RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 DLK2Q6UY11 383 aa9.08□□□□□ -0.96
ATXN3-235ENST00000556082 ANKRD35Q8N283 1001 aa9.08□□□□□ -0.96
ATXN3-235ENST00000556082 FAM133AQ8N9E0 248 aa9.08□□□□□ -0.96
ATXN3-235ENST00000556082 GAS2L1Q99501 681 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-235ENST00000556082 DESI2Q9BSY9 194 aa9.08□□□□□ -0.96
ATXN3-235ENST00000556082 ASCC2Q9H1I8 757 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-235ENST00000556082 HAUS4Q9H6D7 363 aa9.08□□□□□ -0.96
ATXN3-235ENST00000556082 MMRN2Q9H8L6 949 aa9.08□□□□□ -0.96
ATXN3-235ENST00000556082 PDLIM7Q9NR12 457 aa9.08□□□□□ -0.96
ATXN3-235ENST00000556082 AGPAT3Q9NRZ7 376 aa9.08□□□□□ -0.96
ATXN3-235ENST00000556082 SLC9A2Q9UBY0 812 aa9.08□□□□□ -0.96
ATXN3-235ENST00000556082 DNAI1Q9UI46 699 aa9.08□□□□□ -0.96
ATXN3-235ENST00000556082 SLC45A1Q9Y2W3 748 aa9.08□□□□□ -0.96
ATXN3-235ENST00000556082 RBBP6Q7Z6E9 1792 aaKnown RBP9.08□□□□□ -0.96
ATXN3-235ENST00000556082 ZMYM2Q9UBW7 1377 aa9.08□□□□□ -0.96
ATXN3-235ENST00000556082 IGKV6D-21A0A0A0MT36 114 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 BACH1O14867 736 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 NOL4O94818 638 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 SLU7O95391 586 aaKnown RBP9.07□□□□□ -0.96
ATXN3-235ENST00000556082 ANXA13P27216 316 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 CASQ1P31415 396 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 ALDH5A1P51649 535 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-235ENST00000556082 NCKAP1LP55160 1127 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 ACTR2P61160 394 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 FKBP1BP68106 108 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 FOXK2Q01167 660 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 CENPCQ03188 943 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 ENPEPQ07075 957 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 KCNA1Q09470 495 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 SNAPC2Q13487 334 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 LBRQ14739 615 aaKnown RBP9.07□□□□□ -0.96
ATXN3-235ENST00000556082 UGCGQ16739 394 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 ZC2HC1CQ53FD0 456 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-235ENST00000556082 XKR9Q5GH70 373 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 XKR3Q5GH77 459 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 GPAT2Q6NUI2 795 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 PDXDC1Q6P996 788 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 KCNV1Q6PIU1 500 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 GADL1Q6ZQY3 521 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 ANO5Q75V66 913 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 MCPH1Q8NEM0 835 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 SHCBP1Q8NEM2 672 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 MORC4Q8TE76 937 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 KIFAP3Q92845 792 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 SLC35C1Q96A29 364 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 ERO1AQ96HE7 468 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 CLMNQ96JQ2 1002 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 ACCSQ96QU6 501 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 MPHOSPH6Q99547 160 aaKnown RBP9.07□□□□□ -0.96
ATXN3-235ENST00000556082 CFHR5Q9BXR6 569 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 MROH8Q9H579 483 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 BCAS3Q9H6U6 928 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 NHEJ1Q9H9Q4 299 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-235ENST00000556082 FAM207AQ9NSI2 230 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-235ENST00000556082 AIPL1Q9NZN9 384 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 RBPJLQ9UBG7 517 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 REXO2Q9Y3B8 237 aaKnown RBP9.07□□□□□ -0.96
ATXN3-235ENST00000556082 PPME1Q9Y570 386 aa9.07□□□□□ -0.96
ATXN3-235ENST00000556082 MAFBQ9Y5Q3 323 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-235ENST00000556082 A0A0G2JMZ2 1700 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 DNAJC25-GNG10A0A024R161 153 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 H0YCG3 227 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 RBAK-RBAKDNI3L0D1 243 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 EPHB6O15197 1021 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 PMM2O15305 246 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 ZNF862O60290 1169 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 IPO7O95373 1038 aaKnown RBP9.06□□□□□ -0.96
ATXN3-235ENST00000556082 IGHA1P01876 353 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 SUPT20HL2P0C7V6 817 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 SMTNP53814 917 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 TUBB4BP68371 445 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 CNTN2Q02246 1040 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 NEDD9Q14511 834 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 ASTE1Q2TB18 679 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-235ENST00000556082 ARHGAP29Q52LW3 1261 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 SWSAP1Q6NVH7 229 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 GBP6Q6ZN66 633 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 RRAGAQ7L523 313 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 CACNA2D4Q7Z3S7 1137 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 HAUS6Q7Z4H7 955 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 FAM186BQ8IYM0 893 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 TXLNBQ8N3L3 684 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 PHTF2Q8N3S3 785 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 SMCR8Q8TEV9 937 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-235ENST00000556082 OPTNQ96CV9 577 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 CCDC42Q96M95 316 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 CCDC43Q96MW1 224 aaKnown RBP9.06□□□□□ -0.96
ATXN3-235ENST00000556082 WDR24Q96S15 920 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 NIFKQ9BYG3 293 aaKnown RBP9.06□□□□□ -0.96
ATXN3-235ENST00000556082 GANQ9H2C0 597 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 GABBR1Q9UBS5 961 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 EXOC7Q9UPT5 735 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 USP20Q9Y2K6 914 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 FRMD4BQ9Y2L6 1034 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 HRH3Q9Y5N1 445 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 BZW2Q9Y6E2 419 aaKnown RBP9.06□□□□□ -0.96
ATXN3-235ENST00000556082 DNMT3AQ9Y6K1 912 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-235ENST00000556082 LOC285556D6RIA3 1793 aa9.06□□□□□ -0.96
ATXN3-235ENST00000556082 IGSF9BQ9UPX0 1349 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 LOXHD1Q8IVV2 1947 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms