RNA–Protein interactions for RNA: ENST00000557592.5

APEX1-220, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-220ENST00000557592 PCDHB13Q9Y5F0 798 aa12.46□□□□□ -0.41
APEX1-220ENST00000557592 A0A0U1RQF3 1178 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 A0A1W2PPC1 479 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 HNRNPDLO14979 420 aaKnown RBP12.45□□□□□ -0.42
APEX1-220ENST00000557592 PPP1R37O75864 691 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 STAG3L1P0CL83 205 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 SKIP12755 728 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 MATR3P43243 847 aaKnown RBP eCLIP12.45□□□□□ -0.42
APEX1-220ENST00000557592 LIG4P49917 911 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 RAB27AP51159 221 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 PSMD2Q13200 908 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 CAMK4Q16566 473 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 EEF1DP3Q658K8 133 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 FAM109BQ6ICB4 259 aaPredicted RBP12.45□□□□□ -0.42
APEX1-220ENST00000557592 ECHDC2Q86YB7 292 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 NPAS4Q8IUM7 802 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 MAP4K3Q8IVH8 894 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 HERC6Q8IVU3 1022 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 PHOSPHO2Q8TCD6 241 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 GPT2Q8TD30 523 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 KCNN1Q92952 543 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 SMARCE1Q969G3 411 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 TOP1MTQ969P6 601 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 ACCSQ96QU6 501 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 TCHPQ9BT92 498 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 ZBED2Q9BTP6 218 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 TRAIPQ9BWF2 469 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 STRA6Q9BX79 667 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 EIF2AQ9BY44 585 aaKnown RBP12.45□□□□□ -0.42
APEX1-220ENST00000557592 TRIM6Q9C030 488 aaPredicted RBP12.45□□□□□ -0.42
APEX1-220ENST00000557592 FAM105AQ9NUU6 356 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 RNF216Q9NWF9 866 aaPredicted RBP12.45□□□□□ -0.42
APEX1-220ENST00000557592 RMND1Q9NWS8 449 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 ANKFY1Q9P2R3 1169 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 TNFSF13BQ9Y275 285 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 PCDHB7Q9Y5E2 793 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 PCDHB2Q9Y5E7 798 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 PCDHA5Q9Y5H7 936 aa12.45□□□□□ -0.42
APEX1-220ENST00000557592 GBF1Q92538 1859 aa12.44□□□□□ -0.42
APEX1-220ENST00000557592 GRXCR1A8MXD5 290 aa12.44□□□□□ -0.42
APEX1-220ENST00000557592 EIF3DO15371 548 aaKnown RBP eCLIP12.44□□□□□ -0.425e-15■■□□□ 13.2
APEX1-220ENST00000557592 PRPF6O94906 941 aaKnown RBP12.44□□□□□ -0.42
APEX1-220ENST00000557592 RHOBTB3O94955 611 aa12.44□□□□□ -0.42
APEX1-220ENST00000557592 MBD3O95983 291 aa12.44□□□□□ -0.42
APEX1-220ENST00000557592 HARSP12081 509 aaKnown RBP12.44□□□□□ -0.42
APEX1-220ENST00000557592 FAM189BP81408 668 aa12.44□□□□□ -0.42
APEX1-220ENST00000557592 KCNA1Q09470 495 aa12.44□□□□□ -0.42
APEX1-220ENST00000557592 KCNB1Q14721 858 aa12.44□□□□□ -0.42
APEX1-220ENST00000557592 ZNF568Q3ZCX4 644 aa12.44□□□□□ -0.42
APEX1-220ENST00000557592 MPZL3Q6UWV2 235 aa12.44□□□□□ -0.42
APEX1-220ENST00000557592 ZPBP2Q6X784 338 aa12.44□□□□□ -0.42
APEX1-220ENST00000557592 APBB1IPQ7Z5R6 666 aaPredicted RBP12.44□□□□□ -0.42
APEX1-220ENST00000557592 ZBTB33Q86T24 672 aa12.44□□□□□ -0.42
APEX1-220ENST00000557592 SYCP3Q8IZU3 236 aa12.44□□□□□ -0.42
APEX1-220ENST00000557592 GSDMAQ96QA5 445 aa12.44□□□□□ -0.42
APEX1-220ENST00000557592 IKZF4Q9H2S9 585 aa12.44□□□□□ -0.42
APEX1-220ENST00000557592 CLSTN2Q9H4D0 955 aa12.44□□□□□ -0.42
APEX1-220ENST00000557592 ELAC1Q9H777 363 aaKnown RBP12.44□□□□□ -0.42
APEX1-220ENST00000557592 TMEM161AQ9NX61 479 aa12.44□□□□□ -0.42
APEX1-220ENST00000557592 EXOC7Q9UPT5 735 aa12.44□□□□□ -0.42
APEX1-220ENST00000557592 LAMA3Q16787 3333 aa12.43□□□□□ -0.42
APEX1-220ENST00000557592 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.43□□□□□ -0.42
APEX1-220ENST00000557592 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.43□□□□□ -0.42
APEX1-220ENST00000557592 TLL1O43897 1013 aa12.43□□□□□ -0.42
APEX1-220ENST00000557592 TOM1L1O75674 476 aa12.43□□□□□ -0.42
APEX1-220ENST00000557592 GJB5O95377 273 aa12.43□□□□□ -0.42
APEX1-220ENST00000557592 PIGRP01833 764 aa12.43□□□□□ -0.42
APEX1-220ENST00000557592 FGFR1P11362 822 aa12.43□□□□□ -0.42
APEX1-220ENST00000557592 ATF7P17544 494 aaPredicted RBP12.43□□□□□ -0.42
APEX1-220ENST00000557592 RABGGTBP53611 331 aa12.43□□□□□ -0.42
APEX1-220ENST00000557592 STK4Q13043 487 aa12.43□□□□□ -0.42
APEX1-220ENST00000557592 DCAF4L1Q3SXM0 396 aa12.43□□□□□ -0.42
APEX1-220ENST00000557592 SLC39A4Q6P5W5 647 aa12.43□□□□□ -0.42
APEX1-220ENST00000557592 EPM2AIP1Q7L775 607 aaPredicted RBP12.43□□□□□ -0.42
APEX1-220ENST00000557592 NELFCDQ8IXH7 590 aa12.43□□□□□ -0.42
APEX1-220ENST00000557592 KIAA0895Q8NCT3 520 aa12.43□□□□□ -0.42
APEX1-220ENST00000557592 SMG8Q8ND04 991 aaKnown RBP12.43□□□□□ -0.42
APEX1-220ENST00000557592 LPPQ93052 612 aa12.43□□□□□ -0.42
APEX1-220ENST00000557592 PGBD4Q96DM1 585 aa12.43□□□□□ -0.42
APEX1-220ENST00000557592 ZBTB45Q96K62 511 aaPredicted RBP12.43□□□□□ -0.42
APEX1-220ENST00000557592 YME1L1Q96TA2 773 aa12.43□□□□□ -0.42
APEX1-220ENST00000557592 APOL6Q9BWW8 343 aa12.43□□□□□ -0.42
APEX1-220ENST00000557592 NUP62CLQ9H1M0 184 aa12.43□□□□□ -0.42
APEX1-220ENST00000557592 CDT1Q9H211 546 aa12.43□□□□□ -0.42
APEX1-220ENST00000557592 NXF3Q9H4D5 531 aaKnown RBP12.43□□□□□ -0.42
APEX1-220ENST00000557592 TMEM206Q9H813 350 aa12.43□□□□□ -0.42
APEX1-220ENST00000557592 GDAQ9Y2T3 454 aa12.43□□□□□ -0.42
APEX1-220ENST00000557592 HES2Q9Y543 173 aa12.43□□□□□ -0.42
APEX1-220ENST00000557592 IPPQ9Y573 584 aa12.43□□□□□ -0.42
APEX1-220ENST00000557592 UBE4BO95155 1302 aa12.42□□□□□ -0.42
APEX1-220ENST00000557592 TISP43B9A030 160 aa12.42□□□□□ -0.42
APEX1-220ENST00000557592 ANKRD63C9JTQ0 380 aa12.42□□□□□ -0.42
APEX1-220ENST00000557592 BIN1O00499 593 aa12.42□□□□□ -0.42
APEX1-220ENST00000557592 CLDN3O15551 220 aa12.42□□□□□ -0.42
APEX1-220ENST00000557592 ZNF623O75123 536 aa12.42□□□□□ -0.42
APEX1-220ENST00000557592 EOMESO95936 686 aa12.42□□□□□ -0.42
APEX1-220ENST00000557592 MCF2P10911 925 aa12.42□□□□□ -0.42
APEX1-220ENST00000557592 ITGA4P13612 1032 aa12.42□□□□□ -0.42
APEX1-220ENST00000557592 PROZP22891 400 aa12.42□□□□□ -0.42
APEX1-220ENST00000557592 GATMP50440 423 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms