RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 EMC10Q5UCC4 262 aa19.1■□□□□ 0.65
XRCC3-218ENST00000557439 LARGE2Q8N3Y3 721 aa19.1■□□□□ 0.65
XRCC3-218ENST00000557439 EIF1ADQ8N9N8 165 aaKnown RBP19.1■□□□□ 0.65
XRCC3-218ENST00000557439 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.1■□□□□ 0.65
XRCC3-218ENST00000557439 FEM1BQ9UK73 627 aa19.1■□□□□ 0.65
XRCC3-218ENST00000557439 TTC7AQ9ULT0 858 aaPredicted RBP19.1■□□□□ 0.65
XRCC3-218ENST00000557439 ATP8B3O60423 1300 aa19.1■□□□□ 0.65
XRCC3-218ENST00000557439 CCDC169A6NNP5 214 aa19.1■□□□□ 0.65
XRCC3-218ENST00000557439 CCDC172P0C7W6 258 aa19.1■□□□□ 0.65
XRCC3-218ENST00000557439 ADSSP30520 456 aa19.1■□□□□ 0.65
XRCC3-218ENST00000557439 PTGER2P43116 358 aa19.1■□□□□ 0.65
XRCC3-218ENST00000557439 MTMR1Q13613 665 aa19.1■□□□□ 0.65
XRCC3-218ENST00000557439 SPDYE2Q495Y8 402 aa19.1■□□□□ 0.65
XRCC3-218ENST00000557439 ZDHHC24Q6UX98 284 aa19.1■□□□□ 0.65
XRCC3-218ENST00000557439 OGFOD1Q8N543 542 aa19.1■□□□□ 0.65
XRCC3-218ENST00000557439 KCTD17Q8N5Z5 321 aa19.1■□□□□ 0.65
XRCC3-218ENST00000557439 CAPN7Q9Y6W3 813 aa19.1■□□□□ 0.65
XRCC3-218ENST00000557439 ASTN2O75129 1339 aaPredicted RBP19.1■□□□□ 0.65
XRCC3-218ENST00000557439 PLSCR1O15162 318 aa19.09■□□□□ 0.65
XRCC3-218ENST00000557439 ICAM1P05362 532 aa19.09■□□□□ 0.65
XRCC3-218ENST00000557439 QARSP47897 775 aaKnown RBP19.09■□□□□ 0.65
XRCC3-218ENST00000557439 C2CD6Q53TS8 623 aa19.09■□□□□ 0.65
XRCC3-218ENST00000557439 FAM160B2Q86V87 743 aa19.09■□□□□ 0.65
XRCC3-218ENST00000557439 PNMA2Q9UL42 364 aa19.09■□□□□ 0.65
XRCC3-218ENST00000557439 KIAA0391O15091 583 aaKnown RBP19.09■□□□□ 0.65
XRCC3-218ENST00000557439 PPP2R2AP63151 447 aa19.09■□□□□ 0.65
XRCC3-218ENST00000557439 GPC5P78333 572 aa19.09■□□□□ 0.65
XRCC3-218ENST00000557439 TRAF1Q13077 416 aa19.09■□□□□ 0.65
XRCC3-218ENST00000557439 RNF25Q96BH1 459 aaPredicted RBP19.09■□□□□ 0.65
XRCC3-218ENST00000557439 PI4K2AQ9BTU6 479 aa19.09■□□□□ 0.65
XRCC3-218ENST00000557439 NOCTQ9UK39 431 aaKnown RBP19.09■□□□□ 0.65
XRCC3-218ENST00000557439 GOLGA6L10A0A0M3HER8 536 aa19.08■□□□□ 0.65
XRCC3-218ENST00000557439 CLSTN1O94985 981 aa19.08■□□□□ 0.65
XRCC3-218ENST00000557439 CCNE2O96020 404 aa19.08■□□□□ 0.65
XRCC3-218ENST00000557439 RPL21P46778 160 aaKnown RBP19.08■□□□□ 0.65
XRCC3-218ENST00000557439 SP4Q02446 784 aa19.08■□□□□ 0.65
XRCC3-218ENST00000557439 SPRED3Q2MJR0 410 aa19.08■□□□□ 0.65
XRCC3-218ENST00000557439 XKR9Q5GH70 373 aa19.08■□□□□ 0.65
XRCC3-218ENST00000557439 LLGL2Q6P1M3 1020 aa19.08■□□□□ 0.65
XRCC3-218ENST00000557439 OTUD6BQ8N6M0 293 aa19.08■□□□□ 0.65
XRCC3-218ENST00000557439 CYFIP2Q96F07 1278 aa19.08■□□□□ 0.65
XRCC3-218ENST00000557439 GMLQ99445 158 aa19.08■□□□□ 0.65
XRCC3-218ENST00000557439 ZSWIM1Q9BR11 485 aa19.08■□□□□ 0.65
XRCC3-218ENST00000557439 TRPC6Q9Y210 931 aa19.08■□□□□ 0.65
XRCC3-218ENST00000557439 PTGIRP43119 386 aa19.08■□□□□ 0.64
XRCC3-218ENST00000557439 MTMR3Q13615 1198 aa19.08■□□□□ 0.64
XRCC3-218ENST00000557439 DAB2IPQ5VWQ8 1189 aa19.08■□□□□ 0.64
XRCC3-218ENST00000557439 RUFY4Q6ZNE9 571 aa19.08■□□□□ 0.64
XRCC3-218ENST00000557439 B4GALNT4Q76KP1 1039 aa19.08■□□□□ 0.64
XRCC3-218ENST00000557439 RHOT2Q8IXI1 618 aa19.08■□□□□ 0.64
XRCC3-218ENST00000557439 SYTL5Q8TDW5 730 aaPredicted RBP19.08■□□□□ 0.64
XRCC3-218ENST00000557439 RAPGEF5Q92565 580 aa19.08■□□□□ 0.64
XRCC3-218ENST00000557439 WNK4Q96J92 1243 aa19.08■□□□□ 0.64
XRCC3-218ENST00000557439 TXLNGYQ9BZA5 131 aa19.08■□□□□ 0.64
XRCC3-218ENST00000557439 RAB17Q9H0T7 212 aa19.08■□□□□ 0.64
XRCC3-218ENST00000557439 TMEM206Q9H813 350 aa19.08■□□□□ 0.64
XRCC3-218ENST00000557439 GRHL1Q9NZI5 618 aa19.08■□□□□ 0.64
XRCC3-218ENST00000557439 TESPA1A2RU30 521 aaPredicted RBP19.07■□□□□ 0.64
XRCC3-218ENST00000557439 PHF20L1A8MW92 1017 aa19.07■□□□□ 0.64
XRCC3-218ENST00000557439 MEFVO15553 781 aaPredicted RBP19.07■□□□□ 0.64
XRCC3-218ENST00000557439 PPFIA2O75334 1257 aa19.07■□□□□ 0.64
XRCC3-218ENST00000557439 FAM107AO95990 144 aa19.07■□□□□ 0.64
XRCC3-218ENST00000557439 MUTP22033 750 aa19.07■□□□□ 0.64
XRCC3-218ENST00000557439 FGFR4P22455 802 aa19.07■□□□□ 0.64
XRCC3-218ENST00000557439 SLCO1A2P46721 670 aa19.07■□□□□ 0.64
XRCC3-218ENST00000557439 RPS6P62753 249 aaKnown RBP19.07■□□□□ 0.64
XRCC3-218ENST00000557439 FMO1Q01740 532 aa19.07■□□□□ 0.64
XRCC3-218ENST00000557439 C1orf131Q8NDD1 294 aaKnown RBP19.07■□□□□ 0.64
XRCC3-218ENST00000557439 TAS1R2Q8TE23 839 aa19.07■□□□□ 0.64
XRCC3-218ENST00000557439 BSNDQ8WZ55 320 aa19.07■□□□□ 0.64
XRCC3-218ENST00000557439 NUP85Q9BW27 656 aa19.07■□□□□ 0.64
XRCC3-218ENST00000557439 TRIM7Q9C029 511 aa19.07■□□□□ 0.64
XRCC3-218ENST00000557439 SEMA4AQ9H3S1 761 aa19.07■□□□□ 0.64
XRCC3-218ENST00000557439 SYNPO2Q9UMS6 1093 aa19.07■□□□□ 0.64
XRCC3-218ENST00000557439 PEX5P50542 639 aa19.07■□□□□ 0.64
XRCC3-218ENST00000557439 CETN1Q12798 172 aa19.07■□□□□ 0.64
XRCC3-218ENST00000557439 RASA3Q14644 834 aa19.07■□□□□ 0.64
XRCC3-218ENST00000557439 SNRNP35Q16560 246 aaKnown RBP19.07■□□□□ 0.64
XRCC3-218ENST00000557439 LMBRD2Q68DH5 695 aaPredicted RBP19.07■□□□□ 0.64
XRCC3-218ENST00000557439 FLAD1Q8NFF5 587 aa19.07■□□□□ 0.64
XRCC3-218ENST00000557439 TATDN2Q93075 761 aa19.07■□□□□ 0.64
XRCC3-218ENST00000557439 UBIAD1Q9Y5Z9 338 aa19.07■□□□□ 0.64
XRCC3-218ENST00000557439 RPTORQ8N122 1335 aa19.07■□□□□ 0.64
XRCC3-218ENST00000557439 COL2A1P02458 1487 aaPredicted RBP19.06■□□□□ 0.64
XRCC3-218ENST00000557439 KIAA0754O94854 1291 aa19.06■□□□□ 0.64
XRCC3-218ENST00000557439 SLC29A2Q14542 456 aa19.06■□□□□ 0.64
XRCC3-218ENST00000557439 CCDC137Q6PK04 289 aaKnown RBP19.06■□□□□ 0.64
XRCC3-218ENST00000557439 ZNF653Q96CK0 615 aa19.06■□□□□ 0.64
XRCC3-218ENST00000557439 ZNFX1Q9P2E3 1918 aaKnown RBP19.06■□□□□ 0.64
XRCC3-218ENST00000557439 GMNCA6NCL1 334 aa19.06■□□□□ 0.64
XRCC3-218ENST00000557439 A6NNZ2 444 aa19.06■□□□□ 0.64
XRCC3-218ENST00000557439 SPOPO43791 374 aa19.06■□□□□ 0.64
XRCC3-218ENST00000557439 PHF2O75151 1096 aa19.06■□□□□ 0.64
XRCC3-218ENST00000557439 RTN2O75298 545 aa19.06■□□□□ 0.64
XRCC3-218ENST00000557439 CPP00450 1065 aa19.06■□□□□ 0.64
XRCC3-218ENST00000557439 EGFRP00533 1210 aa19.06■□□□□ 0.64
XRCC3-218ENST00000557439 DLATP10515 647 aaKnown RBP19.06■□□□□ 0.64
XRCC3-218ENST00000557439 SSTR3P32745 418 aaPredicted RBP19.06■□□□□ 0.64
XRCC3-218ENST00000557439 PMS2P54278 862 aa19.06■□□□□ 0.64
XRCC3-218ENST00000557439 IFI35P80217 286 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms