RNA–Protein interactions for RNA: ENST00000556853.5

CNOT10-219, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 4

Gene CNOT10, Length 551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-219ENST00000556853 PRB1P04280 392 aa13.85□□□□□ -0.19
CNOT10-219ENST00000556853 SKIP12755 728 aa13.85□□□□□ -0.19
CNOT10-219ENST00000556853 ATP4AP20648 1035 aa13.85□□□□□ -0.19
CNOT10-219ENST00000556853 ZNF710Q8N1W2 664 aa13.85□□□□□ -0.19
CNOT10-219ENST00000556853 LINC01465Q8N7H1 131 aa13.85□□□□□ -0.19
CNOT10-219ENST00000556853 PI4K2BQ8TCG2 481 aa13.85□□□□□ -0.19
CNOT10-219ENST00000556853 HNRNPLLQ8WVV9 542 aaKnown RBP13.85□□□□□ -0.19
CNOT10-219ENST00000556853 ZNF668Q96K58 619 aaPredicted RBP13.85□□□□□ -0.19
CNOT10-219ENST00000556853 CHST7Q9NS84 486 aa13.85□□□□□ -0.19
CNOT10-219ENST00000556853 ZBTB40Q9NUA8 1239 aa13.85□□□□□ -0.19
CNOT10-219ENST00000556853 C2orf42Q9NWW7 574 aa13.85□□□□□ -0.19
CNOT10-219ENST00000556853 FNIP2Q9P278 1114 aa13.85□□□□□ -0.19
CNOT10-219ENST00000556853 AKT3Q9Y243 479 aa13.85□□□□□ -0.19
CNOT10-219ENST00000556853 ZNF623O75123 536 aa13.84□□□□□ -0.19
CNOT10-219ENST00000556853 RPP40O75818 363 aaKnown RBP13.84□□□□□ -0.19
CNOT10-219ENST00000556853 C1QL1O75973 258 aa13.84□□□□□ -0.19
CNOT10-219ENST00000556853 SEC24BO95487 1268 aa13.84□□□□□ -0.19
CNOT10-219ENST00000556853 HNRNPA1P09651 372 aaKnown RBP eCLIP13.84□□□□□ -0.19
CNOT10-219ENST00000556853 FGD1P98174 961 aa13.84□□□□□ -0.19
CNOT10-219ENST00000556853 GLYCTKQ8IVS8 523 aa13.84□□□□□ -0.19
CNOT10-219ENST00000556853 URGCPQ8TCY9 931 aa13.84□□□□□ -0.19
CNOT10-219ENST00000556853 LRIG1Q96JA1 1093 aa13.84□□□□□ -0.19
CNOT10-219ENST00000556853 ZC3H10Q96K80 434 aaKnown RBP13.84□□□□□ -0.19
CNOT10-219ENST00000556853 FAM193BQ96PV7 902 aaPredicted RBP13.84□□□□□ -0.19
CNOT10-219ENST00000556853 HNRNPABQ99729 332 aaKnown RBP13.84□□□□□ -0.19
CNOT10-219ENST00000556853 SDF4Q9BRK5 362 aa13.84□□□□□ -0.19
CNOT10-219ENST00000556853 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.84□□□□□ -0.19
CNOT10-219ENST00000556853 HELLSQ9NRZ9 838 aa13.84□□□□□ -0.19
CNOT10-219ENST00000556853 KCNH7Q9NS40 1196 aa13.84□□□□□ -0.19
CNOT10-219ENST00000556853 FAM105AQ9NUU6 356 aa13.84□□□□□ -0.19
CNOT10-219ENST00000556853 KCNH3Q9ULD8 1083 aa13.84□□□□□ -0.19
CNOT10-219ENST00000556853 TTC41PQ6P2S7 1318 aa13.84□□□□□ -0.19
CNOT10-219ENST00000556853 FREM2Q5SZK8 3169 aa13.83□□□□□ -0.19
CNOT10-219ENST00000556853 LNP1A1A4G5 178 aa13.83□□□□□ -0.2
CNOT10-219ENST00000556853 BACH1O14867 736 aa13.83□□□□□ -0.2
CNOT10-219ENST00000556853 GPC3P51654 580 aa13.83□□□□□ -0.2
CNOT10-219ENST00000556853 AFF1P51825 1210 aaKnown RBP13.83□□□□□ -0.2
CNOT10-219ENST00000556853 FAM160B1Q5W0V3 765 aa13.83□□□□□ -0.2
CNOT10-219ENST00000556853 TANGO2Q6ICL3 276 aa13.83□□□□□ -0.2
CNOT10-219ENST00000556853 POTEHQ6S545 545 aa13.83□□□□□ -0.2
CNOT10-219ENST00000556853 ABHD15Q6UXT9 468 aa13.83□□□□□ -0.2
CNOT10-219ENST00000556853 CCDC60Q8IWA6 550 aaPredicted RBP13.83□□□□□ -0.2
CNOT10-219ENST00000556853 GPR65Q8IYL9 337 aa13.83□□□□□ -0.2
CNOT10-219ENST00000556853 DEFB124Q8NES8 71 aa13.83□□□□□ -0.2
CNOT10-219ENST00000556853 ELSPBP1Q96BH3 223 aa13.83□□□□□ -0.2
CNOT10-219ENST00000556853 MAP7D2Q96T17 732 aa13.83□□□□□ -0.2
CNOT10-219ENST00000556853 MKNK1Q9BUB5 465 aa13.83□□□□□ -0.2
CNOT10-219ENST00000556853 BRD9Q9H8M2 597 aa13.83□□□□□ -0.2
CNOT10-219ENST00000556853 TRPV5Q9NQA5 729 aa13.83□□□□□ -0.2
CNOT10-219ENST00000556853 ZSWIM5Q9P217 1185 aa13.83□□□□□ -0.2
CNOT10-219ENST00000556853 FBXW11Q9UKB1 542 aa13.83□□□□□ -0.2
CNOT10-219ENST00000556853 PIAS3Q9Y6X2 628 aa13.83□□□□□ -0.2
CNOT10-219ENST00000556853 B4E1Z4 1266 aa13.82□□□□□ -0.2
CNOT10-219ENST00000556853 CCL16O15467 120 aa13.82□□□□□ -0.2
CNOT10-219ENST00000556853 CSDE1O75534 798 aaKnown RBP13.82□□□□□ -0.2
CNOT10-219ENST00000556853 HOXA9P31269 272 aa13.82□□□□□ -0.2
CNOT10-219ENST00000556853 GRM2Q14416 872 aa13.82□□□□□ -0.2
CNOT10-219ENST00000556853 PPM1LQ5SGD2 360 aa13.82□□□□□ -0.2
CNOT10-219ENST00000556853 TWF2Q6IBS0 349 aaKnown RBP13.82□□□□□ -0.2
CNOT10-219ENST00000556853 EFCAB12Q6NXP0 572 aa13.82□□□□□ -0.2
CNOT10-219ENST00000556853 PDXDC2PQ6P474 469 aa13.82□□□□□ -0.2
CNOT10-219ENST00000556853 AGMOQ6ZNB7 445 aa13.82□□□□□ -0.2
CNOT10-219ENST00000556853 Q6ZS52 159 aa13.82□□□□□ -0.2
CNOT10-219ENST00000556853 MAP4K3Q8IVH8 894 aa13.82□□□□□ -0.2
CNOT10-219ENST00000556853 ING5Q8WYH8 240 aa13.82□□□□□ -0.2
CNOT10-219ENST00000556853 MCRS1Q96EZ8 462 aa13.82□□□□□ -0.2
CNOT10-219ENST00000556853 ZNF302Q9NR11 478 aa13.82□□□□□ -0.2
CNOT10-219ENST00000556853 RBM12Q9NTZ6 932 aaKnown RBP13.82□□□□□ -0.2
CNOT10-219ENST00000556853 KANSL3Q9P2N6 904 aa13.82□□□□□ -0.2
CNOT10-219ENST00000556853 PRG3Q9Y2Y8 225 aaPredicted RBP13.82□□□□□ -0.2
CNOT10-219ENST00000556853 RAI2Q9Y5P3 530 aa13.82□□□□□ -0.2
CNOT10-219ENST00000556853 ASXL3Q9C0F0 2248 aa13.82□□□□□ -0.2
CNOT10-219ENST00000556853 LAMA1P25391 3075 aa13.82□□□□□ -0.2
CNOT10-219ENST00000556853 CDX4O14627 284 aaPredicted RBP13.81□□□□□ -0.2
CNOT10-219ENST00000556853 MAGEB2O15479 319 aa13.81□□□□□ -0.2
CNOT10-219ENST00000556853 CCNE2O96020 404 aa13.81□□□□□ -0.2
CNOT10-219ENST00000556853 CCDC192P0DO97 292 aa13.81□□□□□ -0.2
CNOT10-219ENST00000556853 RPL17P18621 184 aaKnown RBP13.81□□□□□ -0.2
CNOT10-219ENST00000556853 CCNE1P24864 410 aa13.81□□□□□ -0.2
CNOT10-219ENST00000556853 RAB27AP51159 221 aa13.81□□□□□ -0.2
CNOT10-219ENST00000556853 SCAPQ12770 1279 aa13.81□□□□□ -0.2
CNOT10-219ENST00000556853 ITGB3BPQ13352 177 aaPredicted RBP13.81□□□□□ -0.2
CNOT10-219ENST00000556853 LRRC32Q14392 662 aa13.81□□□□□ -0.2
CNOT10-219ENST00000556853 IFIT1BQ5T764 474 aaKnown RBP13.81□□□□□ -0.2
CNOT10-219ENST00000556853 LRRC71Q8N4P6 559 aa13.81□□□□□ -0.2
CNOT10-219ENST00000556853 IRF7Q92985 503 aa13.81□□□□□ -0.2
CNOT10-219ENST00000556853 PGBD4Q96DM1 585 aa13.81□□□□□ -0.2
CNOT10-219ENST00000556853 B3GALT6Q96L58 329 aa13.81□□□□□ -0.2
CNOT10-219ENST00000556853 ZNF334Q9HCZ1 680 aaPredicted RBP13.81□□□□□ -0.2
CNOT10-219ENST00000556853 TMEM9BQ9NQ34 198 aa13.81□□□□□ -0.2
CNOT10-219ENST00000556853 SCUBE2Q9NQ36 999 aa13.81□□□□□ -0.2
CNOT10-219ENST00000556853 HCFC1R1Q9NWW0 138 aa13.81□□□□□ -0.2
CNOT10-219ENST00000556853 GDE1Q9NZC3 331 aa13.81□□□□□ -0.2
CNOT10-219ENST00000556853 DNMT3BQ9UBC3 853 aaKnown RBP13.81□□□□□ -0.2
CNOT10-219ENST00000556853 POLIQ9UNA4 740 aa13.81□□□□□ -0.2
CNOT10-219ENST00000556853 CCDC163A0A0D9SF12 145 aa13.8□□□□□ -0.2
CNOT10-219ENST00000556853 PCNX2A6NKB5 2137 aa13.8□□□□□ -0.2
CNOT10-219ENST00000556853 TK2O00142 265 aa13.8□□□□□ -0.2
CNOT10-219ENST00000556853 XYLBO75191 536 aa13.8□□□□□ -0.2
CNOT10-219ENST00000556853 AKAP3O75969 853 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms