RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 MAN1C1Q9NR34 630 aa27.02■■□□□ 1.92
FOXA1-204ENST00000554607 NR1I2O75469 434 aa27.01■■□□□ 1.91
FOXA1-204ENST00000554607 NPR3P17342 541 aa27.01■■□□□ 1.91
FOXA1-204ENST00000554607 YWHABP31946 246 aaKnown RBP27.01■■□□□ 1.91
FOXA1-204ENST00000554607 OR1G1P47890 313 aa27.01■■□□□ 1.91
FOXA1-204ENST00000554607 EMC2Q15006 297 aa27.01■■□□□ 1.91
FOXA1-204ENST00000554607 FERMT3Q86UX7 667 aa27.01■■□□□ 1.91
FOXA1-204ENST00000554607 COLGALT2Q8IYK4 626 aa27.01■■□□□ 1.91
FOXA1-204ENST00000554607 CCDC51Q96ER9 411 aa27.01■■□□□ 1.91
FOXA1-204ENST00000554607 AIFM3Q96NN9 605 aa27.01■■□□□ 1.91
FOXA1-204ENST00000554607 PRG3Q9Y2Y8 225 aaPredicted RBP27.01■■□□□ 1.91
FOXA1-204ENST00000554607 FAM186AA6NE01 2351 aa27■■□□□ 1.91
FOXA1-204ENST00000554607 CCDC195A0A1B0GUA6 201 aa27■■□□□ 1.91
FOXA1-204ENST00000554607 INPPL1O15357 1258 aa27■■□□□ 1.91
FOXA1-204ENST00000554607 GLUD1P00367 558 aa27■■□□□ 1.91
FOXA1-204ENST00000554607 XBP1P17861 261 aa27■■□□□ 1.91
FOXA1-204ENST00000554607 GLUD2P49448 558 aa27■■□□□ 1.91
FOXA1-204ENST00000554607 MXD4Q14582 209 aaPredicted RBP27■■□□□ 1.91
FOXA1-204ENST00000554607 CCDC105Q8IYK2 499 aa27■■□□□ 1.91
FOXA1-204ENST00000554607 SIX5Q8N196 739 aa27■■□□□ 1.91
FOXA1-204ENST00000554607 SMG8Q8ND04 991 aaKnown RBP27■■□□□ 1.91
FOXA1-204ENST00000554607 LXNQ9BS40 222 aa27■■□□□ 1.91
FOXA1-204ENST00000554607 ZSWIM4Q9H7M6 989 aa27■■□□□ 1.91
FOXA1-204ENST00000554607 RXFP1Q9HBX9 757 aa27■■□□□ 1.91
FOXA1-204ENST00000554607 WDR6Q9NNW5 1121 aaKnown RBP27■■□□□ 1.91
FOXA1-204ENST00000554607 MARCH5Q9NX47 278 aa27■■□□□ 1.91
FOXA1-204ENST00000554607 WRAP73Q9P2S5 460 aaPredicted RBP27■■□□□ 1.91
FOXA1-204ENST00000554607 KCNJ14Q9UNX9 436 aa27■■□□□ 1.91
FOXA1-204ENST00000554607 IPPQ9Y573 584 aa27■■□□□ 1.91
FOXA1-204ENST00000554607 TEX28O15482 410 aa26.99■■□□□ 1.91
FOXA1-204ENST00000554607 PI15O43692 258 aa26.99■■□□□ 1.91
FOXA1-204ENST00000554607 CDKL5O76039 1030 aa26.99■■□□□ 1.91
FOXA1-204ENST00000554607 C1RP00736 705 aa26.99■■□□□ 1.91
FOXA1-204ENST00000554607 XKR9Q5GH70 373 aa26.99■■□□□ 1.91
FOXA1-204ENST00000554607 KIAA0319Q5VV43 1072 aa26.99■■□□□ 1.91
FOXA1-204ENST00000554607 NOTUMQ6P988 496 aa26.99■■□□□ 1.91
FOXA1-204ENST00000554607 HDAC7Q8WUI4 952 aa26.99■■□□□ 1.91
FOXA1-204ENST00000554607 NXPE3Q969Y0 559 aa26.99■■□□□ 1.91
FOXA1-204ENST00000554607 MTRQ99707 1265 aa26.99■■□□□ 1.91
FOXA1-204ENST00000554607 PHF20Q9BVI0 1012 aa26.99■■□□□ 1.91
FOXA1-204ENST00000554607 TM6SF1Q9BZW5 370 aa26.99■■□□□ 1.91
FOXA1-204ENST00000554607 WNT16Q9UBV4 365 aa26.99■■□□□ 1.91
FOXA1-204ENST00000554607 C2orf16Q68DN1 1984 aa26.98■■□□□ 1.91
FOXA1-204ENST00000554607 ARL5CA6NH57 179 aa26.98■■□□□ 1.91
FOXA1-204ENST00000554607 CCNT1O60563 726 aaKnown RBP26.98■■□□□ 1.91
FOXA1-204ENST00000554607 GBP2P32456 591 aaPredicted RBP26.98■■□□□ 1.91
FOXA1-204ENST00000554607 STK3Q13188 491 aa26.98■■□□□ 1.91
FOXA1-204ENST00000554607 TFDP1Q14186 410 aa26.98■■□□□ 1.91
FOXA1-204ENST00000554607 TAS1R1Q7RTX1 841 aa26.98■■□□□ 1.91
FOXA1-204ENST00000554607 HACE1Q8IYU2 909 aa26.98■■□□□ 1.91
FOXA1-204ENST00000554607 RNF168Q8IYW5 571 aaPredicted RBP26.98■■□□□ 1.91
FOXA1-204ENST00000554607 DTWD2Q8NBA8 298 aa26.98■■□□□ 1.91
FOXA1-204ENST00000554607 GAD1Q99259 594 aa26.98■■□□□ 1.91
FOXA1-204ENST00000554607 COLEC11Q9BWP8 271 aa26.98■■□□□ 1.91
FOXA1-204ENST00000554607 BMP2KQ9NSY1 1161 aaPredicted RBP26.98■■□□□ 1.91
FOXA1-204ENST00000554607 BAG4O95429 457 aaKnown RBP26.97■■□□□ 1.91
FOXA1-204ENST00000554607 EFEMP2O95967 443 aa26.97■■□□□ 1.91
FOXA1-204ENST00000554607 PTENP60484 403 aa26.97■■□□□ 1.91
FOXA1-204ENST00000554607 DSG1Q02413 1049 aa26.97■■□□□ 1.91
FOXA1-204ENST00000554607 POU5F1BQ06416 359 aa26.97■■□□□ 1.91
FOXA1-204ENST00000554607 DSC1Q08554 894 aa26.97■■□□□ 1.91
FOXA1-204ENST00000554607 NCAPH2Q6IBW4 605 aa26.97■■□□□ 1.91
FOXA1-204ENST00000554607 SLFN12Q8IYM2 578 aa26.97■■□□□ 1.91
FOXA1-204ENST00000554607 HAS1Q92839 578 aa26.97■■□□□ 1.91
FOXA1-204ENST00000554607 LARP6Q9BRS8 491 aaKnown RBP26.97■■□□□ 1.91
FOXA1-204ENST00000554607 RGL1Q9NZL6 768 aa26.97■■□□□ 1.91
FOXA1-204ENST00000554607 EPS15L1Q9UBC2 864 aa26.97■■□□□ 1.91
FOXA1-204ENST00000554607 CLUHO75153 1309 aa26.96■■□□□ 1.91
FOXA1-204ENST00000554607 SPTBN4Q9H254 2564 aa26.96■■□□□ 1.91
FOXA1-204ENST00000554607 STK25O00506 426 aa26.96■■□□□ 1.91
FOXA1-204ENST00000554607 TSPAN1O60635 241 aa26.96■■□□□ 1.91
FOXA1-204ENST00000554607 ANGPT1Q15389 498 aa26.96■■□□□ 1.91
FOXA1-204ENST00000554607 SMG7Q92540 1137 aaKnown RBP26.96■■□□□ 1.91
FOXA1-204ENST00000554607 DYDC2Q96IM9 177 aa26.96■■□□□ 1.91
FOXA1-204ENST00000554607 EIF2AQ9BY44 585 aaKnown RBP26.96■■□□□ 1.91
FOXA1-204ENST00000554607 TRIM6Q9C030 488 aaPredicted RBP26.96■■□□□ 1.91
FOXA1-204ENST00000554607 CSRNP2Q9H175 543 aa26.96■■□□□ 1.91
FOXA1-204ENST00000554607 PLEKHA4Q9H4M7 779 aa26.96■■□□□ 1.91
FOXA1-204ENST00000554607 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.96■■□□□ 1.91
FOXA1-204ENST00000554607 GIT1Q9Y2X7 761 aa26.96■■□□□ 1.91
FOXA1-204ENST00000554607 N4BP1O75113 896 aaKnown RBP26.95■■□□□ 1.9
FOXA1-204ENST00000554607 MLH1P40692 756 aa26.95■■□□□ 1.9
FOXA1-204ENST00000554607 CTTNQ14247 550 aaKnown RBP26.95■■□□□ 1.9
FOXA1-204ENST00000554607 PIK3AP1Q6ZUJ8 805 aa26.95■■□□□ 1.9
FOXA1-204ENST00000554607 IFNLR1Q8IU57 520 aaPredicted RBP26.95■■□□□ 1.9
FOXA1-204ENST00000554607 GPR65Q8IYL9 337 aa26.95■■□□□ 1.9
FOXA1-204ENST00000554607 ADSSL1Q8N142 457 aa26.95■■□□□ 1.9
FOXA1-204ENST00000554607 RNF39Q9H2S5 420 aa26.95■■□□□ 1.9
FOXA1-204ENST00000554607 CHST7Q9NS84 486 aa26.95■■□□□ 1.9
FOXA1-204ENST00000554607 VPS13AQ96RL7 3174 aa26.95■■□□□ 1.9
FOXA1-204ENST00000554607 INO80B-WBP1J3KQ70 363 aa26.94■■□□□ 1.9
FOXA1-204ENST00000554607 NARSO43776 548 aaKnown RBP26.94■■□□□ 1.9
FOXA1-204ENST00000554607 PAPLNO95428 1278 aa26.94■■□□□ 1.9
FOXA1-204ENST00000554607 RFX1P22670 979 aa26.94■■□□□ 1.9
FOXA1-204ENST00000554607 SCNN1GP51170 649 aa26.94■■□□□ 1.9
FOXA1-204ENST00000554607 TPH2Q8IWU9 490 aa26.94■■□□□ 1.9
FOXA1-204ENST00000554607 PIDD1Q9HB75 910 aa26.94■■□□□ 1.9
FOXA1-204ENST00000554607 PDRG1Q9NUG6 133 aa26.94■■□□□ 1.9
FOXA1-204ENST00000554607 MIOSQ9NXC5 875 aa26.94■■□□□ 1.9
FOXA1-204ENST00000554607 HES2Q9Y543 173 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms