RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 FUCA1P04066 466 aa6□□□□□ -1.45
MTHFD1-216ENST00000557539 MTNR1BP49286 362 aa6□□□□□ -1.45
MTHFD1-216ENST00000557539 SEC23AQ15436 765 aa6□□□□□ -1.45
MTHFD1-216ENST00000557539 FSCN1Q16658 493 aaKnown RBP6□□□□□ -1.45
MTHFD1-216ENST00000557539 UGT8Q16880 541 aa6□□□□□ -1.45
MTHFD1-216ENST00000557539 GAB4Q2WGN9 574 aa6□□□□□ -1.45
MTHFD1-216ENST00000557539 TMEM95Q3KNT9 176 aa6□□□□□ -1.45
MTHFD1-216ENST00000557539 HLA-DQA1Q5Y7H0 255 aa6□□□□□ -1.45
MTHFD1-216ENST00000557539 CREG2Q8IUH2 290 aa6□□□□□ -1.45
MTHFD1-216ENST00000557539 SIRT2Q8IXJ6 389 aa6□□□□□ -1.45
MTHFD1-216ENST00000557539 CAMKK1Q8N5S9 505 aa6□□□□□ -1.45
MTHFD1-216ENST00000557539 FAM181AQ8N9Y4 354 aa6□□□□□ -1.45
MTHFD1-216ENST00000557539 FAM156AQ8NDB6 213 aa6□□□□□ -1.45
MTHFD1-216ENST00000557539 SSH1Q8WYL5 1049 aa6□□□□□ -1.45
MTHFD1-216ENST00000557539 DLG3Q92796 817 aa6□□□□□ -1.45
MTHFD1-216ENST00000557539 EAF2Q96CJ1 260 aaPredicted RBP6□□□□□ -1.45
MTHFD1-216ENST00000557539 METTL22Q9BUU2 404 aaPredicted RBP6□□□□□ -1.45
MTHFD1-216ENST00000557539 ZNF277Q9NRM2 450 aaPredicted RBP6□□□□□ -1.45
MTHFD1-216ENST00000557539 KCNH7Q9NS40 1196 aa6□□□□□ -1.45
MTHFD1-216ENST00000557539 HDAC9Q9UKV0 1011 aa6□□□□□ -1.45
MTHFD1-216ENST00000557539 U3KQE9 123 aa6□□□□□ -1.45
MTHFD1-216ENST00000557539 CYP26A1O43174 497 aa5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 PQBP1O60828 265 aaKnown RBP5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 PPP1R11O60927 126 aaPredicted RBP5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 SLC5A1P13866 664 aa5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 HALP42357 657 aa5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 OXCT1P55809 520 aa5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 TEKQ02763 1124 aa5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 POU5F1BQ06416 359 aa5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 EGR3Q06889 387 aa5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 CCDC62Q6P9F0 684 aa5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 FBXO46Q6PJ61 603 aaPredicted RBP5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 OVCH2Q7RTZ1 564 aa5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 CXorf67Q86X51 503 aaPredicted RBP5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 NLGN4XQ8N0W4 816 aa5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 Q8N1Y9 231 aa5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 PAF1Q8N7H5 531 aa5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 ACRBPQ8NEB7 543 aa5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 KRTAP9-9Q9BYP9 154 aa5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 KRTAP9-4Q9BYQ2 154 aa5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 SEMA4AQ9H3S1 761 aa5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 SAGE1Q9NXZ1 904 aa5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 TERF2IPQ9NYB0 399 aa5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 SERPINB13Q9UIV8 391 aa5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 TUBD1Q9UJT1 453 aa5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 ZNF281Q9Y2X9 895 aa5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 RWDD3Q9Y3V2 267 aa5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 PCDHGB6Q9Y5F9 930 aa5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 X6R8D5 127 aa5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 NCOR1O75376 2440 aa5.99□□□□□ -1.45
MTHFD1-216ENST00000557539 COL18A1P39060 1754 aa5.98□□□□□ -1.45
MTHFD1-216ENST00000557539 C5orf42Q9H799 3197 aa5.98□□□□□ -1.45
MTHFD1-216ENST00000557539 CCDC18Q5T9S5 1454 aa5.98□□□□□ -1.45
MTHFD1-216ENST00000557539 USP9XQ93008 2570 aaPredicted RBP5.98□□□□□ -1.45
MTHFD1-216ENST00000557539 KRIT1O00522 736 aa5.98□□□□□ -1.45
MTHFD1-216ENST00000557539 NBNO60934 754 aa5.98□□□□□ -1.45
MTHFD1-216ENST00000557539 SETSIPP0DME0 302 aa5.98□□□□□ -1.45
MTHFD1-216ENST00000557539 PDCP20941 246 aa5.98□□□□□ -1.45
MTHFD1-216ENST00000557539 PPM1FP49593 454 aaPredicted RBP5.98□□□□□ -1.45
MTHFD1-216ENST00000557539 ALDH5A1P51649 535 aaPredicted RBP5.98□□□□□ -1.45
MTHFD1-216ENST00000557539 CYP27A1Q02318 531 aa5.98□□□□□ -1.45
MTHFD1-216ENST00000557539 EPHA7Q15375 998 aa5.98□□□□□ -1.45
MTHFD1-216ENST00000557539 KIAA0753Q2KHM9 967 aa5.98□□□□□ -1.45
MTHFD1-216ENST00000557539 SPTY2D1Q68D10 685 aaPredicted RBP5.98□□□□□ -1.45
MTHFD1-216ENST00000557539 THAP5Q7Z6K1 395 aa5.98□□□□□ -1.45
MTHFD1-216ENST00000557539 SPACA3Q8IXA5 215 aa5.98□□□□□ -1.45
MTHFD1-216ENST00000557539 RBM12BQ8IXT5 1001 aaKnown RBP5.98□□□□□ -1.45
MTHFD1-216ENST00000557539 UHMK1Q8TAS1 419 aaKnown RBP5.98□□□□□ -1.45
MTHFD1-216ENST00000557539 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.98□□□□□ -1.45
MTHFD1-216ENST00000557539 MVB12AQ96EY5 273 aa5.98□□□□□ -1.45
MTHFD1-216ENST00000557539 FCRL2Q96LA5 508 aaPredicted RBP5.98□□□□□ -1.45
MTHFD1-216ENST00000557539 SLC6A20Q9NP91 592 aa5.98□□□□□ -1.45
MTHFD1-216ENST00000557539 USP36Q9P275 1121 aaKnown RBP5.98□□□□□ -1.45
MTHFD1-216ENST00000557539 FNIP2Q9P278 1114 aa5.98□□□□□ -1.45
MTHFD1-216ENST00000557539 ZC3H7BQ9UGR2 993 aaKnown RBP5.98□□□□□ -1.45
MTHFD1-216ENST00000557539 USP34Q70CQ2 3546 aa5.98□□□□□ -1.45
MTHFD1-216ENST00000557539 KIAA0100Q14667 2235 aaKnown RBP5.97□□□□□ -1.45
MTHFD1-216ENST00000557539 F5H423 210 aaPredicted RBP5.97□□□□□ -1.45
MTHFD1-216ENST00000557539 LPLP06858 475 aa5.97□□□□□ -1.45
MTHFD1-216ENST00000557539 ZKSCAN1P17029 563 aaPredicted RBP5.97□□□□□ -1.45
MTHFD1-216ENST00000557539 CD53P19397 219 aa5.97□□□□□ -1.45
MTHFD1-216ENST00000557539 MANFP55145 182 aaKnown RBP5.97□□□□□ -1.45
MTHFD1-216ENST00000557539 DUSP27Q5VZP5 1158 aa5.97□□□□□ -1.45
MTHFD1-216ENST00000557539 ESPNLQ6ZVH7 1005 aa5.97□□□□□ -1.45
MTHFD1-216ENST00000557539 USP45Q70EL2 814 aa5.97□□□□□ -1.45
MTHFD1-216ENST00000557539 CBLL1Q75N03 491 aa5.97□□□□□ -1.45
MTHFD1-216ENST00000557539 KCNK18Q7Z418 384 aa5.97□□□□□ -1.45
MTHFD1-216ENST00000557539 DENND1CQ8IV53 801 aa5.97□□□□□ -1.45
MTHFD1-216ENST00000557539 SMAP1Q8IYB5 467 aaPredicted RBP5.97□□□□□ -1.45
MTHFD1-216ENST00000557539 C7orf31Q8N865 590 aa5.97□□□□□ -1.45
MTHFD1-216ENST00000557539 PLEKHO2Q8TD55 490 aa5.97□□□□□ -1.45
MTHFD1-216ENST00000557539 C1GALT1C1Q96EU7 318 aa5.97□□□□□ -1.45
MTHFD1-216ENST00000557539 C16orf92Q96LL3 132 aa5.97□□□□□ -1.45
MTHFD1-216ENST00000557539 HERPUD2Q9BSE4 406 aa5.97□□□□□ -1.45
MTHFD1-216ENST00000557539 APOL5Q9BWW9 433 aa5.97□□□□□ -1.45
MTHFD1-216ENST00000557539 SMOC1Q9H4F8 434 aa5.97□□□□□ -1.45
MTHFD1-216ENST00000557539 RIC8BQ9NVN3 520 aa5.97□□□□□ -1.45
MTHFD1-216ENST00000557539 LUZP4Q9P127 313 aa5.97□□□□□ -1.45
MTHFD1-216ENST00000557539 PPP2R3BQ9Y5P8 575 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms