RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 SLC7A3Q8WY07 619 aa10.11□□□□□ -0.79
HNRNPC-227ENST00000556897 TMEM143Q96AN5 459 aa10.11□□□□□ -0.79
HNRNPC-227ENST00000556897 ZNF707Q96C28 371 aaPredicted RBP10.11□□□□□ -0.79
HNRNPC-227ENST00000556897 B3GALT6Q96L58 329 aa10.11□□□□□ -0.79
HNRNPC-227ENST00000556897 HINFPQ9BQA5 517 aa10.11□□□□□ -0.79
HNRNPC-227ENST00000556897 JPH2Q9BR39 696 aaPredicted RBP10.11□□□□□ -0.79
HNRNPC-227ENST00000556897 HERC2P3Q9BVR0 1158 aa10.11□□□□□ -0.79
HNRNPC-227ENST00000556897 RNF26Q9BY78 433 aaPredicted RBP10.11□□□□□ -0.79
HNRNPC-227ENST00000556897 RHOBTB2Q9BYZ6 727 aa10.11□□□□□ -0.79
HNRNPC-227ENST00000556897 PIDD1Q9HB75 910 aa10.11□□□□□ -0.79
HNRNPC-227ENST00000556897 DPP7Q9UHL4 492 aa10.11□□□□□ -0.79
HNRNPC-227ENST00000556897 SSX2IPQ9Y2D8 614 aa10.11□□□□□ -0.79
HNRNPC-227ENST00000556897 NID2Q14112 1375 aa10.11□□□□□ -0.79
HNRNPC-227ENST00000556897 EPG5Q9HCE0 2579 aa10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 F8W810 466 aa10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 EML1O00423 815 aa10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 SP9P0CG40 484 aa10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 LAMP2P13473 410 aa10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 NCLP19338 710 aaKnown RBP10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 MLH1P40692 756 aa10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 BMP2KLQ5H9B9 411 aa10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 ZC3H14Q6PJT7 736 aaKnown RBP10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 POTEGQ6S5H5 508 aa10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 CYP26C1Q6V0L0 522 aa10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 GET4Q7L5D6 327 aaPredicted RBP10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 SRGAP1Q7Z6B7 1085 aa10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 SKAP1Q86WV1 359 aa10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 PALB2Q86YC2 1186 aa10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 RNF168Q8IYW5 571 aaPredicted RBP10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 SMG8Q8ND04 991 aaKnown RBP10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 SPDYE1Q8NFV5 336 aaPredicted RBP10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 ETNPPLQ8TBG4 499 aa10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 PRPF31Q8WWY3 499 aaKnown RBP10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 NXPE3Q969Y0 559 aa10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 JAKMIP1Q96N16 626 aaKnown RBP10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 GAD1Q99259 594 aa10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 RXFP1Q9HBX9 757 aa10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 ARHGEF3Q9NR81 526 aa10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 BMP2KQ9NSY1 1161 aaPredicted RBP10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 DLGAP2Q9P1A6 1054 aa10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 SIT1Q9Y3P8 196 aa10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 HES2Q9Y543 173 aa10.1□□□□□ -0.79
HNRNPC-227ENST00000556897 FRYLO94915 3013 aa10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 CYP3A7-CYP3A51PA0A087WV96 503 aa10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 ARL5CA6NH57 179 aa10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 TGM5O43548 720 aa10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 GAS2O43903 313 aaKnown RBP10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 EFEMP2O95967 443 aa10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 ITGA4P13612 1032 aa10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 IFNAR1P17181 557 aa10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 CYP3A7P24462 503 aa10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 QARSP47897 775 aaKnown RBP10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 CCT2P78371 535 aaKnown RBP10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 DSG1Q02413 1049 aa10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 DSC1Q08554 894 aa10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 LAMTOR4Q0VGL1 99 aa10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 HTR4Q13639 388 aa10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 PUM1Q14671 1186 aaKnown RBP eCLIP10.09□□□□□ -0.796e-12■□□□□ 10.8
HNRNPC-227ENST00000556897 PHLDB3Q6NSJ2 640 aa10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 DCLRE1AQ6PJP8 1040 aa10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 GLYCTKQ8IVS8 523 aa10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 C1orf210Q8IVY1 113 aa10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 DCLK2Q8N568 766 aa10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 RNF149Q8NC42 400 aa10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 PSPC1Q8WXF1 523 aaKnown RBP10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 RUBCNQ92622 972 aa10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 CEP170P1Q96L14 293 aa10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 ZFP42Q96MM3 310 aa10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 EIF2AQ9BY44 585 aaKnown RBP10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 FOXQ1Q9C009 403 aa10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 NT5C3AQ9H0P0 336 aa10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 DHX33Q9H6R0 707 aaKnown RBP10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 NCOA5Q9HCD5 579 aaKnown RBP10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 SH3GLB2Q9NR46 395 aa10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 WRAP73Q9P2S5 460 aaPredicted RBP10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 DDX25Q9UHL0 483 aaKnown RBP10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 PCDHA4Q9UN74 947 aa10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 IPPQ9Y573 584 aa10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 NUMBLQ9Y6R0 609 aa10.09□□□□□ -0.79
HNRNPC-227ENST00000556897 DOCK6Q96HP0 2047 aa10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 POTEMA6NI47 508 aa10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 ANHXE9PGG2 379 aa10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 SLC37A4O43826 429 aa10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 TSPAN1O60635 241 aa10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 LRRN2O75325 713 aa10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 ERLIN2O94905 339 aa10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 PAPLNO95428 1278 aa10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 GLULP15104 373 aa10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 RPL17P18621 184 aaKnown RBP10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 SCNN1GP51170 649 aa10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 BLOC1S2Q6QNY1 142 aa10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 FERMT3Q86UX7 667 aa10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 CNNM3Q8NE01 707 aa10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 PJA1Q8NG27 643 aa10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 HDAC7Q8WUI4 952 aa10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 MBOAT7Q96N66 472 aa10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 RPP25Q9BUL9 199 aaKnown RBP10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 APOL6Q9BWW8 343 aa10.08□□□□□ -0.8
HNRNPC-227ENST00000556897 C22orf23Q9BZE7 217 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms