RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 H0YCG3 227 aa13.59□□□□□ -0.23
SMAD3-205ENST00000558428 K7ENM7 598 aa13.59□□□□□ -0.23
SMAD3-205ENST00000558428 TRAK2O60296 914 aa13.59□□□□□ -0.23
SMAD3-205ENST00000558428 ITGA4P13612 1032 aa13.59□□□□□ -0.23
SMAD3-205ENST00000558428 FOSL2P15408 326 aa13.59□□□□□ -0.23
SMAD3-205ENST00000558428 CMA1P23946 247 aa13.59□□□□□ -0.23
SMAD3-205ENST00000558428 NCKAP1LP55160 1127 aa13.59□□□□□ -0.23
SMAD3-205ENST00000558428 STRN3Q13033 797 aa13.59□□□□□ -0.23
SMAD3-205ENST00000558428 EPC2Q52LR7 807 aa13.59□□□□□ -0.23
SMAD3-205ENST00000558428 NT5DC1Q5TFE4 455 aa13.59□□□□□ -0.23
SMAD3-205ENST00000558428 TAS1R3Q7RTX0 852 aa13.59□□□□□ -0.23
SMAD3-205ENST00000558428 MRPL10Q7Z7H8 261 aaKnown RBP13.59□□□□□ -0.23
SMAD3-205ENST00000558428 HACE1Q8IYU2 909 aa13.59□□□□□ -0.23
SMAD3-205ENST00000558428 SMG8Q8ND04 991 aaKnown RBP13.59□□□□□ -0.23
SMAD3-205ENST00000558428 GDPD5Q8WTR4 605 aa13.59□□□□□ -0.23
SMAD3-205ENST00000558428 CLP1Q92989 425 aaKnown RBP13.59□□□□□ -0.23
SMAD3-205ENST00000558428 DNAJC19Q96DA6 116 aa13.59□□□□□ -0.23
SMAD3-205ENST00000558428 PYM1Q9BRP8 204 aaKnown RBP13.59□□□□□ -0.23
SMAD3-205ENST00000558428 ADPGKQ9BRR6 497 aa13.59□□□□□ -0.23
SMAD3-205ENST00000558428 APOL6Q9BWW8 343 aa13.59□□□□□ -0.23
SMAD3-205ENST00000558428 MRPL4Q9BYD3 311 aaKnown RBP13.59□□□□□ -0.23
SMAD3-205ENST00000558428 LRRC27Q9C0I9 530 aa13.59□□□□□ -0.23
SMAD3-205ENST00000558428 TNMDQ9H2S6 317 aa13.59□□□□□ -0.23
SMAD3-205ENST00000558428 PDZD7Q9H5P4 517 aa13.59□□□□□ -0.23
SMAD3-205ENST00000558428 TYW1Q9NV66 732 aaKnown RBP13.59□□□□□ -0.23
SMAD3-205ENST00000558428 INPP5FQ9Y2H2 1132 aa13.59□□□□□ -0.23
SMAD3-205ENST00000558428 HES2Q9Y543 173 aa13.59□□□□□ -0.23
SMAD3-205ENST00000558428 EYSQ5T1H1 3165 aa13.59□□□□□ -0.23
SMAD3-205ENST00000558428 PRRC2BQ5JSZ5 2229 aaKnown RBP13.59□□□□□ -0.23
SMAD3-205ENST00000558428 MYO7AQ13402 2215 aa13.58□□□□□ -0.24
SMAD3-205ENST00000558428 LINC00271P0C7V0 271 aa13.58□□□□□ -0.24
SMAD3-205ENST00000558428 MAPTP10636 758 aaKnown RBP13.58□□□□□ -0.24
SMAD3-205ENST00000558428 IDEP14735 1019 aa13.58□□□□□ -0.24
SMAD3-205ENST00000558428 PFKFB1P16118 471 aa13.58□□□□□ -0.24
SMAD3-205ENST00000558428 BMPR1AP36894 532 aa13.58□□□□□ -0.24
SMAD3-205ENST00000558428 AMPD3Q01432 767 aa13.58□□□□□ -0.24
SMAD3-205ENST00000558428 ATF7IP2Q5U623 682 aa13.58□□□□□ -0.24
SMAD3-205ENST00000558428 EEF1DP3Q658K8 133 aa13.58□□□□□ -0.24
SMAD3-205ENST00000558428 GLB1LQ6UWU2 654 aa13.58□□□□□ -0.24
SMAD3-205ENST00000558428 AGMOQ6ZNB7 445 aa13.58□□□□□ -0.24
SMAD3-205ENST00000558428 HAUS6Q7Z4H7 955 aa13.58□□□□□ -0.24
SMAD3-205ENST00000558428 SFR1Q86XK3 245 aa13.58□□□□□ -0.24
SMAD3-205ENST00000558428 FAM178BQ8IXR5 827 aa13.58□□□□□ -0.24
SMAD3-205ENST00000558428 LRRC43Q8N309 656 aa13.58□□□□□ -0.24
SMAD3-205ENST00000558428 TARS2Q9BW92 718 aaKnown RBP13.58□□□□□ -0.24
SMAD3-205ENST00000558428 MRPL9Q9BYD2 267 aaKnown RBP13.58□□□□□ -0.24
SMAD3-205ENST00000558428 NXF3Q9H4D5 531 aaKnown RBP13.58□□□□□ -0.24
SMAD3-205ENST00000558428 RSAD1Q9HA92 442 aa13.58□□□□□ -0.24
SMAD3-205ENST00000558428 MAGEF1Q9HAY2 307 aa13.58□□□□□ -0.24
SMAD3-205ENST00000558428 KBTBD4Q9NVX7 518 aa13.58□□□□□ -0.24
SMAD3-205ENST00000558428 CHMP5Q9NZZ3 219 aa13.58□□□□□ -0.24
SMAD3-205ENST00000558428 HCSTQ9UBK5 93 aa13.58□□□□□ -0.24
SMAD3-205ENST00000558428 TDRD15B5MCY1 1934 aaKnown RBP13.58□□□□□ -0.24
SMAD3-205ENST00000558428 TRIP11Q15643 1979 aa13.58□□□□□ -0.24
SMAD3-205ENST00000558428 A0A1W2PQ27 194 aa13.57□□□□□ -0.24
SMAD3-205ENST00000558428 A0A1W2PQ64 194 aa13.57□□□□□ -0.24
SMAD3-205ENST00000558428 A0A1W2PQD8 194 aa13.57□□□□□ -0.24
SMAD3-205ENST00000558428 OFD1O75665 1012 aa13.57□□□□□ -0.24
SMAD3-205ENST00000558428 GAP43P17677 238 aa13.57□□□□□ -0.24
SMAD3-205ENST00000558428 IGFBP4P22692 258 aa13.57□□□□□ -0.24
SMAD3-205ENST00000558428 NMT1P30419 496 aaKnown RBP13.57□□□□□ -0.24
SMAD3-205ENST00000558428 ADGRE1Q14246 886 aa13.57□□□□□ -0.24
SMAD3-205ENST00000558428 DCAF4L1Q3SXM0 396 aa13.57□□□□□ -0.24
SMAD3-205ENST00000558428 NOMO2Q5JPE7 1267 aa13.57□□□□□ -0.24
SMAD3-205ENST00000558428 LRRC55Q6ZSA7 311 aa13.57□□□□□ -0.24
SMAD3-205ENST00000558428 CEP57L1Q8IYX8 460 aa13.57□□□□□ -0.24
SMAD3-205ENST00000558428 FSIP1Q8NA03 581 aa13.57□□□□□ -0.24
SMAD3-205ENST00000558428 URGCPQ8TCY9 931 aa13.57□□□□□ -0.24
SMAD3-205ENST00000558428 RSPH1Q8WYR4 309 aa13.57□□□□□ -0.24
SMAD3-205ENST00000558428 BICD1Q96G01 975 aa13.57□□□□□ -0.24
SMAD3-205ENST00000558428 FIZ1Q96SL8 496 aa13.57□□□□□ -0.24
SMAD3-205ENST00000558428 ACO2Q99798 780 aaKnown RBP13.57□□□□□ -0.24
SMAD3-205ENST00000558428 RNF39Q9H2S5 420 aa13.57□□□□□ -0.24
SMAD3-205ENST00000558428 CWH43Q9H720 699 aa13.57□□□□□ -0.24
SMAD3-205ENST00000558428 UBN1Q9NPG3 1134 aa13.57□□□□□ -0.24
SMAD3-205ENST00000558428 AAASQ9NRG9 546 aa13.57□□□□□ -0.24
SMAD3-205ENST00000558428 PANK4Q9NVE7 773 aa13.57□□□□□ -0.24
SMAD3-205ENST00000558428 SEL1LQ9UBV2 794 aa13.57□□□□□ -0.24
SMAD3-205ENST00000558428 PARP2Q9UGN5 583 aa13.57□□□□□ -0.24
SMAD3-205ENST00000558428 SERTAD1Q9UHV2 236 aa13.57□□□□□ -0.24
SMAD3-205ENST00000558428 TNFSF13BQ9Y275 285 aa13.57□□□□□ -0.24
SMAD3-205ENST00000558428 STXBP5LQ9Y2K9 1186 aa13.57□□□□□ -0.24
SMAD3-205ENST00000558428 CITO14578 2027 aa13.56□□□□□ -0.24
SMAD3-205ENST00000558428 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.56□□□□□ -0.24
SMAD3-205ENST00000558428 C5orf67F2Z3F1 127 aa13.56□□□□□ -0.24
SMAD3-205ENST00000558428 H3BNC9 293 aa13.56□□□□□ -0.24
SMAD3-205ENST00000558428 RB1P06400 928 aa13.56□□□□□ -0.24
SMAD3-205ENST00000558428 LAG3P18627 525 aa13.56□□□□□ -0.24
SMAD3-205ENST00000558428 SCP2P22307 547 aa13.56□□□□□ -0.24
SMAD3-205ENST00000558428 AKAP5P24588 427 aa13.56□□□□□ -0.24
SMAD3-205ENST00000558428 SYKP43405 635 aa13.56□□□□□ -0.24
SMAD3-205ENST00000558428 ASIC1P78348 528 aa13.56□□□□□ -0.24
SMAD3-205ENST00000558428 RNASELQ05823 741 aaKnown RBP13.56□□□□□ -0.24
SMAD3-205ENST00000558428 GPM6BQ13491 265 aa13.56□□□□□ -0.24
SMAD3-205ENST00000558428 ZNF568Q3ZCX4 644 aa13.56□□□□□ -0.24
SMAD3-205ENST00000558428 HERC4Q5GLZ8 1057 aaPredicted RBP13.56□□□□□ -0.24
SMAD3-205ENST00000558428 APBB1IPQ7Z5R6 666 aaPredicted RBP13.56□□□□□ -0.24
SMAD3-205ENST00000558428 CCDC65Q8IXS2 484 aa13.56□□□□□ -0.24
SMAD3-205ENST00000558428 COLGALT1Q8NBJ5 622 aa13.56□□□□□ -0.24
SMAD3-205ENST00000558428 SLC17A8Q8NDX2 589 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms