RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 POLIQ9UNA4 740 aa14.17□□□□□ -0.14
PSEN1-220ENST00000557037 PIN4Q9Y237 131 aaKnown RBP14.17□□□□□ -0.14
PSEN1-220ENST00000557037 SMG1Q96Q15 3661 aaKnown RBP14.17□□□□□ -0.14
PSEN1-220ENST00000557037 SALL3Q9BXA9 1300 aa14.16□□□□□ -0.14
PSEN1-220ENST00000557037 CCL16O15467 120 aa14.16□□□□□ -0.14
PSEN1-220ENST00000557037 SKIP12755 728 aa14.16□□□□□ -0.14
PSEN1-220ENST00000557037 HOXC13P31276 330 aa14.16□□□□□ -0.14
PSEN1-220ENST00000557037 MFAP1P55081 439 aaKnown RBP14.16□□□□□ -0.14
PSEN1-220ENST00000557037 DSG1Q02413 1049 aa14.16□□□□□ -0.14
PSEN1-220ENST00000557037 TROAPQ12815 778 aa14.16□□□□□ -0.14
PSEN1-220ENST00000557037 IMMTQ16891 758 aaKnown RBP14.16□□□□□ -0.14
PSEN1-220ENST00000557037 AGMOQ6ZNB7 445 aa14.16□□□□□ -0.14
PSEN1-220ENST00000557037 PGBD1Q96JS3 809 aa14.16□□□□□ -0.14
PSEN1-220ENST00000557037 CNNM2Q9H8M5 875 aa14.16□□□□□ -0.14
PSEN1-220ENST00000557037 SEC63Q9UGP8 760 aaKnown RBP14.16□□□□□ -0.14
PSEN1-220ENST00000557037 ASXL3Q9C0F0 2248 aa14.16□□□□□ -0.14
PSEN1-220ENST00000557037 CNR2P34972 360 aa14.15□□□□□ -0.14
PSEN1-220ENST00000557037 OR1G1P47890 313 aa14.15□□□□□ -0.14
PSEN1-220ENST00000557037 GAS6Q14393 721 aa14.15□□□□□ -0.14
PSEN1-220ENST00000557037 CEP55Q53EZ4 464 aa14.15□□□□□ -0.14
PSEN1-220ENST00000557037 C20orf194Q5TEA3 1177 aa14.15□□□□□ -0.14
PSEN1-220ENST00000557037 RNF43Q68DV7 783 aa14.15□□□□□ -0.14
PSEN1-220ENST00000557037 LONP2Q86WA8 852 aa14.15□□□□□ -0.14
PSEN1-220ENST00000557037 NPAS3Q8IXF0 933 aa14.15□□□□□ -0.14
PSEN1-220ENST00000557037 TRAIPQ9BWF2 469 aa14.15□□□□□ -0.14
PSEN1-220ENST00000557037 GCOM2Q9BZD3 368 aaPredicted RBP14.15□□□□□ -0.14
PSEN1-220ENST00000557037 PCDHB2Q9Y5E7 798 aa14.15□□□□□ -0.14
PSEN1-220ENST00000557037 ADAMTS20P59510 1910 aa14.14□□□□□ -0.15
PSEN1-220ENST00000557037 hCG_1642624A0A1W2PR95 340 aa14.14□□□□□ -0.15
PSEN1-220ENST00000557037 CYSRT1A8MQ03 144 aa14.14□□□□□ -0.15
PSEN1-220ENST00000557037 MAN2B1O00754 1011 aa14.14□□□□□ -0.15
PSEN1-220ENST00000557037 IFIT3O14879 490 aaKnown RBP14.14□□□□□ -0.15
PSEN1-220ENST00000557037 ZNF623O75123 536 aa14.14□□□□□ -0.15
PSEN1-220ENST00000557037 TCEAL6Q6IPX3 200 aa14.14□□□□□ -0.15
PSEN1-220ENST00000557037 KIAA1211LQ6NV74 962 aa14.14□□□□□ -0.15
PSEN1-220ENST00000557037 RNF168Q8IYW5 571 aaPredicted RBP14.14□□□□□ -0.15
PSEN1-220ENST00000557037 TCEAL3Q969E4 200 aa14.14□□□□□ -0.15
PSEN1-220ENST00000557037 PGBD4Q96DM1 585 aa14.14□□□□□ -0.15
PSEN1-220ENST00000557037 MCRS1Q96EZ8 462 aa14.14□□□□□ -0.15
PSEN1-220ENST00000557037 IER2Q9BTL4 223 aa14.14□□□□□ -0.15
PSEN1-220ENST00000557037 SPZ1Q9BXG8 430 aa14.14□□□□□ -0.15
PSEN1-220ENST00000557037 RSAD1Q9HA92 442 aa14.14□□□□□ -0.15
PSEN1-220ENST00000557037 LY9Q9HBG7 655 aa14.14□□□□□ -0.15
PSEN1-220ENST00000557037 HCFC1R1Q9NWW0 138 aa14.14□□□□□ -0.15
PSEN1-220ENST00000557037 CEP131Q9UPN4 1083 aa14.14□□□□□ -0.15
PSEN1-220ENST00000557037 MAFBQ9Y5Q3 323 aaPredicted RBP14.14□□□□□ -0.15
PSEN1-220ENST00000557037 CACNA1EQ15878 2313 aa14.13□□□□□ -0.15
PSEN1-220ENST00000557037 K7ESF4 209 aa14.13□□□□□ -0.15
PSEN1-220ENST00000557037 EFEMP2O95967 443 aa14.13□□□□□ -0.15
PSEN1-220ENST00000557037 RAB27AP51159 221 aa14.13□□□□□ -0.15
PSEN1-220ENST00000557037 DRP2Q13474 957 aa14.13□□□□□ -0.15
PSEN1-220ENST00000557037 GRM2Q14416 872 aa14.13□□□□□ -0.15
PSEN1-220ENST00000557037 PPM1LQ5SGD2 360 aa14.13□□□□□ -0.15
PSEN1-220ENST00000557037 TANGO2Q6ICL3 276 aa14.13□□□□□ -0.15
PSEN1-220ENST00000557037 PDZD3Q86UT5 571 aa14.13□□□□□ -0.15
PSEN1-220ENST00000557037 ZNF710Q8N1W2 664 aa14.13□□□□□ -0.15
PSEN1-220ENST00000557037 FAM3CQ92520 227 aa14.13□□□□□ -0.15
PSEN1-220ENST00000557037 RILPL2Q969X0 211 aa14.13□□□□□ -0.15
PSEN1-220ENST00000557037 C2orf42Q9NWW7 574 aa14.13□□□□□ -0.15
PSEN1-220ENST00000557037 GABBR1Q9UBS5 961 aa14.13□□□□□ -0.15
PSEN1-220ENST00000557037 NOTCH4Q99466 2003 aa14.12□□□□□ -0.15
PSEN1-220ENST00000557037 MYO18BQ8IUG5 2567 aa14.12□□□□□ -0.15
PSEN1-220ENST00000557037 A0A087WZ62 844 aa14.12□□□□□ -0.15
PSEN1-220ENST00000557037 C4orf47A7E2U8 309 aa14.12□□□□□ -0.15
PSEN1-220ENST00000557037 MEIS1O00470 390 aa14.12□□□□□ -0.15
PSEN1-220ENST00000557037 DHX15O43143 795 aaKnown RBP14.12□□□□□ -0.15
PSEN1-220ENST00000557037 ECI2O75521 394 aa14.12□□□□□ -0.15
PSEN1-220ENST00000557037 EPN2O95208 641 aa14.12□□□□□ -0.15
PSEN1-220ENST00000557037 SFPQP23246 707 aaKnown RBP eCLIP14.12□□□□□ -0.15
PSEN1-220ENST00000557037 PDE1AP54750 535 aa14.12□□□□□ -0.15
PSEN1-220ENST00000557037 SH3PXD2AQ5TCZ1 1133 aa14.12□□□□□ -0.15
PSEN1-220ENST00000557037 LIN9Q5TKA1 542 aa14.12□□□□□ -0.15
PSEN1-220ENST00000557037 PRSS55Q6UWB4 352 aaPredicted RBP14.12□□□□□ -0.15
PSEN1-220ENST00000557037 CATSPER4Q7RTX7 472 aa14.12□□□□□ -0.15
PSEN1-220ENST00000557037 CATIPQ7Z7H3 387 aa14.12□□□□□ -0.15
PSEN1-220ENST00000557037 COLGALT2Q8IYK4 626 aa14.12□□□□□ -0.15
PSEN1-220ENST00000557037 CMTR1Q8N1G2 835 aaKnown RBP14.12□□□□□ -0.15
PSEN1-220ENST00000557037 SPEM1Q8N4L4 309 aa14.12□□□□□ -0.15
PSEN1-220ENST00000557037 DNASE1L2Q92874 299 aa14.12□□□□□ -0.15
PSEN1-220ENST00000557037 FDXACB1Q9BRP7 624 aaPredicted RBP14.12□□□□□ -0.15
PSEN1-220ENST00000557037 GPR62Q9BZJ7 368 aa14.12□□□□□ -0.15
PSEN1-220ENST00000557037 BRD9Q9H8M2 597 aa14.12□□□□□ -0.15
PSEN1-220ENST00000557037 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.12□□□□□ -0.15
PSEN1-220ENST00000557037 CHST7Q9NS84 486 aa14.12□□□□□ -0.15
PSEN1-220ENST00000557037 KANSL3Q9P2N6 904 aa14.12□□□□□ -0.15
PSEN1-220ENST00000557037 FBXW11Q9UKB1 542 aa14.12□□□□□ -0.15
PSEN1-220ENST00000557037 XYLBO75191 536 aa14.11□□□□□ -0.15
PSEN1-220ENST00000557037 PLEKHA8P1O95397 391 aa14.11□□□□□ -0.15
PSEN1-220ENST00000557037 C1RP00736 705 aa14.11□□□□□ -0.15
PSEN1-220ENST00000557037 C8AP07357 584 aa14.11□□□□□ -0.15
PSEN1-220ENST00000557037 HNRNPA1P09651 372 aaKnown RBP eCLIP14.11□□□□□ -0.15
PSEN1-220ENST00000557037 CHRNB1P11230 501 aa14.11□□□□□ -0.15
PSEN1-220ENST00000557037 SDSP20132 328 aa14.11□□□□□ -0.15
PSEN1-220ENST00000557037 LAMA1P25391 3075 aa14.11□□□□□ -0.15
PSEN1-220ENST00000557037 ZNF76P36508 570 aa14.11□□□□□ -0.15
PSEN1-220ENST00000557037 POTEHQ6S545 545 aa14.11□□□□□ -0.15
PSEN1-220ENST00000557037 CWC27Q6UX04 472 aaKnown RBP14.11□□□□□ -0.15
PSEN1-220ENST00000557037 KBTBD6Q86V97 674 aa14.11□□□□□ -0.15
PSEN1-220ENST00000557037 MBOAT7Q96N66 472 aa14.11□□□□□ -0.15
PSEN1-220ENST00000557037 RBM12Q9NTZ6 932 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms