.23■□□□□ 0.19
VPS18-202ENST00000558474 BORCS6Q96GS4 357 aa16.23■□□□□ 0.19
VPS18-202ENST00000558474 MRFAP1L1Q96HT8 127 aa16.23■□□□□ 0.19
VPS18-202ENST00000558474 ZNF668Q96K58 619 aaPredicted RBP16.23■□□□□ 0.19
VPS18-202ENST00000558474 PPP1R16BQ96T49 567 aa16.23■□□□□ 0.19
VPS18-202ENST00000558474 MSTO1Q9BUK6 570 aa16.23■□□□□ 0.19
VPS18-202ENST00000558474 TRIM5Q9C035 493 aa16.23■□□□□ 0.19
VPS18-202ENST00000558474 IKZF4Q9H2S9 585 aa16.23■□□□□ 0.19
VPS18-202ENST00000558474 GINS2Q9Y248 185 aa16.23■□□□□ 0.19
VPS18-202ENST00000558474 ZNF233A6NK53 670 aa16.22■□□□□ 0.19
VPS18-202ENST00000558474 OGTO15294 1046 aa16.22■□□□□ 0.19
VPS18-202ENST00000558474 RPS6KA5O75582 802 aa16.22■□□□□ 0.19
VPS18-202ENST00000558474 KRT13P13646 458 aa16.22■□□□□ 0.19
VPS18-202ENST00000558474 MATR3P43243 847 aaKnown RBP eCLIP16.22■□□□□ 0.19
VPS18-202ENST00000558474 COPB1P53618 953 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms