RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 RB1P06400 928 aa9.19□□□□□ -0.94
PSEN1-223ENST00000557511 ME1P48163 572 aa9.19□□□□□ -0.94
PSEN1-223ENST00000557511 NASPP49321 788 aaPredicted RBP9.19□□□□□ -0.94
PSEN1-223ENST00000557511 NUCB2P80303 420 aa9.19□□□□□ -0.94
PSEN1-223ENST00000557511 DHX8Q14562 1220 aaKnown RBP9.19□□□□□ -0.94
PSEN1-223ENST00000557511 DSC3Q14574 896 aa9.19□□□□□ -0.94
PSEN1-223ENST00000557511 PTPAQ15257 358 aa9.19□□□□□ -0.94
PSEN1-223ENST00000557511 ECM1Q16610 540 aa9.19□□□□□ -0.94
PSEN1-223ENST00000557511 CSPP1Q1MSJ5 1256 aa9.19□□□□□ -0.94
PSEN1-223ENST00000557511 PAN2Q504Q3 1202 aaKnown RBP9.19□□□□□ -0.94
PSEN1-223ENST00000557511 GLB1LQ6UWU2 654 aa9.19□□□□□ -0.94
PSEN1-223ENST00000557511 GPBP1Q86WP2 473 aa9.19□□□□□ -0.94
PSEN1-223ENST00000557511 TMEM192Q8IY95 271 aa9.19□□□□□ -0.94
PSEN1-223ENST00000557511 LRRC43Q8N309 656 aa9.19□□□□□ -0.94
PSEN1-223ENST00000557511 MICALL1Q8N3F8 863 aa9.19□□□□□ -0.94
PSEN1-223ENST00000557511 SYT2Q8N9I0 419 aaPredicted RBP9.19□□□□□ -0.94
PSEN1-223ENST00000557511 URGCPQ8TCY9 931 aa9.19□□□□□ -0.94
PSEN1-223ENST00000557511 LINC01599Q8WXQ3 324 aa9.19□□□□□ -0.94
PSEN1-223ENST00000557511 LARP4BQ92615 738 aaKnown RBP9.19□□□□□ -0.94
PSEN1-223ENST00000557511 MMTAG2Q9BU76 263 aaKnown RBP9.19□□□□□ -0.94
PSEN1-223ENST00000557511 C11orf84Q9BUA3 381 aaPredicted RBP9.19□□□□□ -0.94
PSEN1-223ENST00000557511 CCSER1Q9C0I3 900 aa9.19□□□□□ -0.94
PSEN1-223ENST00000557511 LRRC27Q9C0I9 530 aa9.19□□□□□ -0.94
PSEN1-223ENST00000557511 TMEM117Q9H0C3 514 aa9.19□□□□□ -0.94
PSEN1-223ENST00000557511 UBN1Q9NPG3 1134 aa9.19□□□□□ -0.94
PSEN1-223ENST00000557511 GPRC5CQ9NQ84 441 aa9.19□□□□□ -0.94
PSEN1-223ENST00000557511 KMT5AQ9NQR1 393 aa9.19□□□□□ -0.94
PSEN1-223ENST00000557511 AGPAT5Q9NUQ2 364 aa9.19□□□□□ -0.94
PSEN1-223ENST00000557511 FAM105AQ9NUU6 356 aa9.19□□□□□ -0.94
PSEN1-223ENST00000557511 FAM13BQ9NYF5 915 aa9.19□□□□□ -0.94
PSEN1-223ENST00000557511 LARSQ9P2J5 1176 aaKnown RBP9.19□□□□□ -0.94
PSEN1-223ENST00000557511 TFIP11Q9UBB9 837 aaKnown RBP9.19□□□□□ -0.94
PSEN1-223ENST00000557511 STK17AQ9UEE5 414 aa9.19□□□□□ -0.94
PSEN1-223ENST00000557511 RBM19Q9Y4C8 960 aaKnown RBP9.19□□□□□ -0.94
PSEN1-223ENST00000557511 MORC2Q9Y6X9 1032 aaPredicted RBP9.19□□□□□ -0.94
PSEN1-223ENST00000557511 K7ERI5 159 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 CUTAO60888 179 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 HIP1RO75146 1068 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 PRKCBP05771 671 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 ITGA4P13612 1032 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 LAG3P18627 525 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 PLCG1P19174 1290 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 GUCY2CP25092 1073 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 ABCD1P33897 745 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 ANP32AP39687 249 aaKnown RBP9.18□□□□□ -0.94
PSEN1-223ENST00000557511 STAT6P42226 847 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 PEX3P56589 373 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 KRT85P78386 507 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 FAM189BP81408 668 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 RNASELQ05823 741 aaKnown RBP9.18□□□□□ -0.94
PSEN1-223ENST00000557511 STRN3Q13033 797 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 GRB10Q13322 594 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 GPM6BQ13491 265 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 PRPF4BQ13523 1007 aaKnown RBP9.18□□□□□ -0.94
PSEN1-223ENST00000557511 BMS1Q14692 1282 aaKnown RBP9.18□□□□□ -0.94
PSEN1-223ENST00000557511 KARSQ15046 597 aaKnown RBP9.18□□□□□ -0.94
PSEN1-223ENST00000557511 SKIV2LQ15477 1246 aaKnown RBP9.18□□□□□ -0.94
PSEN1-223ENST00000557511 TMEM119Q4V9L6 283 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 EPC2Q52LR7 807 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 NAALADL2Q58DX5 795 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 RINT1Q6NUQ1 792 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 SV2BQ7L1I2 683 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 LINC00301Q8NCQ3 95 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 MAFAQ8NHW3 353 aaPredicted RBP9.18□□□□□ -0.94
PSEN1-223ENST00000557511 RAD54LQ92698 747 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 SYMPKQ92797 1274 aaKnown RBP9.18□□□□□ -0.94
PSEN1-223ENST00000557511 PPP2R3CQ969Q6 453 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 ZNF689Q96CS4 500 aaPredicted RBP9.18□□□□□ -0.94
PSEN1-223ENST00000557511 GUCD1Q96NT3 240 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 PNMA5Q96PV4 448 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 FAM193BQ96PV7 902 aaPredicted RBP9.18□□□□□ -0.94
PSEN1-223ENST00000557511 PYM1Q9BRP8 204 aaKnown RBP9.18□□□□□ -0.94
PSEN1-223ENST00000557511 REPIN1Q9BWE0 567 aaKnown RBP9.18□□□□□ -0.94
PSEN1-223ENST00000557511 TRAIPQ9BWF2 469 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 PLVAPQ9BX97 442 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 ZHX3Q9H4I2 956 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 LMCD1Q9NZU5 365 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 CNTNAP2Q9UHC6 1331 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 PUF60Q9UHX1 559 aaKnown RBP9.18□□□□□ -0.94
PSEN1-223ENST00000557511 FBXO2Q9UK22 296 aaPredicted RBP9.18□□□□□ -0.94
PSEN1-223ENST00000557511 ODF2LQ9ULJ1 636 aa9.18□□□□□ -0.94
PSEN1-223ENST00000557511 TET1Q8NFU7 2136 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 N4BP3O15049 544 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 TSPAN1O60635 241 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 LPXNO60711 386 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 ZNF623O75123 536 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 FGFR1P11362 822 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 PLS3P13797 630 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 SCP2P22307 547 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 DDIT3P35638 169 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 PPM1AP35813 382 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 BMPR1AP36894 532 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 AMPD3Q01432 767 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 MBTD1Q05BQ5 628 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 RAD51AP2Q09MP3 1159 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 SPECC1Q5M775 1068 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 CDCA2Q69YH5 1023 aaPredicted RBP9.17□□□□□ -0.94
PSEN1-223ENST00000557511 SLC27A1Q6PCB7 646 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 C1orf186Q6ZWK4 172 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 SCUBE3Q8IX30 993 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms