RNA–Protein interactions for RNA: ENST00000556742.1

IFT43-212, Transcript of intraflagellar transport 43, humanhuman

TSL 2 BASIC

Gene IFT43, Length 848 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-212ENST00000556742 BLOC1S4Q9NUP1 217 aa11.84□□□□□ -0.51
IFT43-212ENST00000556742 ARHGAP28Q9P2N2 729 aa11.84□□□□□ -0.51
IFT43-212ENST00000556742 KANSL3Q9P2N6 904 aa11.84□□□□□ -0.51
IFT43-212ENST00000556742 STK17AQ9UEE5 414 aa11.84□□□□□ -0.51
IFT43-212ENST00000556742 CCDC39Q9UFE4 941 aa11.84□□□□□ -0.51
IFT43-212ENST00000556742 ODF2LQ9ULJ1 636 aa11.84□□□□□ -0.51
IFT43-212ENST00000556742 IPPQ9Y573 584 aa11.84□□□□□ -0.51
IFT43-212ENST00000556742 TCF20Q9UGU0 1960 aaKnown RBP11.84□□□□□ -0.51
IFT43-212ENST00000556742 NCK2O43639 380 aa11.83□□□□□ -0.52
IFT43-212ENST00000556742 PPP6R2O75170 966 aa11.83□□□□□ -0.52
IFT43-212ENST00000556742 SSBP05455 408 aaKnown RBP eCLIP11.83□□□□□ -0.52
IFT43-212ENST00000556742 PLS3P13797 630 aa11.83□□□□□ -0.52
IFT43-212ENST00000556742 DDIT3P35638 169 aa11.83□□□□□ -0.52
IFT43-212ENST00000556742 ALDH7A1P49419 539 aaKnown RBP11.83□□□□□ -0.52
IFT43-212ENST00000556742 SMTNP53814 917 aa11.83□□□□□ -0.52
IFT43-212ENST00000556742 PEX3P56589 373 aa11.83□□□□□ -0.52
IFT43-212ENST00000556742 COL19A1Q14993 1142 aa11.83□□□□□ -0.52
IFT43-212ENST00000556742 STK38Q15208 465 aa11.83□□□□□ -0.52
IFT43-212ENST00000556742 AAK1Q2M2I8 961 aa11.83□□□□□ -0.52
IFT43-212ENST00000556742 ARSHQ5FYA8 562 aa11.83□□□□□ -0.52
IFT43-212ENST00000556742 PDE12Q6L8Q7 609 aaKnown RBP11.83□□□□□ -0.52
IFT43-212ENST00000556742 THNSL1Q8IYQ7 743 aa11.83□□□□□ -0.52
IFT43-212ENST00000556742 RASSF8Q8NHQ8 419 aa11.83□□□□□ -0.52
IFT43-212ENST00000556742 POF1BQ8WVV4 589 aa11.83□□□□□ -0.52
IFT43-212ENST00000556742 LARP4BQ92615 738 aaKnown RBP11.83□□□□□ -0.52
IFT43-212ENST00000556742 RAD54LQ92698 747 aa11.83□□□□□ -0.52
IFT43-212ENST00000556742 SYMPKQ92797 1274 aaKnown RBP11.83□□□□□ -0.52
IFT43-212ENST00000556742 HLA-CQ95604 372 aa11.83□□□□□ -0.52
IFT43-212ENST00000556742 PPP2R3CQ969Q6 453 aa11.83□□□□□ -0.52
IFT43-212ENST00000556742 EPSTI1Q96J88 318 aa11.83□□□□□ -0.52
IFT43-212ENST00000556742 PLIN2Q99541 437 aa11.83□□□□□ -0.52
IFT43-212ENST00000556742 ADPGKQ9BRR6 497 aa11.83□□□□□ -0.52
IFT43-212ENST00000556742 PDZD7Q9H5P4 517 aa11.83□□□□□ -0.52
IFT43-212ENST00000556742 KMT5AQ9NQR1 393 aa11.83□□□□□ -0.52
IFT43-212ENST00000556742 TBC1D13Q9NVG8 400 aa11.83□□□□□ -0.52
IFT43-212ENST00000556742 LARSQ9P2J5 1176 aaKnown RBP11.83□□□□□ -0.52
IFT43-212ENST00000556742 HCSTQ9UBK5 93 aa11.83□□□□□ -0.52
IFT43-212ENST00000556742 GIT1Q9Y2X7 761 aa11.83□□□□□ -0.52
IFT43-212ENST00000556742 ANK1P16157 1881 aa11.83□□□□□ -0.52
IFT43-212ENST00000556742 MTCL1Q9Y4B5 1905 aaKnown RBP11.82□□□□□ -0.52
IFT43-212ENST00000556742 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.82□□□□□ -0.52
IFT43-212ENST00000556742 CCDC169A6NNP5 214 aa11.82□□□□□ -0.52
IFT43-212ENST00000556742 H0YCG3 227 aa11.82□□□□□ -0.52
IFT43-212ENST00000556742 SPTLC2O15270 562 aa11.82□□□□□ -0.52
IFT43-212ENST00000556742 NPTXRO95502 500 aa11.82□□□□□ -0.52
IFT43-212ENST00000556742 DNAJB1P25685 340 aa11.82□□□□□ -0.52
IFT43-212ENST00000556742 ZNF131P52739 623 aa11.82□□□□□ -0.52
IFT43-212ENST00000556742 BCAR1P56945 870 aa11.82□□□□□ -0.52
IFT43-212ENST00000556742 KRT17Q04695 432 aa11.82□□□□□ -0.52
IFT43-212ENST00000556742 RNASELQ05823 741 aaKnown RBP11.82□□□□□ -0.52
IFT43-212ENST00000556742 SKIV2LQ15477 1246 aaKnown RBP11.82□□□□□ -0.52
IFT43-212ENST00000556742 DCAF4L1Q3SXM0 396 aa11.82□□□□□ -0.52
IFT43-212ENST00000556742 LONRF3Q496Y0 759 aa11.82□□□□□ -0.52
IFT43-212ENST00000556742 USP49Q70CQ1 688 aa11.82□□□□□ -0.52
IFT43-212ENST00000556742 APBB1IPQ7Z5R6 666 aaPredicted RBP11.82□□□□□ -0.52
IFT43-212ENST00000556742 SLC39A11Q8N1S5 342 aa11.82□□□□□ -0.52
IFT43-212ENST00000556742 LRRC15Q8TF66 581 aa11.82□□□□□ -0.52
IFT43-212ENST00000556742 MRPS27Q92552 414 aaKnown RBP11.82□□□□□ -0.52
IFT43-212ENST00000556742 CLIC6Q96NY7 704 aa11.82□□□□□ -0.52
IFT43-212ENST00000556742 KIFC3Q9BVG8 833 aa11.82□□□□□ -0.52
IFT43-212ENST00000556742 NXF3Q9H4D5 531 aaKnown RBP11.82□□□□□ -0.52
IFT43-212ENST00000556742 NRDE2Q9H7Z3 1164 aa11.82□□□□□ -0.52
IFT43-212ENST00000556742 POLD4Q9HCU8 107 aa11.82□□□□□ -0.52
IFT43-212ENST00000556742 PRDM6Q9NQX0 595 aa11.82□□□□□ -0.52
IFT43-212ENST00000556742 TLR9Q9NR96 1032 aa11.82□□□□□ -0.52
IFT43-212ENST00000556742 SPG21Q9NZD8 308 aa11.82□□□□□ -0.52
IFT43-212ENST00000556742 STK39Q9UEW8 545 aa11.82□□□□□ -0.52
IFT43-212ENST00000556742 PUF60Q9UHX1 559 aaKnown RBP11.82□□□□□ -0.52
IFT43-212ENST00000556742 CFAP45Q9UL16 551 aa11.82□□□□□ -0.52
IFT43-212ENST00000556742 FSD2A1L4K1 749 aa11.81□□□□□ -0.52
IFT43-212ENST00000556742 ARL5CA6NH57 179 aa11.81□□□□□ -0.52
IFT43-212ENST00000556742 TTLL13PA6NNM8 815 aa11.81□□□□□ -0.52
IFT43-212ENST00000556742 ZC3H11AO75152 810 aaKnown RBP eCLIP11.81□□□□□ -0.52
IFT43-212ENST00000556742 EDN1P05305 212 aa11.81□□□□□ -0.52
IFT43-212ENST00000556742 ABCD1P33897 745 aa11.81□□□□□ -0.52
IFT43-212ENST00000556742 NCKAP1LP55160 1127 aa11.81□□□□□ -0.52
IFT43-212ENST00000556742 MRPS5P82675 430 aaKnown RBP11.81□□□□□ -0.52
IFT43-212ENST00000556742 RAD51AP2Q09MP3 1159 aa11.81□□□□□ -0.52
IFT43-212ENST00000556742 PKP1Q13835 747 aa11.81□□□□□ -0.52
IFT43-212ENST00000556742 BECN1Q14457 450 aa11.81□□□□□ -0.52
IFT43-212ENST00000556742 MCM6Q14566 821 aa11.81□□□□□ -0.52
IFT43-212ENST00000556742 TCEAL5Q5H9L2 206 aa11.81□□□□□ -0.52
IFT43-212ENST00000556742 TJAP1Q5JTD0 557 aa11.81□□□□□ -0.52
IFT43-212ENST00000556742 SPECC1Q5M775 1068 aa11.81□□□□□ -0.52
IFT43-212ENST00000556742 ATF7IP2Q5U623 682 aa11.81□□□□□ -0.52
IFT43-212ENST00000556742 RRAGBQ5VZM2 374 aa11.81□□□□□ -0.52
IFT43-212ENST00000556742 CCDC73Q6ZRK6 1079 aa11.81□□□□□ -0.52
IFT43-212ENST00000556742 GPBP1Q86WP2 473 aa11.81□□□□□ -0.52
IFT43-212ENST00000556742 CDR2LQ86X02 465 aaPredicted RBP11.81□□□□□ -0.52
IFT43-212ENST00000556742 SPRYD3Q8NCJ5 442 aa11.81□□□□□ -0.52
IFT43-212ENST00000556742 TMEM161BQ8NDZ6 487 aa11.81□□□□□ -0.52
IFT43-212ENST00000556742 KCNG4Q8TDN1 519 aa11.81□□□□□ -0.52
IFT43-212ENST00000556742 PABPC5Q96DU9 382 aaKnown RBP11.81□□□□□ -0.52
IFT43-212ENST00000556742 ASB2Q96Q27 587 aa11.81□□□□□ -0.52
IFT43-212ENST00000556742 REEP2Q9BRK0 252 aa11.81□□□□□ -0.52
IFT43-212ENST00000556742 TMEM175Q9BSA9 504 aa11.81□□□□□ -0.52
IFT43-212ENST00000556742 MRPL4Q9BYD3 311 aaKnown RBP11.81□□□□□ -0.52
IFT43-212ENST00000556742 TFIP11Q9UBB9 837 aaKnown RBP11.81□□□□□ -0.52
IFT43-212ENST00000556742 TNFSF13BQ9Y275 285 aa11.81□□□□□ -0.52
IFT43-212ENST00000556742 INPP5FQ9Y2H2 1132 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms