RNA–Protein interactions for RNA: ENST00000557349.5

TVP23C-CDRT4-204, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 2

Gene TVP23C-CDRT4, Length 1,005 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-204ENST00000557349 SV2BQ7L1I2 683 aa18.41■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 MRPL10Q7Z7H8 261 aaKnown RBP18.41■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 SMG8Q8ND04 991 aaKnown RBP18.41■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 SPIRE2Q8WWL2 714 aa18.41■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 SPATA32Q96LK8 384 aa18.41■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 NXF3Q9H4D5 531 aaKnown RBP18.41■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 PDZD7Q9H5P4 517 aa18.41■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 PARVGQ9HBI0 331 aa18.41■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 PCDHA7Q9UN72 937 aa18.41■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 USP20Q9Y2K6 914 aa18.41■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 HES2Q9Y543 173 aa18.41■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 A0A087X0B3 334 aa18.4■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 TTLL13PA6NNM8 815 aa18.4■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 H0YCG3 227 aa18.4■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 CSPG5O95196 566 aa18.4■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 EDN1P05305 212 aa18.4■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 NUCB2P80303 420 aa18.4■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 GIT2Q14161 759 aa18.4■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 CSPP1Q1MSJ5 1256 aa18.4■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 NOMO2Q5JPE7 1267 aa18.4■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 ATF7IP2Q5U623 682 aa18.4■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 SHC4Q6S5L8 630 aa18.4■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 APBB1IPQ7Z5R6 666 aaPredicted RBP18.4■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 THNSL1Q8IYQ7 743 aa18.4■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 MYCT1Q8N699 235 aa18.4■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 COLGALT1Q8NBJ5 622 aa18.4■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 P2RX5Q93086 422 aa18.4■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 CHAMP1Q96JM3 812 aa18.4■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 MRPL4Q9BYD3 311 aaKnown RBP18.4■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 TMEM134Q9H6X4 195 aa18.4■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 UBN1Q9NPG3 1134 aa18.4■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 FAM13BQ9NYF5 915 aa18.4■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 LMCD1Q9NZU5 365 aa18.4■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 MYH11P35749 1972 aa18.4■□□□□ 0.54
TVP23C-CDRT4-204ENST00000557349 K7ENM7 598 aa18.39■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 ZC3H11AO75152 810 aaKnown RBP eCLIP18.39■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 OFD1O75665 1012 aa18.39■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 POU3F3P20264 500 aaPredicted RBP18.39■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 MLH1P40692 756 aa18.39■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 DCAF4L1Q3SXM0 396 aa18.39■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 AXDND1Q5T1B0 1012 aaPredicted RBP18.39■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 LRRC55Q6ZSA7 311 aa18.39■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 DYMQ7RTS9 669 aa18.39■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 KLHL23Q8NBE8 558 aa18.39■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 DHX58Q96C10 678 aa18.39■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 MRPL38Q96DV4 380 aaKnown RBP18.39■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 ZNF558Q96NG5 402 aa18.39■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 GBP3Q9H0R5 595 aa18.39■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 CWH43Q9H720 699 aa18.39■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 ALG13Q9NP73 1137 aaKnown RBP18.39■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 TBC1D13Q9NVG8 400 aa18.39■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 RCOR1Q9UKL0 485 aa18.39■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 TRANK1O15050 2925 aa18.38■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 PPM1AP35813 382 aa18.38■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 ANP32AP39687 249 aaKnown RBP18.38■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 PBX3P40426 434 aa18.38■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 ZNF131P52739 623 aa18.38■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 NCKAP1LP55160 1127 aa18.38■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 SKIV2LQ15477 1246 aaKnown RBP18.38■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 ZNF568Q3ZCX4 644 aa18.38■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 TIGD5Q53EQ6 642 aa18.38■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 NT5DC1Q5TFE4 455 aa18.38■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 EEF1DP3Q658K8 133 aa18.38■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 TAS1R3Q7RTX0 852 aa18.38■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 FAM178BQ8IXR5 827 aa18.38■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 TMEM161BQ8NDZ6 487 aa18.38■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 LEO1Q8WVC0 666 aaPredicted RBP18.38■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 DDX12PQ92771 950 aa18.38■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 NTPCRQ9BSD7 190 aaKnown RBP18.38■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 LMAN2LQ9H0V9 348 aa18.38■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 RNF39Q9H2S5 420 aa18.38■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 CUEDC2Q9H467 287 aa18.38■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 PARP2Q9UGN5 583 aa18.38■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 PLAGL2Q9UPG8 496 aa18.38■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 GRM6O15303 877 aa18.37■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 TRAK2O60296 914 aa18.37■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 ITGB1P05556 798 aa18.37■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 MAPTP10636 758 aaKnown RBP18.37■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 AKAP5P24588 427 aa18.37■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 RESP18Q5W5W9 173 aa18.37■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 KCNT2Q6UVM3 1135 aa18.37■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 HAUS6Q7Z4H7 955 aa18.37■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 IQUBQ8NA54 791 aa18.37■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 BICD1Q96G01 975 aa18.37■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 FAM193BQ96PV7 902 aaPredicted RBP18.37■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 RPS6KC1Q96S38 1066 aa18.37■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 GAD1Q99259 594 aa18.37■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 TARS2Q9BW92 718 aaKnown RBP18.37■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 SCAND2PQ9GZW5 306 aaPredicted RBP18.37■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 KANSL3Q9P2N6 904 aa18.37■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 TNFSF13BQ9Y275 285 aa18.37■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 GIT1Q9Y2X7 761 aa18.37■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 ARL5CA6NH57 179 aa18.36■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 MYMKA6NI61 221 aa18.36■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 FGF18O76093 207 aa18.36■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 POMCP01189 267 aa18.36■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 IDEP14735 1019 aa18.36■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 ALDH7A1P49419 539 aaKnown RBP18.36■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 SCNN1GP51170 649 aa18.36■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 E2F4Q16254 413 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms