RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 FZD1Q9UP38 647 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 MRPL11Q9Y3B7 192 aaKnown RBP12.75□□□□□ -0.37
XRCC3-208ENST00000554811 SMCHD1A6NHR9 2005 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 MYH1P12882 1939 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 MYH4Q9Y623 1939 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 ANKRD62A6NC57 917 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 CTNNA2P26232 953 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 DYNLT1P63172 113 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 KYNUQ16719 465 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 SPRED3Q2MJR0 410 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 COBLL1Q53SF7 1204 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 DCAF12L1Q5VU92 463 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 PRAMEF18Q5VWM3 479 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 RNF207Q6ZRF8 634 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 XXYLT1Q8NBI6 393 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 FNBP1Q96RU3 617 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 C11orf70Q9BRQ4 267 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 VAV3Q9UKW4 847 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 IGKV6D-41A0A0C4DH26 115 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 HSPA1LP34931 641 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 NAA25Q14CX7 972 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 HHIPL2Q6UWX4 724 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 SIAH1Q8IUQ4 282 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 CHMP6Q96FZ7 201 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 ZNF277Q9NRM2 450 aaPredicted RBP12.74□□□□□ -0.37
XRCC3-208ENST00000554811 MYH7BA7E2Y1 1941 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 WDR91A4D1P6 747 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 ECEL1O95672 775 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 TMEM253P0C7T8 217 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 CD58P19256 250 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 CRY2Q49AN0 593 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 XPO6Q96QU8 1125 aaKnown RBP12.74□□□□□ -0.37
XRCC3-208ENST00000554811 KCNH7Q9NS40 1196 aa12.74□□□□□ -0.37
XRCC3-208ENST00000554811 DENND3A2RUS2 1198 aa12.73□□□□□ -0.37
XRCC3-208ENST00000554811 ANKRD63C9JTQ0 380 aa12.73□□□□□ -0.37
XRCC3-208ENST00000554811 ERFP50548 548 aa12.73□□□□□ -0.37
XRCC3-208ENST00000554811 TMED2Q15363 201 aa12.73□□□□□ -0.37
XRCC3-208ENST00000554811 SEPT7Q16181 437 aaKnown RBP12.73□□□□□ -0.37
XRCC3-208ENST00000554811 C1orf186Q6ZWK4 172 aa12.73□□□□□ -0.37
XRCC3-208ENST00000554811 PODNQ7Z5L7 613 aa12.73□□□□□ -0.37
XRCC3-208ENST00000554811 COL23A1Q86Y22 540 aaPredicted RBP12.73□□□□□ -0.37
XRCC3-208ENST00000554811 CEP170P1Q96L14 293 aa12.73□□□□□ -0.37
XRCC3-208ENST00000554811 ACCSQ96QU6 501 aa12.73□□□□□ -0.37
XRCC3-208ENST00000554811 FGFR1OP2Q9NVK5 253 aa12.73□□□□□ -0.37
XRCC3-208ENST00000554811 TRPC6Q9Y210 931 aa12.73□□□□□ -0.37
XRCC3-208ENST00000554811 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.73□□□□□ -0.37
XRCC3-208ENST00000554811 A6NNZ2 444 aa12.73□□□□□ -0.37
XRCC3-208ENST00000554811 SPAG7O75391 227 aa12.73□□□□□ -0.37
XRCC3-208ENST00000554811 CREB1P16220 341 aa12.73□□□□□ -0.37
XRCC3-208ENST00000554811 STX2P32856 288 aa12.73□□□□□ -0.37
XRCC3-208ENST00000554811 KRT17Q04695 432 aa12.73□□□□□ -0.37
XRCC3-208ENST00000554811 MTMR1Q13613 665 aa12.73□□□□□ -0.37
XRCC3-208ENST00000554811 TUBB8Q3ZCM7 444 aa12.73□□□□□ -0.37
XRCC3-208ENST00000554811 CCDC91Q7Z6B0 441 aa12.73□□□□□ -0.37
XRCC3-208ENST00000554811 COL14A1Q05707 1796 aaKnown RBP12.73□□□□□ -0.37
XRCC3-208ENST00000554811 PASKQ96RG2 1323 aa12.73□□□□□ -0.37
XRCC3-208ENST00000554811 TCP11X1B4DZS4 312 aa12.73□□□□□ -0.37
XRCC3-208ENST00000554811 MAPK7Q13164 816 aa12.73□□□□□ -0.37
XRCC3-208ENST00000554811 SPOPLQ6IQ16 392 aa12.73□□□□□ -0.37
XRCC3-208ENST00000554811 MASTLQ96GX5 879 aa12.73□□□□□ -0.37
XRCC3-208ENST00000554811 NT5C1BQ96P26 610 aa12.73□□□□□ -0.37
XRCC3-208ENST00000554811 SLC16A3O15427 465 aaKnown RBP12.72□□□□□ -0.37
XRCC3-208ENST00000554811 ACOT2P49753 483 aa12.72□□□□□ -0.37
XRCC3-208ENST00000554811 SMTNP53814 917 aa12.72□□□□□ -0.37
XRCC3-208ENST00000554811 SNCBQ16143 134 aa12.72□□□□□ -0.37
XRCC3-208ENST00000554811 KCNV1Q6PIU1 500 aa12.72□□□□□ -0.37
XRCC3-208ENST00000554811 EP400NLQ6ZTU2 488 aa12.72□□□□□ -0.37
XRCC3-208ENST00000554811 NOP9Q86U38 636 aaKnown RBP12.72□□□□□ -0.37
XRCC3-208ENST00000554811 NLGN1Q8N2Q7 840 aa12.72□□□□□ -0.37
XRCC3-208ENST00000554811 CCDC63Q8NA47 563 aa12.72□□□□□ -0.37
XRCC3-208ENST00000554811 TAS1R2Q8TE23 839 aa12.72□□□□□ -0.37
XRCC3-208ENST00000554811 ARHGEF2Q92974 986 aaKnown RBP12.72□□□□□ -0.37
XRCC3-208ENST00000554811 TATDN2Q93075 761 aa12.72□□□□□ -0.37
XRCC3-208ENST00000554811 KMT5AQ9NQR1 393 aa12.72□□□□□ -0.37
XRCC3-208ENST00000554811 SEPT9Q9UHD8 586 aaPredicted RBP12.72□□□□□ -0.37
XRCC3-208ENST00000554811 CEP83Q9Y592 693 aa12.72□□□□□ -0.37
XRCC3-208ENST00000554811 KRT15P19012 456 aa12.72□□□□□ -0.37
XRCC3-208ENST00000554811 CDC25CP30307 473 aa12.72□□□□□ -0.37
XRCC3-208ENST00000554811 MTERF2Q49AM1 385 aa12.72□□□□□ -0.37
XRCC3-208ENST00000554811 WDR78Q5VTH9 848 aa12.72□□□□□ -0.37
XRCC3-208ENST00000554811 ARHGEF16Q5VV41 709 aa12.72□□□□□ -0.37
XRCC3-208ENST00000554811 CALR3Q96L12 384 aaKnown RBP12.72□□□□□ -0.37
XRCC3-208ENST00000554811 ZDHHC15Q96MV8 337 aa12.72□□□□□ -0.37
XRCC3-208ENST00000554811 VPS37BQ9H9H4 285 aa12.72□□□□□ -0.37
XRCC3-208ENST00000554811 ZHX2Q9Y6X8 837 aa12.72□□□□□ -0.37
XRCC3-208ENST00000554811 LRRIQ4A6NIV6 560 aa12.72□□□□□ -0.37
XRCC3-208ENST00000554811 OSTNP61366 133 aa12.72□□□□□ -0.37
XRCC3-208ENST00000554811 INTS8Q75QN2 995 aaKnown RBP12.72□□□□□ -0.37
XRCC3-208ENST00000554811 EEPD1Q7L9B9 569 aa12.72□□□□□ -0.37
XRCC3-208ENST00000554811 TMEM117Q9H0C3 514 aa12.72□□□□□ -0.37
XRCC3-208ENST00000554811 ARAP2Q8WZ64 1704 aa12.71□□□□□ -0.37
XRCC3-208ENST00000554811 EZRP15311 586 aaKnown RBP12.71□□□□□ -0.37
XRCC3-208ENST00000554811 ECHS1P30084 290 aa12.71□□□□□ -0.37
XRCC3-208ENST00000554811 NT5C2P49902 561 aa12.71□□□□□ -0.37
XRCC3-208ENST00000554811 PPATQ06203 517 aa12.71□□□□□ -0.37
XRCC3-208ENST00000554811 Q4G0T1 1027 aa12.71□□□□□ -0.37
XRCC3-208ENST00000554811 HYIQ5T013 277 aa12.71□□□□□ -0.37
XRCC3-208ENST00000554811 SCARA5Q6ZMJ2 495 aa12.71□□□□□ -0.37
XRCC3-208ENST00000554811 RHOT2Q8IXI1 618 aa12.71□□□□□ -0.37
XRCC3-208ENST00000554811 ATP8B4Q8TF62 1192 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms