RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 HNRNPDLO14979 420 aaKnown RBP12.34□□□□□ -0.43
FOXN3-212ENST00000556541 MAPK13O15264 365 aa12.34□□□□□ -0.43
FOXN3-212ENST00000556541 CALUO43852 315 aaPredicted RBP12.34□□□□□ -0.43
FOXN3-212ENST00000556541 EFCAB14O75071 495 aa12.34□□□□□ -0.43
FOXN3-212ENST00000556541 CD44P16070 742 aaKnown RBP12.34□□□□□ -0.43
FOXN3-212ENST00000556541 ARF4P18085 180 aaPredicted RBP12.34□□□□□ -0.43
FOXN3-212ENST00000556541 RPL13P26373 211 aaKnown RBP12.34□□□□□ -0.43
FOXN3-212ENST00000556541 HOXA11P31270 313 aaPredicted RBP12.34□□□□□ -0.43
FOXN3-212ENST00000556541 HOXD11P31277 338 aaPredicted RBP12.34□□□□□ -0.43
FOXN3-212ENST00000556541 RAB27AP51159 221 aa12.34□□□□□ -0.43
FOXN3-212ENST00000556541 MCL1Q07820 350 aa12.34□□□□□ -0.43
FOXN3-212ENST00000556541 TMEM62Q0P6H9 643 aa12.34□□□□□ -0.43
FOXN3-212ENST00000556541 PAK2Q13177 524 aa12.34□□□□□ -0.43
FOXN3-212ENST00000556541 DSC3Q14574 896 aa12.34□□□□□ -0.43
FOXN3-212ENST00000556541 GPNMBQ14956 572 aa12.34□□□□□ -0.43
FOXN3-212ENST00000556541 DCAF4L1Q3SXM0 396 aa12.34□□□□□ -0.43
FOXN3-212ENST00000556541 NOTUMQ6P988 496 aa12.34□□□□□ -0.43
FOXN3-212ENST00000556541 CATSPER4Q7RTX7 472 aa12.34□□□□□ -0.43
FOXN3-212ENST00000556541 TMEM199Q8N511 208 aa12.34□□□□□ -0.43
FOXN3-212ENST00000556541 ENOX1Q8TC92 643 aaKnown RBP12.34□□□□□ -0.43
FOXN3-212ENST00000556541 TRIM43Q96BQ3 446 aaPredicted RBP12.34□□□□□ -0.43
FOXN3-212ENST00000556541 FBXL18Q96ME1 805 aa12.34□□□□□ -0.43
FOXN3-212ENST00000556541 TSG101Q99816 390 aa12.34□□□□□ -0.43
FOXN3-212ENST00000556541 KIAA1586Q9HCI6 787 aa12.34□□□□□ -0.43
FOXN3-212ENST00000556541 DMAC2Q9NW81 257 aa12.34□□□□□ -0.43
FOXN3-212ENST00000556541 PRKAG2Q9UGJ0 569 aa12.34□□□□□ -0.43
FOXN3-212ENST00000556541 PADI3Q9ULW8 664 aa12.34□□□□□ -0.43
FOXN3-212ENST00000556541 ST3GAL5Q9UNP4 418 aa12.34□□□□□ -0.43
FOXN3-212ENST00000556541 A0A0B4J269 797 aa12.33□□□□□ -0.44
FOXN3-212ENST00000556541 NBNO60934 754 aa12.33□□□□□ -0.44
FOXN3-212ENST00000556541 ZNF623O75123 536 aa12.33□□□□□ -0.44
FOXN3-212ENST00000556541 LDHAP00338 332 aaKnown RBP12.33□□□□□ -0.44
FOXN3-212ENST00000556541 CTSHP09668 335 aa12.33□□□□□ -0.44
FOXN3-212ENST00000556541 MCF2P10911 925 aa12.33□□□□□ -0.44
FOXN3-212ENST00000556541 SKIP12755 728 aa12.33□□□□□ -0.44
FOXN3-212ENST00000556541 RAG1P15918 1043 aa12.33□□□□□ -0.44
FOXN3-212ENST00000556541 LIG4P49917 911 aa12.33□□□□□ -0.44
FOXN3-212ENST00000556541 FKBP3Q00688 224 aaKnown RBP12.33□□□□□ -0.44
FOXN3-212ENST00000556541 KCNA1Q09470 495 aa12.33□□□□□ -0.44
FOXN3-212ENST00000556541 ATF7IP2Q5U623 682 aa12.33□□□□□ -0.44
FOXN3-212ENST00000556541 TTI2Q6NXR4 508 aa12.33□□□□□ -0.44
FOXN3-212ENST00000556541 SLC39A4Q6P5W5 647 aa12.33□□□□□ -0.44
FOXN3-212ENST00000556541 SLC27A1Q6PCB7 646 aa12.33□□□□□ -0.44
FOXN3-212ENST00000556541 MPZL3Q6UWV2 235 aa12.33□□□□□ -0.44
FOXN3-212ENST00000556541 SMYD4Q8IYR2 804 aaPredicted RBP12.33□□□□□ -0.44
FOXN3-212ENST00000556541 RPUSD2Q8IZ73 545 aaKnown RBP12.33□□□□□ -0.44
FOXN3-212ENST00000556541 SYCP3Q8IZU3 236 aa12.33□□□□□ -0.44
FOXN3-212ENST00000556541 NOC3LQ8WTT2 800 aaKnown RBP12.33□□□□□ -0.44
FOXN3-212ENST00000556541 SEPT8Q92599 483 aa12.33□□□□□ -0.44
FOXN3-212ENST00000556541 CEP63Q96MT8 703 aa12.33□□□□□ -0.44
FOXN3-212ENST00000556541 ADPGKQ9BRR6 497 aa12.33□□□□□ -0.44
FOXN3-212ENST00000556541 MKNK1Q9BUB5 465 aa12.33□□□□□ -0.44
FOXN3-212ENST00000556541 TARS2Q9BW92 718 aaKnown RBP12.33□□□□□ -0.44
FOXN3-212ENST00000556541 IFIH1Q9BYX4 1025 aaKnown RBP12.33□□□□□ -0.44
FOXN3-212ENST00000556541 SEMA6BQ9H3T3 888 aa12.33□□□□□ -0.44
FOXN3-212ENST00000556541 AGO3Q9H9G7 860 aaKnown RBP12.33□□□□□ -0.44
FOXN3-212ENST00000556541 AGPAT3Q9NRZ7 376 aa12.33□□□□□ -0.44
FOXN3-212ENST00000556541 C1orf112Q9NSG2 853 aa12.33□□□□□ -0.44
FOXN3-212ENST00000556541 PDCD11Q14690 1871 aaKnown RBP12.33□□□□□ -0.44
FOXN3-212ENST00000556541 TTC3P53804 2025 aa12.33□□□□□ -0.44
FOXN3-212ENST00000556541 ANK1P16157 1881 aa12.32□□□□□ -0.44
FOXN3-212ENST00000556541 CLDN3O15551 220 aa12.32□□□□□ -0.44
FOXN3-212ENST00000556541 EVI5O60447 810 aa12.32□□□□□ -0.44
FOXN3-212ENST00000556541 BAIAP3O94812 1187 aa12.32□□□□□ -0.44
FOXN3-212ENST00000556541 FGFR1OPO95684 399 aaKnown RBP12.32□□□□□ -0.44
FOXN3-212ENST00000556541 EDN1P05305 212 aa12.32□□□□□ -0.44
FOXN3-212ENST00000556541 GHRP10912 638 aa12.32□□□□□ -0.44
FOXN3-212ENST00000556541 PPIGQ13427 754 aaKnown RBP eCLIP12.32□□□□□ -0.44
FOXN3-212ENST00000556541 NOLC1Q14978 699 aaKnown RBP eCLIP12.32□□□□□ -0.44
FOXN3-212ENST00000556541 CNKSR3Q6P9H4 555 aa12.32□□□□□ -0.44
FOXN3-212ENST00000556541 NELFBQ8WX92 580 aa12.32□□□□□ -0.44
FOXN3-212ENST00000556541 BICD1Q96G01 975 aa12.32□□□□□ -0.44
FOXN3-212ENST00000556541 TSPAN18Q96SJ8 248 aa12.32□□□□□ -0.44
FOXN3-212ENST00000556541 TSPYL2Q9H2G4 693 aaPredicted RBP12.32□□□□□ -0.44
FOXN3-212ENST00000556541 PDZD7Q9H5P4 517 aa12.32□□□□□ -0.44
FOXN3-212ENST00000556541 GINS2Q9Y248 185 aa12.32□□□□□ -0.44
FOXN3-212ENST00000556541 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.32□□□□□ -0.44
FOXN3-212ENST00000556541 NR2E3Q9Y5X4 410 aa12.32□□□□□ -0.44
FOXN3-212ENST00000556541 UMODL1Q5DID0 1318 aa12.32□□□□□ -0.44
FOXN3-212ENST00000556541 ABHD14A-ACY1A0A1B0GW23 586 aa12.31□□□□□ -0.44
FOXN3-212ENST00000556541 OGTO15294 1046 aa12.31□□□□□ -0.44
FOXN3-212ENST00000556541 SLC16A3O15427 465 aaKnown RBP12.31□□□□□ -0.44
FOXN3-212ENST00000556541 B4GALT5O43286 388 aa12.31□□□□□ -0.44
FOXN3-212ENST00000556541 FAM189A1O60320 539 aa12.31□□□□□ -0.44
FOXN3-212ENST00000556541 GNA14O95837 355 aa12.31□□□□□ -0.44
FOXN3-212ENST00000556541 ADRB2P07550 413 aa12.31□□□□□ -0.44
FOXN3-212ENST00000556541 ZSCAN20P17040 1043 aaPredicted RBP12.31□□□□□ -0.44
FOXN3-212ENST00000556541 ADSSP30520 456 aa12.31□□□□□ -0.44
FOXN3-212ENST00000556541 CD52P31358 61 aa12.31□□□□□ -0.44
FOXN3-212ENST00000556541 CYP2C18P33260 490 aa12.31□□□□□ -0.44
FOXN3-212ENST00000556541 MARSP56192 900 aaKnown RBP12.31□□□□□ -0.44
FOXN3-212ENST00000556541 FAM189BP81408 668 aa12.31□□□□□ -0.44
FOXN3-212ENST00000556541 ANO6Q4KMQ2 910 aa12.31□□□□□ -0.44
FOXN3-212ENST00000556541 SPATA1Q5VX52 437 aa12.31□□□□□ -0.44
FOXN3-212ENST00000556541 ISM2Q6H9L7 571 aa12.31□□□□□ -0.44
FOXN3-212ENST00000556541 LRRC55Q6ZSA7 311 aa12.31□□□□□ -0.44
FOXN3-212ENST00000556541 MRPL10Q7Z7H8 261 aaKnown RBP12.31□□□□□ -0.44
FOXN3-212ENST00000556541 NELFCDQ8IXH7 590 aa12.31□□□□□ -0.44
FOXN3-212ENST00000556541 FAM200AQ8TCP9 573 aa12.31□□□□□ -0.44
FOXN3-212ENST00000556541 VWCEQ96DN2 955 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms