RNA–Protein interactions for RNA: ENST00000555116.5

SHMT2-217, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-217ENST00000555116 KBTBD4Q9NVX7 518 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 LARSQ9P2J5 1176 aaKnown RBP15.65■□□□□ 0.1
SHMT2-217ENST00000555116 IPPQ9Y573 584 aa15.65■□□□□ 0.1
SHMT2-217ENST00000555116 POLR2DO15514 142 aaKnown RBP15.64■□□□□ 0.09
SHMT2-217ENST00000555116 TRAK2O60296 914 aa15.64■□□□□ 0.09
SHMT2-217ENST00000555116 MAPTP10636 758 aaKnown RBP15.64■□□□□ 0.09
SHMT2-217ENST00000555116 CMA1P23946 247 aa15.64■□□□□ 0.09
SHMT2-217ENST00000555116 SMTNP53814 917 aa15.64■□□□□ 0.09
SHMT2-217ENST00000555116 EEF1DP3Q658K8 133 aa15.64■□□□□ 0.09
SHMT2-217ENST00000555116 SLC27A1Q6PCB7 646 aa15.64■□□□□ 0.09
SHMT2-217ENST00000555116 MYCT1Q8N699 235 aa15.64■□□□□ 0.09
SHMT2-217ENST00000555116 IQUBQ8NA54 791 aa15.64■□□□□ 0.09
SHMT2-217ENST00000555116 CNNM3Q8NE01 707 aa15.64■□□□□ 0.09
SHMT2-217ENST00000555116 HELQQ8TDG4 1101 aa15.64■□□□□ 0.09
SHMT2-217ENST00000555116 PGBD4Q96DM1 585 aa15.64■□□□□ 0.09
SHMT2-217ENST00000555116 FIZ1Q96SL8 496 aa15.64■□□□□ 0.09
SHMT2-217ENST00000555116 HCSTQ9UBK5 93 aa15.64■□□□□ 0.09
SHMT2-217ENST00000555116 CDH23Q9H251 3354 aa15.64■□□□□ 0.09
SHMT2-217ENST00000555116 PLXNA4Q9HCM2 1894 aa15.63■□□□□ 0.09
SHMT2-217ENST00000555116 N4BP3O15049 544 aa15.63■□□□□ 0.09
SHMT2-217ENST00000555116 LPXNO60711 386 aa15.63■□□□□ 0.09
SHMT2-217ENST00000555116 TBCAO75347 108 aaKnown RBP15.63■□□□□ 0.09
SHMT2-217ENST00000555116 NPTXRO95502 500 aa15.63■□□□□ 0.09
SHMT2-217ENST00000555116 BMPR1AP36894 532 aa15.63■□□□□ 0.09
SHMT2-217ENST00000555116 LRRC55Q6ZSA7 311 aa15.63■□□□□ 0.09
SHMT2-217ENST00000555116 STAMQ92783 540 aa15.63■□□□□ 0.09
SHMT2-217ENST00000555116 RNF39Q9H2S5 420 aa15.63■□□□□ 0.09
SHMT2-217ENST00000555116 TNMDQ9H2S6 317 aa15.63■□□□□ 0.09
SHMT2-217ENST00000555116 CWH43Q9H720 699 aa15.63■□□□□ 0.09
SHMT2-217ENST00000555116 TYW1Q9NV66 732 aaKnown RBP15.63■□□□□ 0.09
SHMT2-217ENST00000555116 KCNH3Q9ULD8 1083 aa15.63■□□□□ 0.09
SHMT2-217ENST00000555116 HES2Q9Y543 173 aa15.63■□□□□ 0.09
SHMT2-217ENST00000555116 CITO14578 2027 aa15.63■□□□□ 0.09
SHMT2-217ENST00000555116 TRANK1O15050 2925 aa15.63■□□□□ 0.09
SHMT2-217ENST00000555116 FAM237AA0A1B0GTK4 181 aa15.63■□□□□ 0.09
SHMT2-217ENST00000555116 OFD1O75665 1012 aa15.63■□□□□ 0.09
SHMT2-217ENST00000555116 HAUS6Q7Z4H7 955 aa15.63■□□□□ 0.09
SHMT2-217ENST00000555116 ABI1Q8IZP0 508 aa15.63■□□□□ 0.09
SHMT2-217ENST00000555116 FBXO22Q8NEZ5 403 aa15.63■□□□□ 0.09
SHMT2-217ENST00000555116 ACO2Q99798 780 aaKnown RBP15.63■□□□□ 0.09
SHMT2-217ENST00000555116 NXF3Q9H4D5 531 aaKnown RBP15.63■□□□□ 0.09
SHMT2-217ENST00000555116 ZHX3Q9H4I2 956 aa15.63■□□□□ 0.09
SHMT2-217ENST00000555116 HPSEQ9Y251 543 aa15.63■□□□□ 0.09
SHMT2-217ENST00000555116 STXBP5LQ9Y2K9 1186 aa15.63■□□□□ 0.09
SHMT2-217ENST00000555116 RWDD3Q9Y3V2 267 aa15.63■□□□□ 0.09
SHMT2-217ENST00000555116 A0A1B0GVL5 298 aa15.62■□□□□ 0.09
SHMT2-217ENST00000555116 A0A1W2PQ27 194 aa15.62■□□□□ 0.09
SHMT2-217ENST00000555116 A0A1W2PQ64 194 aa15.62■□□□□ 0.09
SHMT2-217ENST00000555116 A0A1W2PQD8 194 aa15.62■□□□□ 0.09
SHMT2-217ENST00000555116 C5orf67F2Z3F1 127 aa15.62■□□□□ 0.09
SHMT2-217ENST00000555116 SLC34A2O95436 690 aa15.62■□□□□ 0.09
SHMT2-217ENST00000555116 ITGA4P13612 1032 aa15.62■□□□□ 0.09
SHMT2-217ENST00000555116 PFKFB1P16118 471 aa15.62■□□□□ 0.09
SHMT2-217ENST00000555116 CTNNB1P35222 781 aa15.62■□□□□ 0.09
SHMT2-217ENST00000555116 TMEM132AQ24JP5 1023 aa15.62■□□□□ 0.09
SHMT2-217ENST00000555116 ATF7IP2Q5U623 682 aa15.62■□□□□ 0.09
SHMT2-217ENST00000555116 SFR1Q86XK3 245 aa15.62■□□□□ 0.09
SHMT2-217ENST00000555116 LRRC43Q8N309 656 aa15.62■□□□□ 0.09
SHMT2-217ENST00000555116 GDPD5Q8WTR4 605 aa15.62■□□□□ 0.09
SHMT2-217ENST00000555116 GAS2L1Q99501 681 aaPredicted RBP15.62■□□□□ 0.09
SHMT2-217ENST00000555116 TARS2Q9BW92 718 aaKnown RBP15.62■□□□□ 0.09
SHMT2-217ENST00000555116 MRPL4Q9BYD3 311 aaKnown RBP15.62■□□□□ 0.09
SHMT2-217ENST00000555116 PTPRHQ9HD43 1115 aa15.62■□□□□ 0.09
SHMT2-217ENST00000555116 TNFSF13BQ9Y275 285 aa15.62■□□□□ 0.09
SHMT2-217ENST00000555116 FRMD3A2A2Y4 597 aa15.61■□□□□ 0.09
SHMT2-217ENST00000555116 H0YCG3 227 aa15.61■□□□□ 0.09
SHMT2-217ENST00000555116 RB1P06400 928 aa15.61■□□□□ 0.09
SHMT2-217ENST00000555116 PTMSP20962 102 aa15.61■□□□□ 0.09
SHMT2-217ENST00000555116 GLB1LQ6UWU2 654 aa15.61■□□□□ 0.09
SHMT2-217ENST00000555116 RSPH1Q8WYR4 309 aa15.61■□□□□ 0.09
SHMT2-217ENST00000555116 TRIM6Q9C030 488 aaPredicted RBP15.61■□□□□ 0.09
SHMT2-217ENST00000555116 RSAD1Q9HA92 442 aa15.61■□□□□ 0.09
SHMT2-217ENST00000555116 MAGEF1Q9HAY2 307 aa15.61■□□□□ 0.09
SHMT2-217ENST00000555116 H3BNC9 293 aa15.61■□□□□ 0.09
SHMT2-217ENST00000555116 K7ENM7 598 aa15.61■□□□□ 0.09
SHMT2-217ENST00000555116 ABLIM1O14639 778 aa15.61■□□□□ 0.09
SHMT2-217ENST00000555116 INPPL1O15357 1258 aa15.61■□□□□ 0.09
SHMT2-217ENST00000555116 ACTN4O43707 911 aaKnown RBP15.61■□□□□ 0.09
SHMT2-217ENST00000555116 FOSL2P15408 326 aa15.61■□□□□ 0.09
SHMT2-217ENST00000555116 GAP43P17677 238 aa15.61■□□□□ 0.09
SHMT2-217ENST00000555116 POU3F3P20264 500 aaPredicted RBP15.61■□□□□ 0.09
SHMT2-217ENST00000555116 PROZP22891 400 aa15.61■□□□□ 0.09
SHMT2-217ENST00000555116 NMT1P30419 496 aaKnown RBP15.61■□□□□ 0.09
SHMT2-217ENST00000555116 AFF1P51825 1210 aaKnown RBP15.61■□□□□ 0.09
SHMT2-217ENST00000555116 STRN3Q13033 797 aa15.61■□□□□ 0.09
SHMT2-217ENST00000555116 NOMO2Q5JPE7 1267 aa15.61■□□□□ 0.09
SHMT2-217ENST00000555116 CNNM4Q6P4Q7 775 aa15.61■□□□□ 0.09
SHMT2-217ENST00000555116 FAM178BQ8IXR5 827 aa15.61■□□□□ 0.09
SHMT2-217ENST00000555116 PYM1Q9BRP8 204 aaKnown RBP15.61■□□□□ 0.09
SHMT2-217ENST00000555116 APOL6Q9BWW8 343 aa15.61■□□□□ 0.09
SHMT2-217ENST00000555116 PLVAPQ9BX97 442 aa15.61■□□□□ 0.09
SHMT2-217ENST00000555116 TRIM9Q9C026 710 aa15.61■□□□□ 0.09
SHMT2-217ENST00000555116 LRRC27Q9C0I9 530 aa15.61■□□□□ 0.09
SHMT2-217ENST00000555116 ST6GALNAC4Q9H4F1 302 aa15.61■□□□□ 0.09
SHMT2-217ENST00000555116 SEL1LQ9UBV2 794 aa15.61■□□□□ 0.09
SHMT2-217ENST00000555116 SCP2P22307 547 aa15.6■□□□□ 0.09
SHMT2-217ENST00000555116 GTF2BQ00403 316 aa15.6■□□□□ 0.09
SHMT2-217ENST00000555116 GPM6BQ13491 265 aa15.6■□□□□ 0.09
SHMT2-217ENST00000555116 DCAF4L1Q3SXM0 396 aa15.6■□□□□ 0.09
SHMT2-217ENST00000555116 COLGALT1Q8NBJ5 622 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms