RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 MIOSQ9NXC5 875 aa16.48■□□□□ 0.23
CHD8-211ENST00000556833 TPCN1Q9ULQ1 816 aa16.48■□□□□ 0.23
CHD8-211ENST00000556833 SPTBN4Q9H254 2564 aa16.47■□□□□ 0.23
CHD8-211ENST00000556833 DOCK6Q96HP0 2047 aa16.47■□□□□ 0.23
CHD8-211ENST00000556833 ARL5CA6NH57 179 aa16.47■□□□□ 0.23
CHD8-211ENST00000556833 NARSO43776 548 aaKnown RBP16.47■□□□□ 0.23
CHD8-211ENST00000556833 ST18O60284 1047 aa16.47■□□□□ 0.23
CHD8-211ENST00000556833 TSPAN1O60635 241 aa16.47■□□□□ 0.23
CHD8-211ENST00000556833 DKC1O60832 514 aaKnown RBP eCLIP16.47■□□□□ 0.23
CHD8-211ENST00000556833 RFPL2O75678 378 aa16.47■□□□□ 0.23
CHD8-211ENST00000556833 CDKL5O76039 1030 aa16.47■□□□□ 0.23
CHD8-211ENST00000556833 NCLP19338 710 aaKnown RBP16.47■□□□□ 0.23
CHD8-211ENST00000556833 ASTLQ6HA08 431 aaPredicted RBP16.47■□□□□ 0.23
CHD8-211ENST00000556833 PPP4R3AQ6IN85 833 aa16.47■□□□□ 0.23
CHD8-211ENST00000556833 MAEAQ7L5Y9 396 aa16.47■□□□□ 0.23
CHD8-211ENST00000556833 ASCL5Q7RTU5 278 aa16.47■□□□□ 0.23
CHD8-211ENST00000556833 PPFIBP1Q86W92 1011 aa16.47■□□□□ 0.23
CHD8-211ENST00000556833 NECAB1Q8N987 351 aa16.47■□□□□ 0.23
CHD8-211ENST00000556833 RSAD2Q8WXG1 361 aa16.47■□□□□ 0.23
CHD8-211ENST00000556833 ACSF2Q96CM8 615 aaPredicted RBP16.47■□□□□ 0.23
CHD8-211ENST00000556833 NXF3Q9H4D5 531 aaKnown RBP16.47■□□□□ 0.23
CHD8-211ENST00000556833 KLK14Q9P0G3 267 aa16.47■□□□□ 0.23
CHD8-211ENST00000556833 ORC3Q9UBD5 711 aaPredicted RBP16.47■□□□□ 0.23
CHD8-211ENST00000556833 FBXL21Q9UKT6 434 aa16.47■□□□□ 0.23
CHD8-211ENST00000556833 DMDP11532 3685 aa16.47■□□□□ 0.23
CHD8-211ENST00000556833 CNTNAP2Q9UHC6 1331 aa16.46■□□□□ 0.23
CHD8-211ENST00000556833 PTPRZ1P23471 2315 aaPredicted RBP16.46■□□□□ 0.23
CHD8-211ENST00000556833 DOCK8Q8NF50 2099 aa16.46■□□□□ 0.23
CHD8-211ENST00000556833 WNT7AO00755 349 aa16.46■□□□□ 0.23
CHD8-211ENST00000556833 TEX28O15482 410 aa16.46■□□□□ 0.23
CHD8-211ENST00000556833 B4GALT5O43286 388 aa16.46■□□□□ 0.23
CHD8-211ENST00000556833 PI15O43692 258 aa16.46■□□□□ 0.23
CHD8-211ENST00000556833 N4BP1O75113 896 aaKnown RBP16.46■□□□□ 0.23
CHD8-211ENST00000556833 CTDNEP1O95476 244 aa16.46■□□□□ 0.23
CHD8-211ENST00000556833 SOD2P04179 222 aa16.46■□□□□ 0.23
CHD8-211ENST00000556833 GCFC2P16383 781 aaKnown RBP16.46■□□□□ 0.23
CHD8-211ENST00000556833 XBP1P17861 261 aa16.46■□□□□ 0.23
CHD8-211ENST00000556833 AKAP5P24588 427 aa16.46■□□□□ 0.23
CHD8-211ENST00000556833 GBP2P32456 591 aaPredicted RBP16.46■□□□□ 0.23
CHD8-211ENST00000556833 SPIRE1Q08AE8 756 aa16.46■□□□□ 0.23
CHD8-211ENST00000556833 CWF19L1Q69YN2 538 aaKnown RBP16.46■□□□□ 0.23
CHD8-211ENST00000556833 OTUD6AQ7L8S5 288 aa16.46■□□□□ 0.23
CHD8-211ENST00000556833 PALB2Q86YC2 1186 aa16.46■□□□□ 0.23
CHD8-211ENST00000556833 C4orf19Q8IY42 314 aa16.46■□□□□ 0.23
CHD8-211ENST00000556833 COLGALT2Q8IYK4 626 aa16.46■□□□□ 0.23
CHD8-211ENST00000556833 PLCD3Q8N3E9 789 aa16.46■□□□□ 0.23
CHD8-211ENST00000556833 TCP11Q8WWU5 503 aa16.46■□□□□ 0.23
CHD8-211ENST00000556833 CCDC43Q96MW1 224 aaKnown RBP16.46■□□□□ 0.23
CHD8-211ENST00000556833 EIF2AK1Q9BQI3 630 aaKnown RBP16.46■□□□□ 0.23
CHD8-211ENST00000556833 TMEM175Q9BSA9 504 aa16.46■□□□□ 0.23
CHD8-211ENST00000556833 HERC2P3Q9BVR0 1158 aa16.46■□□□□ 0.23
CHD8-211ENST00000556833 TM6SF1Q9BZW5 370 aa16.46■□□□□ 0.23
CHD8-211ENST00000556833 ZSWIM4Q9H7M6 989 aa16.46■□□□□ 0.23
CHD8-211ENST00000556833 MTCL1Q9Y4B5 1905 aaKnown RBP16.46■□□□□ 0.23
CHD8-211ENST00000556833 RIF1Q5UIP0 2472 aaKnown RBP16.45■□□□□ 0.22
CHD8-211ENST00000556833 CCDC195A0A1B0GUA6 201 aa16.45■□□□□ 0.22
CHD8-211ENST00000556833 INPPL1O15357 1258 aa16.45■□□□□ 0.22
CHD8-211ENST00000556833 LILRB3O75022 631 aa16.45■□□□□ 0.22
CHD8-211ENST00000556833 BAG4O95429 457 aaKnown RBP16.45■□□□□ 0.22
CHD8-211ENST00000556833 LARGE1O95461 756 aa16.45■□□□□ 0.22
CHD8-211ENST00000556833 NPTXRO95502 500 aa16.45■□□□□ 0.22
CHD8-211ENST00000556833 CFHP08603 1231 aa16.45■□□□□ 0.22
CHD8-211ENST00000556833 RPL17P18621 184 aaKnown RBP16.45■□□□□ 0.22
CHD8-211ENST00000556833 KRT2P35908 639 aa16.45■□□□□ 0.22
CHD8-211ENST00000556833 GLUD2P49448 558 aa16.45■□□□□ 0.22
CHD8-211ENST00000556833 CAPSQ13938 189 aa16.45■□□□□ 0.22
CHD8-211ENST00000556833 NOTUMQ6P988 496 aa16.45■□□□□ 0.22
CHD8-211ENST00000556833 OTOP3Q7RTS5 596 aa16.45■□□□□ 0.22
CHD8-211ENST00000556833 FRMD5Q7Z6J6 570 aa16.45■□□□□ 0.22
CHD8-211ENST00000556833 SIX5Q8N196 739 aa16.45■□□□□ 0.22
CHD8-211ENST00000556833 PIGOQ8TEQ8 1089 aa16.45■□□□□ 0.22
CHD8-211ENST00000556833 HASPINQ8TF76 798 aa16.45■□□□□ 0.22
CHD8-211ENST00000556833 RSPH1Q8WYR4 309 aa16.45■□□□□ 0.22
CHD8-211ENST00000556833 RPS6KC1Q96S38 1066 aa16.45■□□□□ 0.22
CHD8-211ENST00000556833 TRIM6Q9C030 488 aaPredicted RBP16.45■□□□□ 0.22
CHD8-211ENST00000556833 KCNK12Q9HB15 430 aa16.45■□□□□ 0.22
CHD8-211ENST00000556833 KANSL3Q9P2N6 904 aa16.45■□□□□ 0.22
CHD8-211ENST00000556833 USTQ9Y2C2 406 aa16.45■□□□□ 0.22
CHD8-211ENST00000556833 STK36Q9NRP7 1315 aa16.45■□□□□ 0.22
CHD8-211ENST00000556833 STK25O00506 426 aa16.44■□□□□ 0.22
CHD8-211ENST00000556833 USO1O60763 962 aaKnown RBP16.44■□□□□ 0.22
CHD8-211ENST00000556833 PFKFB2O60825 505 aa16.44■□□□□ 0.22
CHD8-211ENST00000556833 GLUD1P00367 558 aa16.44■□□□□ 0.22
CHD8-211ENST00000556833 ADH1AP07327 375 aa16.44■□□□□ 0.22
CHD8-211ENST00000556833 ARF4P18085 180 aaPredicted RBP16.44■□□□□ 0.22
CHD8-211ENST00000556833 PTENP60484 403 aa16.44■□□□□ 0.22
CHD8-211ENST00000556833 MBTD1Q05BQ5 628 aa16.44■□□□□ 0.22
CHD8-211ENST00000556833 TDGQ13569 410 aa16.44■□□□□ 0.22
CHD8-211ENST00000556833 CSRNP2Q9H175 543 aa16.44■□□□□ 0.22
CHD8-211ENST00000556833 POLR3FQ9H1D9 316 aaPredicted RBP16.44■□□□□ 0.22
CHD8-211ENST00000556833 GPRC5CQ9NQ84 441 aa16.44■□□□□ 0.22
CHD8-211ENST00000556833 PARP2Q9UGN5 583 aa16.44■□□□□ 0.22
CHD8-211ENST00000556833 FAM186AA6NE01 2351 aa16.43■□□□□ 0.22
CHD8-211ENST00000556833 WDR87Q6ZQQ6 2873 aa16.43■□□□□ 0.22
CHD8-211ENST00000556833 CARNS1A5YM72 827 aa16.43■□□□□ 0.22
CHD8-211ENST00000556833 TBX3O15119 743 aa16.43■□□□□ 0.22
CHD8-211ENST00000556833 SLITRK3O94933 977 aa16.43■□□□□ 0.22
CHD8-211ENST00000556833 LIG1P18858 919 aa16.43■□□□□ 0.22
CHD8-211ENST00000556833 ATP2B1P20020 1258 aa16.43■□□□□ 0.22
CHD8-211ENST00000556833 GLRA2P23416 452 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms