RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 SH3GLB2Q9NR46 395 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 AIPL1Q9NZN9 384 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 CCDC78A2IDD5 438 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 A8MXQ7 604 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 HSD17B3P37058 310 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 ITKQ08881 620 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 ORC2Q13416 577 aaPredicted RBP12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 RAD9BQ6WBX8 426 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 MICU2Q8IYU8 434 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 CAVIN3Q969G5 261 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 TUBE1Q9UJT0 475 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 COMMD3-BMI1R4GMX3 469 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 YTHDC2Q9H6S0 1430 aaKnown RBP12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 MAP3K19Q56UN5 1328 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 SPAG6O75602 509 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 CIAO1O76071 339 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 OCM2P0CE71 109 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 OCMP0CE72 109 aaPredicted RBP12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 HOXC9P31274 260 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 PABPC4Q13310 644 aaKnown RBP eCLIP12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 PTCH1Q13635 1447 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 SLC18A3Q16572 532 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 AASDHQ4L235 1098 aaPredicted RBP12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 GALNT4Q8N4A0 578 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 ZNF564Q8TBZ8 553 aaPredicted RBP12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 MAGEB18Q96M61 343 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 ZBED2Q9BTP6 218 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 ADD3Q9UEY8 706 aaKnown RBP12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 CAPN1P07384 714 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 CALB2P22676 271 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 VCPP55072 806 aaKnown RBP12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 GPS1Q13098 491 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 NDUFA5Q16718 116 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 NCAPG2Q86XI2 1143 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 PCYOX1LQ8NBM8 494 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 CYGBQ8WWM9 190 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 ZFYVE19Q96K21 471 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 DMAP1Q9NPF5 467 aaPredicted RBP12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 ABCF3Q9NUQ8 709 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 FAM153AQ9UHL3 310 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 CHD1O14646 1710 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 ZFYVE16Q7Z3T8 1539 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 RAD51CO43502 376 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 SERPINB9P50453 376 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 KRT76Q01546 638 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 HIF1AQ16665 826 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 RHOT1Q8IXI2 618 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 GUF1Q8N442 669 aaKnown RBP12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 USP38Q8NB14 1042 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 PI4K2BQ8TCG2 481 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 IP6K1Q92551 441 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 ACAP3Q96P50 834 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 NACC1Q96RE7 527 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 DDX56Q9NY93 547 aaKnown RBP12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 LZTS3O60299 673 aaPredicted RBP12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 TSPAN9O75954 239 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 PLA2G4BP0C869 781 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 MYCLP12524 364 aaPredicted RBP12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 S100A1P23297 94 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 SLC34A1Q06495 639 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 ZNF211Q13398 564 aaPredicted RBP12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 DEPDC1Q5TB30 811 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 PLEKHA7Q6IQ23 1121 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 TRAPPC11Q7Z392 1133 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 GPR101Q96P66 508 aaPredicted RBP12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 EML4Q9HC35 981 aaKnown RBP12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 C2CD2Q9Y426 696 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 TARSP26639 723 aaKnown RBP12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 RFC4P35249 363 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 COPAP53621 1224 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 EIF6P56537 245 aaKnown RBP12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 MFSD4BQ5TF39 518 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 CYFIP1Q7L576 1253 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 OR2W6PQ8NHA6 318 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 ERP44Q9BS26 406 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 MTA3Q9BTC8 594 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 WDR11Q9BZH6 1224 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 DBR1Q9UK59 544 aaKnown RBP12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 RTCBQ9Y3I0 505 aaKnown RBP12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 GOLGA8SH3BPF8 625 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 SLC1A1P43005 524 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 DDR1Q08345 913 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 ELOA2Q8IYF1 753 aaPredicted RBP12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 CHURC1Q8WUH1 139 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 GORASP1Q9BQQ3 440 aa12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 PABPC3Q9H361 631 aaKnown RBP12.44□□□□□ -0.42
CSPG4P12-201ENST00000558282 HNRNPDLO14979 420 aaKnown RBP12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 CLIC2O15247 247 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 CBFA2T3O75081 653 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 SRGNP10124 158 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 LONRF1Q17RB8 773 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 IZUMO2Q6UXV1 221 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 EP400NLQ6ZTU2 488 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 CLEC4FQ8N1N0 589 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 TNIP2Q8NFZ5 429 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 HERC5Q9UII4 1024 aaKnown RBP12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 SLC13A4Q9UKG4 626 aa12.43□□□□□ -0.42
CSPG4P12-201ENST00000558282 RPAP1Q9BWH6 1393 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms