RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 ADSSL1Q8N142 457 aa18.02■□□□□ 0.47
SPTLC2-203ENST00000554901 TARS2Q9BW92 718 aaKnown RBP18.02■□□□□ 0.47
SPTLC2-203ENST00000554901 TSPYL2Q9H2G4 693 aaPredicted RBP18.02■□□□□ 0.47
SPTLC2-203ENST00000554901 PTPRHQ9HD43 1115 aa18.02■□□□□ 0.47
SPTLC2-203ENST00000554901 C1orf112Q9NSG2 853 aa18.02■□□□□ 0.47
SPTLC2-203ENST00000554901 DACH1Q9UI36 760 aa18.02■□□□□ 0.47
SPTLC2-203ENST00000554901 STYXL1Q9Y6J8 313 aa18.02■□□□□ 0.47
SPTLC2-203ENST00000554901 PDXKO00764 312 aa18.01■□□□□ 0.47
SPTLC2-203ENST00000554901 PSMA7O14818 248 aa18.01■□□□□ 0.47
SPTLC2-203ENST00000554901 CAPN15O75808 1086 aa18.01■□□□□ 0.47
SPTLC2-203ENST00000554901 EDN1P05305 212 aa18.01■□□□□ 0.47
SPTLC2-203ENST00000554901 SKIP12755 728 aa18.01■□□□□ 0.47
SPTLC2-203ENST00000554901 HOXD13P35453 343 aa18.01■□□□□ 0.47
SPTLC2-203ENST00000554901 PRCPP42785 496 aa18.01■□□□□ 0.47
SPTLC2-203ENST00000554901 RAB27AP51159 221 aa18.01■□□□□ 0.47
SPTLC2-203ENST00000554901 DCAF4L1Q3SXM0 396 aa18.01■□□□□ 0.47
SPTLC2-203ENST00000554901 FOXR2Q6PJQ5 311 aa18.01■□□□□ 0.47
SPTLC2-203ENST00000554901 MPZL3Q6UWV2 235 aa18.01■□□□□ 0.47
SPTLC2-203ENST00000554901 TMEM174Q8WUU8 243 aa18.01■□□□□ 0.47
SPTLC2-203ENST00000554901 DHTKD1Q96HY7 919 aaPredicted RBP18.01■□□□□ 0.47
SPTLC2-203ENST00000554901 PDZD7Q9H5P4 517 aa18.01■□□□□ 0.47
SPTLC2-203ENST00000554901 RGS18Q9NS28 235 aa18.01■□□□□ 0.47
SPTLC2-203ENST00000554901 TYW1Q9NV66 732 aaKnown RBP18.01■□□□□ 0.47
SPTLC2-203ENST00000554901 KIAA0391O15091 583 aaKnown RBP18■□□□□ 0.47
SPTLC2-203ENST00000554901 CLDN3O15551 220 aa18■□□□□ 0.47
SPTLC2-203ENST00000554901 MLLT1Q03111 559 aaPredicted RBP18■□□□□ 0.47
SPTLC2-203ENST00000554901 HSP90AA2PQ14568 343 aaPredicted RBP18■□□□□ 0.47
SPTLC2-203ENST00000554901 ISM2Q6H9L7 571 aa18■□□□□ 0.47
SPTLC2-203ENST00000554901 TWF2Q6IBS0 349 aaKnown RBP18■□□□□ 0.47
SPTLC2-203ENST00000554901 SLC24A5Q71RS6 500 aa18■□□□□ 0.47
SPTLC2-203ENST00000554901 SMYD4Q8IYR2 804 aaPredicted RBP18■□□□□ 0.47
SPTLC2-203ENST00000554901 ADAM2Q99965 735 aa18■□□□□ 0.47
SPTLC2-203ENST00000554901 KCTD10Q9H3F6 313 aa18■□□□□ 0.47
SPTLC2-203ENST00000554901 ANO10Q9NW15 660 aa18■□□□□ 0.47
SPTLC2-203ENST00000554901 TRAF3IP3Q9Y228 551 aa18■□□□□ 0.47
SPTLC2-203ENST00000554901 SCN5AQ14524 2016 aa18■□□□□ 0.47
SPTLC2-203ENST00000554901 ZMYM2Q9UBW7 1377 aa17.99■□□□□ 0.47
SPTLC2-203ENST00000554901 A0A0U1RQF3 1178 aa17.99■□□□□ 0.47
SPTLC2-203ENST00000554901 TTLL13PA6NNM8 815 aa17.99■□□□□ 0.47
SPTLC2-203ENST00000554901 PPP1R3GB7ZBB8 358 aa17.99■□□□□ 0.47
SPTLC2-203ENST00000554901 ZNF623O75123 536 aa17.99■□□□□ 0.47
SPTLC2-203ENST00000554901 FGBP02675 491 aa17.99■□□□□ 0.47
SPTLC2-203ENST00000554901 MCF2P10911 925 aa17.99■□□□□ 0.47
SPTLC2-203ENST00000554901 GARTP22102 1010 aa17.99■□□□□ 0.47
SPTLC2-203ENST00000554901 MCL1Q07820 350 aa17.99■□□□□ 0.47
SPTLC2-203ENST00000554901 MYBPC2Q14324 1141 aa17.99■□□□□ 0.47
SPTLC2-203ENST00000554901 KYAT1Q16773 422 aa17.99■□□□□ 0.47
SPTLC2-203ENST00000554901 CENPPQ6IPU0 288 aa17.99■□□□□ 0.47
SPTLC2-203ENST00000554901 C16orf59Q7L2K0 433 aa17.99■□□□□ 0.47
SPTLC2-203ENST00000554901 NELFCDQ8IXH7 590 aa17.99■□□□□ 0.47
SPTLC2-203ENST00000554901 C12orf56Q8IXR9 622 aa17.99■□□□□ 0.47
SPTLC2-203ENST00000554901 CPB2Q96IY4 423 aa17.99■□□□□ 0.47
SPTLC2-203ENST00000554901 TCHPQ9BT92 498 aa17.99■□□□□ 0.47
SPTLC2-203ENST00000554901 TET1Q8NFU7 2136 aa17.99■□□□□ 0.47
SPTLC2-203ENST00000554901 ABLIM1O14639 778 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 TGFB1I1O43294 461 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 MGEA5O60502 916 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 MAGEA10P43363 369 aaPredicted RBP17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 FAM189BP81408 668 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 LRRC63Q05C16 580 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 NOLC1Q14978 699 aaKnown RBP eCLIP17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 STX1AQ16623 288 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 NFIL3Q16649 462 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 ZSCAN23Q3MJ62 389 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 ZNF568Q3ZCX4 644 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 TMEM240Q5SV17 173 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 SLC39A4Q6P5W5 647 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 MTIF3Q9H2K0 278 aaKnown RBP17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 MAPK8IP1Q9UQF2 711 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 CEP290O15078 2479 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 A0A0B4J269 797 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 C9IYK1 514 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 ANKRD63C9JTQ0 380 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 ENPP3O14638 875 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 CALUO43852 315 aaPredicted RBP17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 CCDC192P0DO97 292 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 ACRP10323 421 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 CCNE1P24864 410 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 EDRF1Q3B7T1 1238 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 UBXN11Q5T124 520 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 EEF1DP3Q658K8 133 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 ZNF365Q70YC5 407 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 RTN4RL1Q86UN2 441 aaPredicted RBP17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 SLC9A9Q8IVB4 645 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 HACE1Q8IYU2 909 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 TRIM6Q9C030 488 aaPredicted RBP17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 CDT1Q9H211 546 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 ELAC1Q9H777 363 aaKnown RBP17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 AGPAT3Q9NRZ7 376 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 FAM105AQ9NUU6 356 aa17.98■□□□□ 0.47
SPTLC2-203ENST00000554901 BICDL2A1A5D9 508 aa17.97■□□□□ 0.47
SPTLC2-203ENST00000554901 H0YGN5 161 aa17.97■□□□□ 0.47
SPTLC2-203ENST00000554901 EOMESO95936 686 aa17.97■□□□□ 0.47
SPTLC2-203ENST00000554901 LDHAP00338 332 aaKnown RBP17.97■□□□□ 0.47
SPTLC2-203ENST00000554901 CD44P16070 742 aaKnown RBP17.97■□□□□ 0.47
SPTLC2-203ENST00000554901 ERCC5P28715 1186 aaPredicted RBP17.97■□□□□ 0.47
SPTLC2-203ENST00000554901 POU5F1Q01860 360 aaKnown RBP17.97■□□□□ 0.47
SPTLC2-203ENST00000554901 PAK1Q13153 545 aa17.97■□□□□ 0.47
SPTLC2-203ENST00000554901 TCTN1Q2MV58 587 aa17.97■□□□□ 0.47
SPTLC2-203ENST00000554901 DPCR1Q3MIW9 517 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms