RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 MYH14Q7Z406 1995 aaKnown RBP5.04□□□□□ -1.6
ATXN3-241ENST00000556374 UBR2Q8IWV8 1755 aa5.04□□□□□ -1.6
ATXN3-241ENST00000556374 TCHHQ07283 1943 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 PCDH11XQ9BZA7 1347 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 PCDH11YQ9BZA8 1340 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 GOLGA8BA8MQT2 603 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 STXBP3O00186 592 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 GOLIM4O00461 696 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 NOP56O00567 594 aaKnown RBP5.03□□□□□ -1.6
ATXN3-241ENST00000556374 CPLX1O14810 134 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 JAK2O60674 1132 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 PFKFB2O60825 505 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 TAF5LO75529 589 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 IGKV5-2P06315 115 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 ZFYP08048 801 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-241ENST00000556374 TNNT1P13805 278 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 TACR1P25103 407 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 GJA9P57773 515 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 ST3GAL1Q11201 340 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 TRDNQ13061 729 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 CCDC158Q5M9N0 1113 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 NT5DC1Q5TFE4 455 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 MROH9Q5TGP6 573 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 ZSCAN25Q6NSZ9 544 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 SARM1Q6SZW1 724 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 CCDC186Q7Z3E2 898 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 ZNF589Q86UQ0 364 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-241ENST00000556374 GGNQ86UU5 652 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 CCAR1Q8IX12 1150 aaKnown RBP5.03□□□□□ -1.6
ATXN3-241ENST00000556374 TTLL6Q8N841 843 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 FSIP1Q8NA03 581 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 KCNG4Q8TDN1 519 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 DDX11Q96FC9 970 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 MRFAP1L1Q96HT8 127 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 C16orf45Q96MC5 204 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-241ENST00000556374 CCDC140Q96MF4 163 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.03□□□□□ -1.6
ATXN3-241ENST00000556374 AP5M1Q9H0R1 490 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 GPR108Q9NPR9 543 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 HOOK1Q9UJC3 728 aaKnown RBP5.03□□□□□ -1.6
ATXN3-241ENST00000556374 DBNLQ9UJU6 430 aaKnown RBP5.03□□□□□ -1.6
ATXN3-241ENST00000556374 PYCARDQ9ULZ3 195 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 SUGT1Q9Y2Z0 365 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 CARMIL3Q8ND23 1372 aa5.03□□□□□ -1.6
ATXN3-241ENST00000556374 BCORQ6W2J9 1755 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 MYH7P12883 1935 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 PRAMEF22A3QJZ6 481 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 K7ESM1 405 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 CIAO1O76071 339 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 SMC2O95347 1197 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 YEATS4O95619 227 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 CYP21A2P08686 494 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 CYP2C8P10632 490 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 CEBPZQ03701 1054 aaKnown RBP5.02□□□□□ -1.61
ATXN3-241ENST00000556374 SCRN1Q12765 414 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 SLC39A6Q13433 755 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 PTPN14Q15678 1187 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 ZXDCQ2QGD7 858 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-241ENST00000556374 RABL6Q3YEC7 729 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-241ENST00000556374 HABP4Q5JVS0 413 aaKnown RBP5.02□□□□□ -1.61
ATXN3-241ENST00000556374 KIAA1211LQ6NV74 962 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 VHLLQ6RSH7 139 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 LMBR1LQ6UX01 489 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 KIF6Q6ZMV9 814 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 SYNE3Q6ZMZ3 975 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 ETV3LQ6ZN32 361 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 CCDC81Q6ZN84 652 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 RBM43Q6ZSC3 357 aaKnown RBP5.02□□□□□ -1.61
ATXN3-241ENST00000556374 BRAPQ7Z569 592 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 PLA2G4DQ86XP0 818 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 C17orf53Q8N3J3 647 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-241ENST00000556374 KYQ8NBH2 561 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 ADCY4Q8NFM4 1077 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 SMARCC2Q8TAQ2 1214 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 KLHDC4Q8TBB5 520 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 PLEKHO2Q8TD55 490 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.02□□□□□ -1.61
ATXN3-241ENST00000556374 ZNF274Q96GC6 653 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-241ENST00000556374 CCDC34Q96HJ3 373 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 C8orf76Q96K31 380 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 SDF4Q9BRK5 362 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 BDH2Q9BUT1 245 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 KRTAP9-8Q9BYQ0 159 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 ADAM7Q9H2U9 754 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 RWDD3Q9Y3V2 267 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 ANKRD31Q8N7Z5 1873 aa5.02□□□□□ -1.61
ATXN3-241ENST00000556374 ANKRD36CQ5JPF3 1778 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 MAST3O60307 1309 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 WDR19Q8NEZ3 1342 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 DDX60Q8IY21 1712 aaKnown RBP5.01□□□□□ -1.61
ATXN3-241ENST00000556374 E7EWF7 191 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 RNF113AO15541 343 aaKnown RBP5.01□□□□□ -1.61
ATXN3-241ENST00000556374 PRICKLE3O43900 615 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-241ENST00000556374 PPP1R11O60927 126 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-241ENST00000556374 TUBB4AP04350 444 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 ITGB3P05106 788 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 SCG5P05408 212 aa5.01□□□□□ -1.61
ATXN3-241ENST00000556374 SFPQP23246 707 aaKnown RBP eCLIP5.01□□□□□ -1.61
ATXN3-241ENST00000556374 RPL13P26373 211 aaKnown RBP5.01□□□□□ -1.61
ATXN3-241ENST00000556374 HOXC12P31275 282 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms