RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 MSTO1Q9BUK6 570 aa10.07□□□□□ -0.8
ACTN1-218ENST00000556343 TARS2Q9BW92 718 aaKnown RBP10.07□□□□□ -0.8
ACTN1-218ENST00000556343 TRIM5Q9C035 493 aa10.07□□□□□ -0.8
ACTN1-218ENST00000556343 CCDC113Q9H0I3 377 aa10.07□□□□□ -0.8
ACTN1-218ENST00000556343 IFT122Q9HBG6 1241 aa10.07□□□□□ -0.8
ACTN1-218ENST00000556343 DMAC2Q9NW81 257 aa10.07□□□□□ -0.8
ACTN1-218ENST00000556343 ARMCX3Q9UH62 379 aaPredicted RBP10.07□□□□□ -0.8
ACTN1-218ENST00000556343 TNFSF13BQ9Y275 285 aa10.07□□□□□ -0.8
ACTN1-218ENST00000556343 CDY2AQ9Y6F7 541 aa10.07□□□□□ -0.8
ACTN1-218ENST00000556343 ADGRA3Q8IWK6 1321 aa10.07□□□□□ -0.8
ACTN1-218ENST00000556343 ZNF233A6NK53 670 aa10.06□□□□□ -0.8
ACTN1-218ENST00000556343 EXTL3O43909 919 aa10.06□□□□□ -0.8
ACTN1-218ENST00000556343 B4GALT4O60513 344 aa10.06□□□□□ -0.8
ACTN1-218ENST00000556343 ZSCAN20P17040 1043 aaPredicted RBP10.06□□□□□ -0.8
ACTN1-218ENST00000556343 UBASH3AP57075 661 aa10.06□□□□□ -0.8
ACTN1-218ENST00000556343 FANCCQ00597 558 aa10.06□□□□□ -0.8
ACTN1-218ENST00000556343 POU5F1Q01860 360 aaKnown RBP10.06□□□□□ -0.8
ACTN1-218ENST00000556343 CETN1Q12798 172 aa10.06□□□□□ -0.8
ACTN1-218ENST00000556343 HIC1Q14526 733 aa10.06□□□□□ -0.8
ACTN1-218ENST00000556343 SNX17Q15036 470 aa10.06□□□□□ -0.8
ACTN1-218ENST00000556343 SURF1Q15526 300 aa10.06□□□□□ -0.8
ACTN1-218ENST00000556343 DCAF4L1Q3SXM0 396 aa10.06□□□□□ -0.8
ACTN1-218ENST00000556343 TCP11X2Q5H9J9 407 aa10.06□□□□□ -0.8
ACTN1-218ENST00000556343 FKBP15Q5T1M5 1219 aa10.06□□□□□ -0.8
ACTN1-218ENST00000556343 CDKAL1Q5VV42 579 aa10.06□□□□□ -0.8
ACTN1-218ENST00000556343 NOTUMQ6P988 496 aa10.06□□□□□ -0.8
ACTN1-218ENST00000556343 MPZL3Q6UWV2 235 aa10.06□□□□□ -0.8
ACTN1-218ENST00000556343 INTS8Q75QN2 995 aaKnown RBP10.06□□□□□ -0.8
ACTN1-218ENST00000556343 ANKRD33Q7Z3H0 272 aa10.06□□□□□ -0.8
ACTN1-218ENST00000556343 ZC3H3Q8IXZ2 948 aaKnown RBP10.06□□□□□ -0.8
ACTN1-218ENST00000556343 FAM186BQ8IYM0 893 aa10.06□□□□□ -0.8
ACTN1-218ENST00000556343 HACE1Q8IYU2 909 aa10.06□□□□□ -0.8
ACTN1-218ENST00000556343 GPD1LQ8N335 351 aa10.06□□□□□ -0.8
ACTN1-218ENST00000556343 CNOT6LQ96LI5 555 aaKnown RBP10.06□□□□□ -0.8
ACTN1-218ENST00000556343 NOC4LQ9BVI4 516 aaKnown RBP10.06□□□□□ -0.8
ACTN1-218ENST00000556343 TRPV6Q9H1D0 765 aa10.06□□□□□ -0.8
ACTN1-218ENST00000556343 PCIF1Q9H4Z3 704 aa10.06□□□□□ -0.8
ACTN1-218ENST00000556343 CHST12Q9NRB3 414 aa10.06□□□□□ -0.8
ACTN1-218ENST00000556343 SAMSN1Q9NSI8 373 aaKnown RBP10.06□□□□□ -0.8
ACTN1-218ENST00000556343 HSPBP1Q9NZL4 362 aa10.06□□□□□ -0.8
ACTN1-218ENST00000556343 LIMA1Q9UHB6 759 aaKnown RBP10.06□□□□□ -0.8
ACTN1-218ENST00000556343 AGO2Q9UKV8 859 aaKnown RBP10.06□□□□□ -0.8
ACTN1-218ENST00000556343 STYXL1Q9Y6J8 313 aa10.06□□□□□ -0.8
ACTN1-218ENST00000556343 SCN10AQ9Y5Y9 1956 aa10.06□□□□□ -0.8
ACTN1-218ENST00000556343 CNTNAP2Q9UHC6 1331 aa10.06□□□□□ -0.8
ACTN1-218ENST00000556343 A0A1B0GUA9 196 aa10.05□□□□□ -0.8
ACTN1-218ENST00000556343 LRRC10BA6NIK2 292 aa10.05□□□□□ -0.8
ACTN1-218ENST00000556343 GOLGA6L6A8MZA4 724 aa10.05□□□□□ -0.8
ACTN1-218ENST00000556343 ANKRD63C9JTQ0 380 aa10.05□□□□□ -0.8
ACTN1-218ENST00000556343 PES1O00541 588 aaKnown RBP10.05□□□□□ -0.8
ACTN1-218ENST00000556343 OGTO15294 1046 aa10.05□□□□□ -0.8
ACTN1-218ENST00000556343 PQBP1O60828 265 aaKnown RBP10.05□□□□□ -0.8
ACTN1-218ENST00000556343 MCF2P10911 925 aa10.05□□□□□ -0.8
ACTN1-218ENST00000556343 COL6A1P12109 1028 aa10.05□□□□□ -0.8
ACTN1-218ENST00000556343 SKIP12755 728 aa10.05□□□□□ -0.8
ACTN1-218ENST00000556343 SELPP16109 830 aa10.05□□□□□ -0.8
ACTN1-218ENST00000556343 ZNF18P17022 549 aa10.05□□□□□ -0.8
ACTN1-218ENST00000556343 ATN1P54259 1190 aaPredicted RBP10.05□□□□□ -0.8
ACTN1-218ENST00000556343 ENPEPQ07075 957 aa10.05□□□□□ -0.8
ACTN1-218ENST00000556343 MCL1Q07820 350 aa10.05□□□□□ -0.8
ACTN1-218ENST00000556343 PAK2Q13177 524 aa10.05□□□□□ -0.8
ACTN1-218ENST00000556343 NOLC1Q14978 699 aaKnown RBP eCLIP10.05□□□□□ -0.8
ACTN1-218ENST00000556343 SARM1Q6SZW1 724 aa10.05□□□□□ -0.8
ACTN1-218ENST00000556343 LRRC55Q6ZSA7 311 aa10.05□□□□□ -0.8
ACTN1-218ENST00000556343 TAS1R3Q7RTX0 852 aa10.05□□□□□ -0.8
ACTN1-218ENST00000556343 ZBTB33Q86T24 672 aa10.05□□□□□ -0.8
ACTN1-218ENST00000556343 FAM126BQ8IXS8 530 aa10.05□□□□□ -0.8
ACTN1-218ENST00000556343 PAWRQ96IZ0 340 aaKnown RBP10.05□□□□□ -0.8
ACTN1-218ENST00000556343 TUBGCP2Q9BSJ2 902 aa10.05□□□□□ -0.8
ACTN1-218ENST00000556343 TRIM6Q9C030 488 aaPredicted RBP10.05□□□□□ -0.8
ACTN1-218ENST00000556343 ANKFY1Q9P2R3 1169 aa10.05□□□□□ -0.8
ACTN1-218ENST00000556343 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.05□□□□□ -0.8
ACTN1-218ENST00000556343 WDR81Q562E7 1941 aa10.05□□□□□ -0.8
ACTN1-218ENST00000556343 ZMYM2Q9UBW7 1377 aa10.04□□□□□ -0.8
ACTN1-218ENST00000556343 A0A0B4J269 797 aa10.04□□□□□ -0.8
ACTN1-218ENST00000556343 TULP1O00294 542 aaPredicted RBP10.04□□□□□ -0.8
ACTN1-218ENST00000556343 PITPNM1O00562 1244 aa10.04□□□□□ -0.8
ACTN1-218ENST00000556343 TSPAN1O60635 241 aa10.04□□□□□ -0.8
ACTN1-218ENST00000556343 N4BP1O75113 896 aaKnown RBP10.04□□□□□ -0.8
ACTN1-218ENST00000556343 CD4P01730 458 aa10.04□□□□□ -0.8
ACTN1-218ENST00000556343 CHRNA1P02708 482 aa10.04□□□□□ -0.8
ACTN1-218ENST00000556343 CLTAP09496 248 aa10.04□□□□□ -0.8
ACTN1-218ENST00000556343 CTSHP09668 335 aa10.04□□□□□ -0.8
ACTN1-218ENST00000556343 CKBP12277 381 aa10.04□□□□□ -0.8
ACTN1-218ENST00000556343 ARF4P18085 180 aaPredicted RBP10.04□□□□□ -0.8
ACTN1-218ENST00000556343 YARSP54577 528 aaKnown RBP10.04□□□□□ -0.8
ACTN1-218ENST00000556343 MARSP56192 900 aaKnown RBP10.04□□□□□ -0.8
ACTN1-218ENST00000556343 RBL2Q08999 1139 aa10.04□□□□□ -0.8
ACTN1-218ENST00000556343 MGAT3Q09327 533 aa10.04□□□□□ -0.8
ACTN1-218ENST00000556343 NFX1Q12986 1120 aaKnown RBP10.04□□□□□ -0.8
ACTN1-218ENST00000556343 SNRNP35Q16560 246 aaKnown RBP10.04□□□□□ -0.8
ACTN1-218ENST00000556343 MAN2A1Q16706 1144 aa10.04□□□□□ -0.8
ACTN1-218ENST00000556343 TRIM71Q2Q1W2 868 aaKnown RBP10.04□□□□□ -0.8
ACTN1-218ENST00000556343 ZNF568Q3ZCX4 644 aa10.04□□□□□ -0.8
ACTN1-218ENST00000556343 HSP90AA4PQ58FG1 418 aa10.04□□□□□ -0.8
ACTN1-218ENST00000556343 ZNF618Q5T7W0 954 aa10.04□□□□□ -0.8
ACTN1-218ENST00000556343 SLC27A1Q6PCB7 646 aa10.04□□□□□ -0.8
ACTN1-218ENST00000556343 CD302Q8IX05 232 aa10.04□□□□□ -0.8
ACTN1-218ENST00000556343 RDH13Q8NBN7 331 aa10.04□□□□□ -0.8
ACTN1-218ENST00000556343 MED15Q96RN5 788 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms