RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 SYKP43405 635 aa13.74□□□□□ -0.21
LRRC28-206ENST00000558471 ERVK-21P61565 698 aa13.74□□□□□ -0.21
LRRC28-206ENST00000558471 AMPD3Q01432 767 aa13.74□□□□□ -0.21
LRRC28-206ENST00000558471 TMEM132AQ24JP5 1023 aa13.74□□□□□ -0.21
LRRC28-206ENST00000558471 ATF7IP2Q5U623 682 aa13.74□□□□□ -0.21
LRRC28-206ENST00000558471 EEF1DP3Q658K8 133 aa13.74□□□□□ -0.21
LRRC28-206ENST00000558471 AGMOQ6ZNB7 445 aa13.74□□□□□ -0.21
LRRC28-206ENST00000558471 SFR1Q86XK3 245 aa13.74□□□□□ -0.21
LRRC28-206ENST00000558471 FAM178BQ8IXR5 827 aa13.74□□□□□ -0.21
LRRC28-206ENST00000558471 CNNM3Q8NE01 707 aa13.74□□□□□ -0.21
LRRC28-206ENST00000558471 MRPS27Q92552 414 aaKnown RBP13.74□□□□□ -0.21
LRRC28-206ENST00000558471 KCNN1Q92952 543 aa13.74□□□□□ -0.21
LRRC28-206ENST00000558471 PGBD4Q96DM1 585 aa13.74□□□□□ -0.21
LRRC28-206ENST00000558471 TGS1Q96RS0 853 aaKnown RBP13.74□□□□□ -0.21
LRRC28-206ENST00000558471 ACO2Q99798 780 aaKnown RBP13.74□□□□□ -0.21
LRRC28-206ENST00000558471 C7orf25Q9BPX7 421 aa13.74□□□□□ -0.21
LRRC28-206ENST00000558471 C17orf80Q9BSJ5 609 aa13.74□□□□□ -0.21
LRRC28-206ENST00000558471 TARS2Q9BW92 718 aaKnown RBP13.74□□□□□ -0.21
LRRC28-206ENST00000558471 TRIM9Q9C026 710 aa13.74□□□□□ -0.21
LRRC28-206ENST00000558471 TMEM117Q9H0C3 514 aa13.74□□□□□ -0.21
LRRC28-206ENST00000558471 RNF39Q9H2S5 420 aa13.74□□□□□ -0.21
LRRC28-206ENST00000558471 GOLPH3LQ9H4A5 285 aa13.74□□□□□ -0.21
LRRC28-206ENST00000558471 MAGEF1Q9HAY2 307 aa13.74□□□□□ -0.21
LRRC28-206ENST00000558471 PANK4Q9NVE7 773 aa13.74□□□□□ -0.21
LRRC28-206ENST00000558471 HES2Q9Y543 173 aa13.74□□□□□ -0.21
LRRC28-206ENST00000558471 IPPQ9Y573 584 aa13.74□□□□□ -0.21
LRRC28-206ENST00000558471 CHD9Q3L8U1 2897 aa13.74□□□□□ -0.21
LRRC28-206ENST00000558471 RALGAPA2Q2PPJ7 1873 aa13.74□□□□□ -0.21
LRRC28-206ENST00000558471 TRIP11Q15643 1979 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 FRMD3A2A2Y4 597 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 H0YCG3 227 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 K7ENM7 598 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 RFXAPO00287 272 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 OFD1O75665 1012 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 GAP43P17677 238 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 CASP1P29466 404 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 AFMP43652 599 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 STRN3Q13033 797 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 ZC2HC1CQ53FD0 456 aaPredicted RBP13.73□□□□□ -0.21
LRRC28-206ENST00000558471 HERC4Q5GLZ8 1057 aaPredicted RBP13.73□□□□□ -0.21
LRRC28-206ENST00000558471 CNNM4Q6P4Q7 775 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 LRRC55Q6ZSA7 311 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 ZNF720Q7Z2F6 126 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 GRAMD1CQ8IYS0 662 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 CEP57L1Q8IYX8 460 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 ABI1Q8IZP0 508 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 HELQQ8TDG4 1101 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 ARNTL2Q8WYA1 636 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 PAGE5Q96GU1 130 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 GUCD1Q96NT3 240 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 MRPL4Q9BYD3 311 aaKnown RBP13.73□□□□□ -0.21
LRRC28-206ENST00000558471 TRIM6Q9C030 488 aaPredicted RBP13.73□□□□□ -0.21
LRRC28-206ENST00000558471 BLZF1Q9H2G9 400 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 PRDM12Q9H4Q4 367 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 PTPRHQ9HD43 1115 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 TBC1D7Q9P0N9 293 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 USP25Q9UHP3 1055 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 MTUS1Q9ULD2 1270 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 TBX20Q9UMR3 447 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 TNFSF13BQ9Y275 285 aa13.73□□□□□ -0.21
LRRC28-206ENST00000558471 MRPL42Q9Y6G3 142 aaKnown RBP13.73□□□□□ -0.21
LRRC28-206ENST00000558471 GOLGA6L4A6NEF3 574 aa13.72□□□□□ -0.21
LRRC28-206ENST00000558471 EPOPA6NHQ4 379 aa13.72□□□□□ -0.21
LRRC28-206ENST00000558471 ITGA4P13612 1032 aa13.72□□□□□ -0.21
LRRC28-206ENST00000558471 AFF1P51825 1210 aaKnown RBP13.72□□□□□ -0.21
LRRC28-206ENST00000558471 GTF2BQ00403 316 aa13.72□□□□□ -0.21
LRRC28-206ENST00000558471 CUL4BQ13620 913 aa13.72□□□□□ -0.21
LRRC28-206ENST00000558471 CCDC65Q8IXS2 484 aa13.72□□□□□ -0.21
LRRC28-206ENST00000558471 TMEM192Q8IY95 271 aa13.72□□□□□ -0.21
LRRC28-206ENST00000558471 CLP1Q92989 425 aaKnown RBP13.72□□□□□ -0.21
LRRC28-206ENST00000558471 ZBTB45Q96K62 511 aaPredicted RBP13.72□□□□□ -0.21
LRRC28-206ENST00000558471 CDX2Q99626 313 aaPredicted RBP13.72□□□□□ -0.21
LRRC28-206ENST00000558471 ADPGKQ9BRR6 497 aa13.72□□□□□ -0.21
LRRC28-206ENST00000558471 APOL6Q9BWW8 343 aa13.72□□□□□ -0.21
LRRC28-206ENST00000558471 NXF3Q9H4D5 531 aaKnown RBP13.72□□□□□ -0.21
LRRC28-206ENST00000558471 ST6GALNAC4Q9H4F1 302 aa13.72□□□□□ -0.21
LRRC28-206ENST00000558471 MRPL44Q9H9J2 332 aaKnown RBP13.72□□□□□ -0.21
LRRC28-206ENST00000558471 TYW1Q9NV66 732 aaKnown RBP13.72□□□□□ -0.21
LRRC28-206ENST00000558471 HCSTQ9UBK5 93 aa13.72□□□□□ -0.21
LRRC28-206ENST00000558471 SEL1LQ9UBV2 794 aa13.72□□□□□ -0.21
LRRC28-206ENST00000558471 TDRD15B5MCY1 1934 aaKnown RBP13.72□□□□□ -0.21
LRRC28-206ENST00000558471 ABLIM1O14639 778 aa13.71□□□□□ -0.21
LRRC28-206ENST00000558471 PPP1R37O75864 691 aa13.71□□□□□ -0.21
LRRC28-206ENST00000558471 ZNF202O95125 648 aa13.71□□□□□ -0.21
LRRC28-206ENST00000558471 SCP2P22307 547 aa13.71□□□□□ -0.21
LRRC28-206ENST00000558471 PROZP22891 400 aa13.71□□□□□ -0.21
LRRC28-206ENST00000558471 AKAP5P24588 427 aa13.71□□□□□ -0.21
LRRC28-206ENST00000558471 BMPR1AP36894 532 aa13.71□□□□□ -0.21
LRRC28-206ENST00000558471 ASIC1P78348 528 aa13.71□□□□□ -0.21
LRRC28-206ENST00000558471 COASYQ13057 564 aa13.71□□□□□ -0.21
LRRC28-206ENST00000558471 EPC2Q52LR7 807 aa13.71□□□□□ -0.21
LRRC28-206ENST00000558471 GLB1LQ6UWU2 654 aa13.71□□□□□ -0.21
LRRC28-206ENST00000558471 SLC17A8Q8NDX2 589 aa13.71□□□□□ -0.21
LRRC28-206ENST00000558471 HPS3Q969F9 1004 aa13.71□□□□□ -0.21
LRRC28-206ENST00000558471 SAMD11Q96NU1 681 aa13.71□□□□□ -0.21
LRRC28-206ENST00000558471 TCHPQ9BT92 498 aa13.71□□□□□ -0.21
LRRC28-206ENST00000558471 STRA6Q9BX79 667 aa13.71□□□□□ -0.21
LRRC28-206ENST00000558471 CWH43Q9H720 699 aa13.71□□□□□ -0.21
LRRC28-206ENST00000558471 RSAD1Q9HA92 442 aa13.71□□□□□ -0.21
LRRC28-206ENST00000558471 OLFML3Q9NRN5 406 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms