RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 TNPO2O14787 897 aaKnown RBP15.99■□□□□ 0.15
VPS33B-205ENST00000556096 HNRNPDLO14979 420 aaKnown RBP15.99■□□□□ 0.15
VPS33B-205ENST00000556096 URI1O94763 535 aaPredicted RBP15.99■□□□□ 0.15
VPS33B-205ENST00000556096 SLU7O95391 586 aaKnown RBP15.99■□□□□ 0.15
VPS33B-205ENST00000556096 SNAI1O95863 264 aaPredicted RBP15.99■□□□□ 0.15
VPS33B-205ENST00000556096 ADRB2P07550 413 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 RFX1P22670 979 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 ANXA13P27216 316 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 DLG4P78352 724 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 CYP27A1Q02318 531 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 PPP3CAQ08209 521 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 KLHL30Q0D2K2 578 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 IQCEQ6IPM2 695 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 FMNL3Q8IVF7 1028 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 GPD1LQ8N335 351 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 MSL3Q8N5Y2 521 aaKnown RBP15.99■□□□□ 0.15
VPS33B-205ENST00000556096 PLEKHO2Q8TD55 490 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 VTI1AQ96AJ9 217 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 BICD1Q96G01 975 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 MAML3Q96JK9 1138 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 STK33Q9BYT3 514 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 SLC5A4Q9NY91 659 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 GOLGA8IPA6NC78 632 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 LRRIQ4A6NIV6 560 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 GOLGA8JA6NMD2 632 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 ADCY3O60266 1144 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 LIG4P49917 911 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 FCGRTP55899 365 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 KIF5AQ12840 1032 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 TUBB2AQ13885 445 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 MXD4Q14582 209 aaPredicted RBP15.99■□□□□ 0.15
VPS33B-205ENST00000556096 KIF22Q14807 665 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 MORN1Q5T089 497 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 TMEM63BQ5T3F8 832 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 SLFN12LQ6IEE8 588 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 USP37Q86T82 979 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 TRIM50Q86XT4 487 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 CBWD2Q8IUF1 395 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 SLC35F6Q8N357 371 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 PPTC7Q8NI37 304 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 PARD3BQ8TEW8 1205 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 SAAL1Q96ER3 474 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 ERO1AQ96HE7 468 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 TUBB2BQ9BVA1 445 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 IFIH1Q9BYX4 1025 aaKnown RBP15.99■□□□□ 0.15
VPS33B-205ENST00000556096 LACRTQ9GZZ8 138 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 ERAP1Q9NZ08 941 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 APEX2Q9UBZ4 518 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 GUCA1BQ9UMX6 200 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 GABRQQ9UN88 632 aa15.99■□□□□ 0.15
VPS33B-205ENST00000556096 SIP14410 1827 aa15.98■□□□□ 0.15
VPS33B-205ENST00000556096 RCCD1A6NED2 376 aa15.98■□□□□ 0.15
VPS33B-205ENST00000556096 PJA2O43164 708 aa15.98■□□□□ 0.15
VPS33B-205ENST00000556096 MARK3P27448 753 aa15.98■□□□□ 0.15
VPS33B-205ENST00000556096 GTF2H1P32780 548 aa15.98■□□□□ 0.15
VPS33B-205ENST00000556096 STAT1P42224 750 aa15.98■□□□□ 0.15
VPS33B-205ENST00000556096 MAGEA1P43355 309 aa15.98■□□□□ 0.15
VPS33B-205ENST00000556096 EFNA5P52803 228 aa15.98■□□□□ 0.15
VPS33B-205ENST00000556096 CAPSQ13938 189 aa15.98■□□□□ 0.15
VPS33B-205ENST00000556096 EPC2Q52LR7 807 aa15.98■□□□□ 0.15
VPS33B-205ENST00000556096 NPLOC4Q8TAT6 608 aa15.98■□□□□ 0.15
VPS33B-205ENST00000556096 PRPF31Q8WWY3 499 aaKnown RBP15.98■□□□□ 0.15
VPS33B-205ENST00000556096 LUC7LQ9NQ29 371 aaKnown RBP15.98■□□□□ 0.15
VPS33B-205ENST00000556096 DNAJC12Q9UKB3 198 aa15.98■□□□□ 0.15
VPS33B-205ENST00000556096 AJAP1Q9UKB5 411 aaPredicted RBP15.98■□□□□ 0.15
VPS33B-205ENST00000556096 TRIM17Q9Y577 477 aa15.98■□□□□ 0.15
VPS33B-205ENST00000556096 CTAGE9A4FU28 777 aa15.97■□□□□ 0.15
VPS33B-205ENST00000556096 EXTL3O43909 919 aa15.97■□□□□ 0.15
VPS33B-205ENST00000556096 FERP16591 822 aa15.97■□□□□ 0.15
VPS33B-205ENST00000556096 PRKCZQ05513 592 aa15.97■□□□□ 0.15
VPS33B-205ENST00000556096 CYP24A1Q07973 514 aa15.97■□□□□ 0.15
VPS33B-205ENST00000556096 IRF5Q13568 498 aa15.97■□□□□ 0.15
VPS33B-205ENST00000556096 SLC18A3Q16572 532 aa15.97■□□□□ 0.15
VPS33B-205ENST00000556096 PSPC1Q8WXF1 523 aaKnown RBP15.97■□□□□ 0.15
VPS33B-205ENST00000556096 TINF2Q9BSI4 451 aa15.97■□□□□ 0.15
VPS33B-205ENST00000556096 TMEM117Q9H0C3 514 aa15.97■□□□□ 0.15
VPS33B-205ENST00000556096 ABHD16BQ9H3Z7 469 aa15.97■□□□□ 0.15
VPS33B-205ENST00000556096 TRIM10Q9UDY6 481 aa15.97■□□□□ 0.15
VPS33B-205ENST00000556096 ZNF233A6NK53 670 aa15.97■□□□□ 0.15
VPS33B-205ENST00000556096 GCLMP48507 274 aa15.97■□□□□ 0.15
VPS33B-205ENST00000556096 MXI1P50539 228 aa15.97■□□□□ 0.15
VPS33B-205ENST00000556096 GFPT1Q06210 699 aaPredicted RBP15.97■□□□□ 0.15
VPS33B-205ENST00000556096 MAP2K5Q13163 448 aa15.97■□□□□ 0.15
VPS33B-205ENST00000556096 MKRN4PQ13434 485 aaPredicted RBP15.97■□□□□ 0.15
VPS33B-205ENST00000556096 ZNF484Q5JVG2 852 aa15.97■□□□□ 0.15
VPS33B-205ENST00000556096 C10orf76Q5T2E6 689 aa15.97■□□□□ 0.15
VPS33B-205ENST00000556096 CDCA2Q69YH5 1023 aaPredicted RBP15.97■□□□□ 0.15
VPS33B-205ENST00000556096 IQSEC1Q6DN90 963 aa15.97■□□□□ 0.15
VPS33B-205ENST00000556096 GJB7Q6PEY0 223 aa15.97■□□□□ 0.15
VPS33B-205ENST00000556096 NAPGQ99747 312 aaPredicted RBP15.97■□□□□ 0.15
VPS33B-205ENST00000556096 TMEM8AQ9HCN3 771 aa15.97■□□□□ 0.15
VPS33B-205ENST00000556096 ZNF215Q9UL58 517 aaPredicted RBP15.97■□□□□ 0.15
VPS33B-205ENST00000556096 TRPC6Q9Y210 931 aa15.97■□□□□ 0.15
VPS33B-205ENST00000556096 COQ4Q9Y3A0 265 aa15.97■□□□□ 0.15
VPS33B-205ENST00000556096 MRFAP1Q9Y605 127 aa15.97■□□□□ 0.15
VPS33B-205ENST00000556096 LRRIQ3A6PVS8 624 aaPredicted RBP15.96■□□□□ 0.15
VPS33B-205ENST00000556096 F8VZ95 297 aa15.96■□□□□ 0.15
VPS33B-205ENST00000556096 PPFIA4O75335 1185 aa15.96■□□□□ 0.15
VPS33B-205ENST00000556096 LDHAP00338 332 aaKnown RBP15.96■□□□□ 0.15
VPS33B-205ENST00000556096 LGALS2P05162 132 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms