RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 SUGP1Q8IWZ8 645 aaKnown RBP21.93■■□□□ 1.1
PRKCH-219ENST00000555906 ASIC4Q96FT7 647 aa21.93■■□□□ 1.1
PRKCH-219ENST00000555906 EIF2AQ9BY44 585 aaKnown RBP21.93■■□□□ 1.1
PRKCH-219ENST00000555906 CSRNP2Q9H175 543 aa21.93■■□□□ 1.1
PRKCH-219ENST00000555906 TSHZ2Q9NRE2 1034 aa21.93■■□□□ 1.1
PRKCH-219ENST00000555906 ZMYM2Q9UBW7 1377 aa21.93■■□□□ 1.1
PRKCH-219ENST00000555906 FAN1Q9Y2M0 1017 aa21.93■■□□□ 1.1
PRKCH-219ENST00000555906 MYO10Q9HD67 2058 aa21.92■■□□□ 1.1
PRKCH-219ENST00000555906 C2CD4DB7Z1M9 353 aa21.92■■□□□ 1.1
PRKCH-219ENST00000555906 NRP1O14786 923 aa21.92■■□□□ 1.1
PRKCH-219ENST00000555906 GLRA2P23416 452 aa21.92■■□□□ 1.1
PRKCH-219ENST00000555906 MLH1P40692 756 aa21.92■■□□□ 1.1
PRKCH-219ENST00000555906 ZBTB33Q86T24 672 aa21.92■■□□□ 1.1
PRKCH-219ENST00000555906 FBXL6Q8N531 539 aa21.92■■□□□ 1.1
PRKCH-219ENST00000555906 CPB2Q96IY4 423 aa21.92■■□□□ 1.1
PRKCH-219ENST00000555906 HERC2P3Q9BVR0 1158 aa21.92■■□□□ 1.1
PRKCH-219ENST00000555906 EMILIN2Q9BXX0 1053 aa21.92■■□□□ 1.1
PRKCH-219ENST00000555906 SFXN1Q9H9B4 322 aa21.92■■□□□ 1.1
PRKCH-219ENST00000555906 MARCH5Q9NX47 278 aa21.92■■□□□ 1.1
PRKCH-219ENST00000555906 ARL5CA6NH57 179 aa21.91■■□□□ 1.1
PRKCH-219ENST00000555906 SOD2P04179 222 aa21.91■■□□□ 1.1
PRKCH-219ENST00000555906 ALDH2P05091 517 aa21.91■■□□□ 1.1
PRKCH-219ENST00000555906 XRCC6P12956 609 aaKnown RBP eCLIP21.91■■□□□ 1.1
PRKCH-219ENST00000555906 ARF4P18085 180 aaPredicted RBP21.91■■□□□ 1.1
PRKCH-219ENST00000555906 DSC1Q08554 894 aa21.91■■□□□ 1.1
PRKCH-219ENST00000555906 SAFBQ15424 915 aaKnown RBP eCLIP21.91■■□□□ 1.1
PRKCH-219ENST00000555906 CABP7Q86V35 215 aa21.91■■□□□ 1.1
PRKCH-219ENST00000555906 COLGALT2Q8IYK4 626 aa21.91■■□□□ 1.1
PRKCH-219ENST00000555906 HACE1Q8IYU2 909 aa21.91■■□□□ 1.1
PRKCH-219ENST00000555906 TDRD5Q8NAT2 981 aaKnown RBP21.91■■□□□ 1.1
PRKCH-219ENST00000555906 POLR3FQ9H1D9 316 aaPredicted RBP21.91■■□□□ 1.1
PRKCH-219ENST00000555906 TMEM60Q9H2L4 133 aa21.91■■□□□ 1.1
PRKCH-219ENST00000555906 TUFT1Q9NNX1 390 aa21.91■■□□□ 1.1
PRKCH-219ENST00000555906 USO1O60763 962 aaKnown RBP21.9■■□□□ 1.1
PRKCH-219ENST00000555906 LILRB3O75022 631 aa21.9■■□□□ 1.1
PRKCH-219ENST00000555906 URODP06132 367 aa21.9■■□□□ 1.1
PRKCH-219ENST00000555906 CLCN4P51793 760 aa21.9■■□□□ 1.1
PRKCH-219ENST00000555906 ORC2Q13416 577 aaPredicted RBP21.9■■□□□ 1.1
PRKCH-219ENST00000555906 MTMR3Q13615 1198 aa21.9■■□□□ 1.1
PRKCH-219ENST00000555906 RNF168Q8IYW5 571 aaPredicted RBP21.9■■□□□ 1.1
PRKCH-219ENST00000555906 C12orf76Q8N812 135 aaPredicted RBP21.9■■□□□ 1.1
PRKCH-219ENST00000555906 PIGOQ8TEQ8 1089 aa21.9■■□□□ 1.1
PRKCH-219ENST00000555906 KLHL5Q96PQ7 755 aa21.9■■□□□ 1.1
PRKCH-219ENST00000555906 GAD1Q99259 594 aa21.9■■□□□ 1.1
PRKCH-219ENST00000555906 PRRX2Q99811 253 aa21.9■■□□□ 1.1
PRKCH-219ENST00000555906 TRIM6Q9C030 488 aaPredicted RBP21.9■■□□□ 1.1
PRKCH-219ENST00000555906 NXF3Q9H4D5 531 aaKnown RBP21.9■■□□□ 1.1
PRKCH-219ENST00000555906 MRPL17Q9NRX2 175 aaKnown RBP21.9■■□□□ 1.1
PRKCH-219ENST00000555906 SORCS3Q9UPU3 1222 aa21.9■■□□□ 1.1
PRKCH-219ENST00000555906 USTQ9Y2C2 406 aa21.9■■□□□ 1.1
PRKCH-219ENST00000555906 GIT1Q9Y2X7 761 aa21.9■■□□□ 1.1
PRKCH-219ENST00000555906 HES2Q9Y543 173 aa21.9■■□□□ 1.1
PRKCH-219ENST00000555906 SSBP05455 408 aaKnown RBP eCLIP21.89■■□□□ 1.09
PRKCH-219ENST00000555906 CNPP09543 421 aaKnown RBP21.89■■□□□ 1.09
PRKCH-219ENST00000555906 WEE2P0C1S8 567 aa21.89■■□□□ 1.09
PRKCH-219ENST00000555906 SPATA31C1P0DKV0 1188 aa21.89■■□□□ 1.09
PRKCH-219ENST00000555906 MCM7P33993 719 aa21.89■■□□□ 1.09
PRKCH-219ENST00000555906 SCNN1GP51170 649 aa21.89■■□□□ 1.09
PRKCH-219ENST00000555906 ATAT1Q5SQI0 421 aa21.89■■□□□ 1.09
PRKCH-219ENST00000555906 SLC27A1Q6PCB7 646 aa21.89■■□□□ 1.09
PRKCH-219ENST00000555906 UBALD2Q8IYN6 164 aa21.89■■□□□ 1.09
PRKCH-219ENST00000555906 KREMEN2Q8NCW0 462 aa21.89■■□□□ 1.09
PRKCH-219ENST00000555906 MCPH1Q8NEM0 835 aa21.89■■□□□ 1.09
PRKCH-219ENST00000555906 ZFP42Q96MM3 310 aa21.89■■□□□ 1.09
PRKCH-219ENST00000555906 RNF39Q9H2S5 420 aa21.89■■□□□ 1.09
PRKCH-219ENST00000555906 DBR1Q9UK59 544 aaKnown RBP21.89■■□□□ 1.09
PRKCH-219ENST00000555906 LIMCH1Q9UPQ0 1083 aa21.89■■□□□ 1.09
PRKCH-219ENST00000555906 SSX2IPQ9Y2D8 614 aa21.89■■□□□ 1.09
PRKCH-219ENST00000555906 PRG3Q9Y2Y8 225 aaPredicted RBP21.89■■□□□ 1.09
PRKCH-219ENST00000555906 MTCL1Q9Y4B5 1905 aaKnown RBP21.88■■□□□ 1.09
PRKCH-219ENST00000555906 B4GALT5O43286 388 aa21.88■■□□□ 1.09
PRKCH-219ENST00000555906 EFEMP2O95967 443 aa21.88■■□□□ 1.09
PRKCH-219ENST00000555906 KLRC2P26717 231 aa21.88■■□□□ 1.09
PRKCH-219ENST00000555906 OR1G1P47890 313 aa21.88■■□□□ 1.09
PRKCH-219ENST00000555906 CDCA2Q69YH5 1023 aaPredicted RBP21.88■■□□□ 1.09
PRKCH-219ENST00000555906 PPP4R3CPQ6ZMV5 832 aa21.88■■□□□ 1.09
PRKCH-219ENST00000555906 ZDHHC14Q8IZN3 488 aa21.88■■□□□ 1.09
PRKCH-219ENST00000555906 PRSS33Q8NF86 280 aa21.88■■□□□ 1.09
PRKCH-219ENST00000555906 C8orf76Q96K31 380 aa21.88■■□□□ 1.09
PRKCH-219ENST00000555906 PRIMPOLQ96LW4 560 aa21.88■■□□□ 1.09
PRKCH-219ENST00000555906 LLPHQ9BRT6 129 aaKnown RBP21.88■■□□□ 1.09
PRKCH-219ENST00000555906 CACNA1HO95180 2353 aa21.88■■□□□ 1.09
PRKCH-219ENST00000555906 LRRIQ4A6NIV6 560 aa21.87■■□□□ 1.09
PRKCH-219ENST00000555906 SEC24BO95487 1268 aa21.87■■□□□ 1.09
PRKCH-219ENST00000555906 OR52Z1P0C646 297 aa21.87■■□□□ 1.09
PRKCH-219ENST00000555906 PTPN5P54829 565 aa21.87■■□□□ 1.09
PRKCH-219ENST00000555906 GUCY1B3Q02153 619 aa21.87■■□□□ 1.09
PRKCH-219ENST00000555906 KANK3Q6NY19 840 aa21.87■■□□□ 1.09
PRKCH-219ENST00000555906 TMC5Q6UXY8 1006 aa21.87■■□□□ 1.09
PRKCH-219ENST00000555906 GPR149Q86SP6 731 aa21.87■■□□□ 1.09
PRKCH-219ENST00000555906 ALYREFQ86V81 257 aaKnown RBP21.87■■□□□ 1.09
PRKCH-219ENST00000555906 CATSPER3Q86XQ3 398 aa21.87■■□□□ 1.09
PRKCH-219ENST00000555906 CCDC83Q8IWF9 413 aa21.87■■□□□ 1.09
PRKCH-219ENST00000555906 RPS6KC1Q96S38 1066 aa21.87■■□□□ 1.09
PRKCH-219ENST00000555906 POLR3CQ9BUI4 534 aaPredicted RBP21.87■■□□□ 1.09
PRKCH-219ENST00000555906 APOL6Q9BWW8 343 aa21.87■■□□□ 1.09
PRKCH-219ENST00000555906 FOXP1Q9H334 677 aaPredicted RBP21.87■■□□□ 1.09
PRKCH-219ENST00000555906 GPRC5CQ9NQ84 441 aa21.87■■□□□ 1.09
PRKCH-219ENST00000555906 PRMT7Q9NVM4 692 aaPredicted RBP21.87■■□□□ 1.09
PRKCH-219ENST00000555906 A0A1B0GUA9 196 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms