RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 ATP2B1P20020 1258 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 LSP1P33241 339 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 PSMC6P62333 389 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 ZNF252P-AS1Q0IIN9 211 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 BFSP1Q12934 665 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 MKRN3Q13064 507 aaKnown RBP3.74□□□□□ -1.81
SEC23A-207ENST00000554615 IFI16Q16666 785 aaKnown RBP3.74□□□□□ -1.81
SEC23A-207ENST00000554615 ANKRD20A8PQ5CZ79 823 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 TAF7LQ5H9L4 462 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 NAA35Q5VZE5 725 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 STEAP4Q687X5 459 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 FOXR1Q6PIV2 292 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 KRT26Q7Z3Y9 468 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 DZIP1Q86YF9 867 aaKnown RBP3.74□□□□□ -1.81
SEC23A-207ENST00000554615 ZFPM1Q8IX07 1006 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 SLC44A5Q8NCS7 719 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 TGFBRAP1Q8WUH2 860 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 ARL8AQ96BM9 186 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 WDR83Q9BRX9 315 aaKnown RBP3.74□□□□□ -1.81
SEC23A-207ENST00000554615 AMNQ9BXJ7 453 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 HAPLN2Q9GZV7 340 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 KATNBL1Q9H079 304 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 LHX5Q9H2C1 402 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 EPC1Q9H2F5 836 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 PABPC3Q9H361 631 aaKnown RBP3.74□□□□□ -1.81
SEC23A-207ENST00000554615 UNC45AQ9H3U1 944 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 FAM204AQ9H8W3 233 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 SUGCTQ9HAC7 445 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 COL20A1Q9P218 1284 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 COL1A2P08123 1366 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 EMSYQ7Z589 1322 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 CCDC194A0A1B0GVG4 234 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 SPATA31C2B4DYI2 1134 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 USP17L10C9JJH3 530 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 AP1G1O43747 822 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 STRNO43815 780 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 PALMO75781 387 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 URI1O94763 535 aaPredicted RBP3.74□□□□□ -1.81
SEC23A-207ENST00000554615 TGDSO95455 350 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 LSM8O95777 96 aaKnown RBP3.74□□□□□ -1.81
SEC23A-207ENST00000554615 NDUFB10O96000 172 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 RPS12P25398 132 aaKnown RBP3.74□□□□□ -1.81
SEC23A-207ENST00000554615 PSMD8P48556 350 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 TBC1D8BQ0IIM8 1120 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 BNIP1Q12981 228 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 TMEM266Q2M3C6 531 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 CBWD6Q4V339 395 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 CBWD3Q5JTY5 395 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 CBWD5Q5RIA9 395 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 NFRKBQ6P4R8 1299 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 USP17L2Q6R6M4 530 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 MAMDC4Q6UXC1 1216 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 ABHD15Q6UXT9 468 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 TIFABQ6ZNK6 161 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 TADA2BQ86TJ2 420 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 HOOK3Q86VS8 718 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 CHSY1Q86X52 802 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 TEX11Q8IYF3 940 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 ERP44Q9BS26 406 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 OSBPL7Q9BZF2 842 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 TMEM206Q9H813 350 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 PRR12Q9ULL5 1215 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 SLC45A1Q9Y2W3 748 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 PCDHAC2Q9Y5I4 1007 aa3.74□□□□□ -1.81
SEC23A-207ENST00000554615 TSPY2A6NKD2 308 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 PODXLO00592 558 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 NDC80O14777 642 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 WDR46O15213 610 aaKnown RBP3.73□□□□□ -1.81
SEC23A-207ENST00000554615 PPFIA3O75145 1194 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 WISP3O95389 354 aaPredicted RBP3.73□□□□□ -1.81
SEC23A-207ENST00000554615 MOCS3O95396 460 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 GSTA2P09210 222 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 EEF2P13639 858 aaKnown RBP3.73□□□□□ -1.81
SEC23A-207ENST00000554615 SFNP31947 248 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 AKAP17AQ02040 695 aaKnown RBP3.73□□□□□ -1.81
SEC23A-207ENST00000554615 GFPT1Q06210 699 aaPredicted RBP3.73□□□□□ -1.81
SEC23A-207ENST00000554615 MCL1Q07820 350 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 ACAP1Q15027 740 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 DIXDC1Q155Q3 683 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 CCDC122Q5T0U0 273 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 ADGRG6Q86SQ4 1221 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 CCDC117Q8IWD4 279 aaPredicted RBP3.73□□□□□ -1.81
SEC23A-207ENST00000554615 NLGN1Q8N2Q7 840 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 SUPT20HQ8NEM7 779 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 ZNF473Q8WTR7 871 aaKnown RBP3.73□□□□□ -1.81
SEC23A-207ENST00000554615 CENPIQ92674 756 aaPredicted RBP3.73□□□□□ -1.81
SEC23A-207ENST00000554615 DUS3LQ96G46 650 aaKnown RBP3.73□□□□□ -1.81
SEC23A-207ENST00000554615 CYP2S1Q96SQ9 504 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 VPS16Q9H269 839 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 ACBD3Q9H3P7 528 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 ZNF385DQ9H6B1 395 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 DHX33Q9H6R0 707 aaKnown RBP3.73□□□□□ -1.81
SEC23A-207ENST00000554615 TMEM8AQ9HCN3 771 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 ERVK-5Q9HDB9 667 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 HAUS2Q9NVX0 235 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 DNAJB4Q9UDY4 337 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 PARP2Q9UGN5 583 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 USP3Q9Y6I4 520 aa3.73□□□□□ -1.81
SEC23A-207ENST00000554615 MTCL1Q9Y4B5 1905 aaKnown RBP3.73□□□□□ -1.81
SEC23A-207ENST00000554615 SHTN1A0MZ66 631 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms