RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 ENAHQ8N8S7 591 aaPredicted RBP12.72□□□□□ -0.37
NEK9-210ENST00000557026 SOCS4Q8WXH5 440 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 SLITRK1Q96PX8 696 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 UIMC1Q96RL1 719 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 MKNK1Q9BUB5 465 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 PCDHB7Q9Y5E2 793 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 CPS1P31327 1500 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 TTC36A6NLP5 189 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 ARL4DP49703 201 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 GMPSP49915 693 aaPredicted RBP12.72□□□□□ -0.37
NEK9-210ENST00000557026 MB21D2Q8IYB1 491 aaPredicted RBP12.72□□□□□ -0.37
NEK9-210ENST00000557026 STAG2Q8N3U4 1231 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 NSUN4Q96CB9 384 aaKnown RBP12.72□□□□□ -0.37
NEK9-210ENST00000557026 DPH5Q9H2P9 285 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 SH3BP1Q9Y3L3 701 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 CDC42BPBQ9Y5S2 1711 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 LGALS16A8MUM7 142 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 M0QYV0 167 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 CELF2O95319 508 aaKnown RBP12.72□□□□□ -0.37
NEK9-210ENST00000557026 KPNA1P52294 538 aaPredicted RBP12.72□□□□□ -0.37
NEK9-210ENST00000557026 MTMR2Q13614 643 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 MAPRE2Q15555 327 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 ZNF746Q6NUN9 644 aaPredicted RBP12.72□□□□□ -0.37
NEK9-210ENST00000557026 FAF2Q96CS3 445 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 SPATA16Q9BXB7 569 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 KANSL3Q9P2N6 904 aa12.72□□□□□ -0.37
NEK9-210ENST00000557026 PIN4Q9Y237 131 aaKnown RBP12.72□□□□□ -0.37
NEK9-210ENST00000557026 REREQ9P2R6 1566 aa12.71□□□□□ -0.37
NEK9-210ENST00000557026 LRRN2O75325 713 aa12.71□□□□□ -0.37
NEK9-210ENST00000557026 TFRCP02786 760 aaKnown RBP12.71□□□□□ -0.37
NEK9-210ENST00000557026 NR3C2P08235 984 aa12.71□□□□□ -0.37
NEK9-210ENST00000557026 ALDH1A3P47895 512 aa12.71□□□□□ -0.37
NEK9-210ENST00000557026 P3H1Q32P28 736 aa12.71□□□□□ -0.37
NEK9-210ENST00000557026 EFL1Q7Z2Z2 1120 aaKnown RBP12.71□□□□□ -0.37
NEK9-210ENST00000557026 WDR75Q8IWA0 830 aaKnown RBP12.71□□□□□ -0.37
NEK9-210ENST00000557026 GBP7Q8N8V2 638 aaPredicted RBP12.71□□□□□ -0.37
NEK9-210ENST00000557026 LZICQ8WZA0 190 aa12.71□□□□□ -0.37
NEK9-210ENST00000557026 SKA1Q96BD8 255 aa12.71□□□□□ -0.37
NEK9-210ENST00000557026 CATSPERBQ9H7T0 1116 aa12.71□□□□□ -0.37
NEK9-210ENST00000557026 CDC42BPAQ5VT25 1732 aa12.71□□□□□ -0.37
NEK9-210ENST00000557026 FAM187AA6NFU0 413 aa12.71□□□□□ -0.37
NEK9-210ENST00000557026 STRNO43815 780 aa12.71□□□□□ -0.37
NEK9-210ENST00000557026 CABYRO75952 493 aa12.71□□□□□ -0.37
NEK9-210ENST00000557026 SAT1P21673 171 aa12.71□□□□□ -0.37
NEK9-210ENST00000557026 PSMA3P25788 255 aa12.71□□□□□ -0.37
NEK9-210ENST00000557026 ANGEL2Q5VTE6 544 aaKnown RBP12.71□□□□□ -0.37
NEK9-210ENST00000557026 EMBQ6PCB8 327 aa12.71□□□□□ -0.37
NEK9-210ENST00000557026 FAM133AQ8N9E0 248 aa12.71□□□□□ -0.37
NEK9-210ENST00000557026 FBXO41Q8TF61 875 aa12.71□□□□□ -0.37
NEK9-210ENST00000557026 EIF2AK1Q9BQI3 630 aaKnown RBP12.71□□□□□ -0.37
NEK9-210ENST00000557026 TXLNGQ9NUQ3 528 aa12.71□□□□□ -0.37
NEK9-210ENST00000557026 C17orf102A2RUQ5 167 aa12.71□□□□□ -0.38
NEK9-210ENST00000557026 GOLGA8IPA6NC78 632 aa12.71□□□□□ -0.38
NEK9-210ENST00000557026 INPP1P49441 399 aa12.71□□□□□ -0.38
NEK9-210ENST00000557026 VPS41P49754 854 aa12.71□□□□□ -0.38
NEK9-210ENST00000557026 RPL10AP62906 217 aaKnown RBP12.71□□□□□ -0.38
NEK9-210ENST00000557026 COASYQ13057 564 aa12.71□□□□□ -0.38
NEK9-210ENST00000557026 VSTM4Q8IW00 320 aa12.71□□□□□ -0.38
NEK9-210ENST00000557026 MCUQ8NE86 351 aa12.71□□□□□ -0.38
NEK9-210ENST00000557026 MOSPD1Q9UJG1 213 aa12.71□□□□□ -0.38
NEK9-210ENST00000557026 A0A1W2PQC6 194 aa12.71□□□□□ -0.38
NEK9-210ENST00000557026 E5RI56 91 aa12.71□□□□□ -0.38
NEK9-210ENST00000557026 TMEM132DQ14C87 1099 aa12.71□□□□□ -0.38
NEK9-210ENST00000557026 TTC19Q6DKK2 380 aaPredicted RBP12.71□□□□□ -0.38
NEK9-210ENST00000557026 CALML6Q8TD86 181 aa12.71□□□□□ -0.38
NEK9-210ENST00000557026 FAM213AQ9BRX8 229 aa12.71□□□□□ -0.38
NEK9-210ENST00000557026 GBA2Q9HCG7 927 aaPredicted RBP12.71□□□□□ -0.38
NEK9-210ENST00000557026 PCDHA13Q9Y5I0 950 aa12.71□□□□□ -0.38
NEK9-210ENST00000557026 PTPRMP28827 1452 aa12.7□□□□□ -0.38
NEK9-210ENST00000557026 PI4K2BG5E9Z4 385 aa12.7□□□□□ -0.38
NEK9-210ENST00000557026 GADD45BO75293 160 aaPredicted RBP12.7□□□□□ -0.38
NEK9-210ENST00000557026 GNA15P30679 374 aa12.7□□□□□ -0.38
NEK9-210ENST00000557026 PSMC1P62191 440 aaKnown RBP12.7□□□□□ -0.38
NEK9-210ENST00000557026 DR1Q01658 176 aa12.7□□□□□ -0.38
NEK9-210ENST00000557026 EHD4Q9H223 541 aa12.7□□□□□ -0.38
NEK9-210ENST00000557026 UBQLN1Q9UMX0 589 aaKnown RBP12.7□□□□□ -0.38
NEK9-210ENST00000557026 ZC3H4Q9UPT8 1303 aaKnown RBP12.7□□□□□ -0.38
NEK9-210ENST00000557026 DYNC1LI2O43237 492 aaPredicted RBP12.7□□□□□ -0.38
NEK9-210ENST00000557026 YWHABP31946 246 aaKnown RBP12.7□□□□□ -0.38
NEK9-210ENST00000557026 LRRC41Q15345 812 aa12.7□□□□□ -0.38
NEK9-210ENST00000557026 ACAD11Q709F0 780 aa12.7□□□□□ -0.38
NEK9-210ENST00000557026 NRBF2Q96F24 287 aa12.7□□□□□ -0.38
NEK9-210ENST00000557026 TMEM169Q96HH4 297 aa12.7□□□□□ -0.38
NEK9-210ENST00000557026 NHEJ1Q9H9Q4 299 aaPredicted RBP12.7□□□□□ -0.38
NEK9-210ENST00000557026 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.7□□□□□ -0.38
NEK9-210ENST00000557026 EXOC1LA0A1B0GW35 172 aa12.7□□□□□ -0.38
NEK9-210ENST00000557026 ESRRBO95718 433 aa12.7□□□□□ -0.38
NEK9-210ENST00000557026 EIF4A3P38919 411 aaKnown RBP12.7□□□□□ -0.38
NEK9-210ENST00000557026 GUCY2DQ02846 1103 aa12.7□□□□□ -0.38
NEK9-210ENST00000557026 SCARA5Q6ZMJ2 495 aa12.7□□□□□ -0.38
NEK9-210ENST00000557026 SH3KBP1Q96B97 665 aa12.7□□□□□ -0.38
NEK9-210ENST00000557026 DDX27Q96GQ7 796 aaKnown RBP12.7□□□□□ -0.38
NEK9-210ENST00000557026 UVRAGQ9P2Y5 699 aa12.7□□□□□ -0.38
NEK9-210ENST00000557026 FAM50BQ9Y247 325 aa12.7□□□□□ -0.38
NEK9-210ENST00000557026 GPR75-ASB3A0A0A6YYF3 556 aa12.7□□□□□ -0.38
NEK9-210ENST00000557026 SLC16A4O15374 487 aa12.7□□□□□ -0.38
NEK9-210ENST00000557026 ATP5HO75947 161 aa12.7□□□□□ -0.38
NEK9-210ENST00000557026 CYP2C9P11712 490 aa12.7□□□□□ -0.38
NEK9-210ENST00000557026 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.7□□□□□ -0.38
NEK9-210ENST00000557026 EFHC1Q5JVL4 640 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms