RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 HOXB13Q92826 284 aaPredicted RBP6.65□□□□□ -1.34
CHD8-207ENST00000554384 MVB12AQ96EY5 273 aa6.65□□□□□ -1.34
CHD8-207ENST00000554384 ADAM29Q9UKF5 820 aa6.65□□□□□ -1.34
CHD8-207ENST00000554384 SIK3Q9Y2K2 1263 aa6.65□□□□□ -1.34
CHD8-207ENST00000554384 CTDP1Q9Y5B0 961 aaPredicted RBP6.65□□□□□ -1.34
CHD8-207ENST00000554384 PCDHB1Q9Y5F3 818 aa6.65□□□□□ -1.34
CHD8-207ENST00000554384 LRRC14BA6NHZ5 514 aa6.64□□□□□ -1.35
CHD8-207ENST00000554384 DAPK3O43293 454 aa6.64□□□□□ -1.35
CHD8-207ENST00000554384 NUAK1O60285 661 aa6.64□□□□□ -1.35
CHD8-207ENST00000554384 CTNND1O60716 968 aaKnown RBP6.64□□□□□ -1.35
CHD8-207ENST00000554384 ALDH1A2O94788 518 aa6.64□□□□□ -1.35
CHD8-207ENST00000554384 ALDH2P05091 517 aa6.64□□□□□ -1.35
CHD8-207ENST00000554384 SLURP1P55000 103 aa6.64□□□□□ -1.35
CHD8-207ENST00000554384 DSC2Q02487 901 aa6.64□□□□□ -1.35
CHD8-207ENST00000554384 USP10Q14694 798 aaKnown RBP6.64□□□□□ -1.35
CHD8-207ENST00000554384 LLGL1Q15334 1064 aa6.64□□□□□ -1.35
CHD8-207ENST00000554384 MAN2A1Q16706 1144 aa6.64□□□□□ -1.35
CHD8-207ENST00000554384 ZNF827Q17R98 1081 aa6.64□□□□□ -1.35
CHD8-207ENST00000554384 AGBL4Q5VU57 503 aa6.64□□□□□ -1.35
CHD8-207ENST00000554384 KSR2Q6VAB6 950 aa6.64□□□□□ -1.35
CHD8-207ENST00000554384 TAS1R1Q7RTX1 841 aa6.64□□□□□ -1.35
CHD8-207ENST00000554384 RHOT1Q8IXI2 618 aa6.64□□□□□ -1.35
CHD8-207ENST00000554384 UNC5BQ8IZJ1 945 aa6.64□□□□□ -1.35
CHD8-207ENST00000554384 LILRA3Q8N6C8 439 aaPredicted RBP6.64□□□□□ -1.35
CHD8-207ENST00000554384 PLA2G15Q8NCC3 412 aa6.64□□□□□ -1.35
CHD8-207ENST00000554384 REPS2Q8NFH8 660 aa6.64□□□□□ -1.35
CHD8-207ENST00000554384 SNX33Q8WV41 574 aa6.64□□□□□ -1.35
CHD8-207ENST00000554384 STON2Q8WXE9 905 aa6.64□□□□□ -1.35
CHD8-207ENST00000554384 CCDC136Q96JN2 1154 aa6.64□□□□□ -1.35
CHD8-207ENST00000554384 RPL10LQ96L21 214 aaKnown RBP6.64□□□□□ -1.35
CHD8-207ENST00000554384 MAP3K14Q99558 947 aa6.64□□□□□ -1.35
CHD8-207ENST00000554384 KRTAP9-8Q9BYQ0 159 aa6.64□□□□□ -1.35
CHD8-207ENST00000554384 BARX1Q9HBU1 254 aaPredicted RBP6.64□□□□□ -1.35
CHD8-207ENST00000554384 GEMIN8Q9NWZ8 242 aaKnown RBP6.64□□□□□ -1.35
CHD8-207ENST00000554384 RPTORQ8N122 1335 aa6.64□□□□□ -1.35
CHD8-207ENST00000554384 ZSCAN22P10073 491 aaPredicted RBP6.63□□□□□ -1.35
CHD8-207ENST00000554384 WASP42768 502 aa6.63□□□□□ -1.35
CHD8-207ENST00000554384 MGAT2Q10469 447 aa6.63□□□□□ -1.35
CHD8-207ENST00000554384 RNF151Q2KHN1 245 aa6.63□□□□□ -1.35
CHD8-207ENST00000554384 FRMPD2Q68DX3 1309 aaPredicted RBP6.63□□□□□ -1.35
CHD8-207ENST00000554384 DGKHQ86XP1 1220 aa6.63□□□□□ -1.35
CHD8-207ENST00000554384 COL23A1Q86Y22 540 aaPredicted RBP6.63□□□□□ -1.35
CHD8-207ENST00000554384 KLHL36Q8N4N3 616 aa6.63□□□□□ -1.35
CHD8-207ENST00000554384 LINC01356Q8N9X3 169 aa6.63□□□□□ -1.35
CHD8-207ENST00000554384 GCDHQ92947 438 aaPredicted RBP6.63□□□□□ -1.35
CHD8-207ENST00000554384 GFM2Q969S9 779 aaKnown RBP6.63□□□□□ -1.35
CHD8-207ENST00000554384 VWA7Q9Y334 891 aa6.63□□□□□ -1.35
CHD8-207ENST00000554384 B4GALT4O60513 344 aa6.62□□□□□ -1.35
CHD8-207ENST00000554384 TOX4O94842 621 aa6.62□□□□□ -1.35
CHD8-207ENST00000554384 SYN1P17600 705 aa6.62□□□□□ -1.35
CHD8-207ENST00000554384 BPIFB4P59827 614 aa6.62□□□□□ -1.35
CHD8-207ENST00000554384 CAP1Q01518 475 aa6.62□□□□□ -1.35
CHD8-207ENST00000554384 PGS1Q32NB8 556 aa6.62□□□□□ -1.35
CHD8-207ENST00000554384 OVCH2Q7RTZ1 564 aa6.62□□□□□ -1.35
CHD8-207ENST00000554384 SIAH1Q8IUQ4 282 aa6.62□□□□□ -1.35
CHD8-207ENST00000554384 REXO1L1PQ8IX06 675 aa6.62□□□□□ -1.35
CHD8-207ENST00000554384 KBTBD2Q8IY47 623 aa6.62□□□□□ -1.35
CHD8-207ENST00000554384 ANKRD53Q8N9V6 530 aa6.62□□□□□ -1.35
CHD8-207ENST00000554384 SYT8Q8NBV8 401 aa6.62□□□□□ -1.35
CHD8-207ENST00000554384 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.62□□□□□ -1.35
CHD8-207ENST00000554384 ZSCAN18Q8TBC5 510 aaPredicted RBP6.62□□□□□ -1.35
CHD8-207ENST00000554384 CCHCR1Q8TD31 782 aa6.62□□□□□ -1.35
CHD8-207ENST00000554384 HDAC10Q969S8 669 aa6.62□□□□□ -1.35
CHD8-207ENST00000554384 LCORQ96JN0 433 aaPredicted RBP6.62□□□□□ -1.35
CHD8-207ENST00000554384 C7orf25Q9BPX7 421 aa6.62□□□□□ -1.35
CHD8-207ENST00000554384 PDCD2LQ9BRP1 358 aa6.62□□□□□ -1.35
CHD8-207ENST00000554384 OR10A2Q9H208 303 aa6.62□□□□□ -1.35
CHD8-207ENST00000554384 RCAN3Q9UKA8 241 aa6.62□□□□□ -1.35
CHD8-207ENST00000554384 CCDC194A0A1B0GVG4 234 aa6.61□□□□□ -1.35
CHD8-207ENST00000554384 U2AF1L5P0DN76 240 aaPredicted RBP6.61□□□□□ -1.35
CHD8-207ENST00000554384 KIR2DL3P43628 341 aa6.61□□□□□ -1.35
CHD8-207ENST00000554384 ADCY7P51828 1080 aa6.61□□□□□ -1.35
CHD8-207ENST00000554384 U2AF1Q01081 240 aaKnown RBP eCLIP6.61□□□□□ -1.35
CHD8-207ENST00000554384 HGFACQ04756 655 aa6.61□□□□□ -1.35
CHD8-207ENST00000554384 TARDBPQ13148 414 aaKnown RBP eCLIP6.61□□□□□ -1.35
CHD8-207ENST00000554384 MST1LQ2TV78 715 aa6.61□□□□□ -1.35
CHD8-207ENST00000554384 FAM26FQ5R3K3 315 aa6.61□□□□□ -1.35
CHD8-207ENST00000554384 USP30Q70CQ3 517 aa6.61□□□□□ -1.35
CHD8-207ENST00000554384 ZGPATQ8N5A5 531 aaKnown RBP6.61□□□□□ -1.35
CHD8-207ENST00000554384 CAMKK1Q8N5S9 505 aa6.61□□□□□ -1.35
CHD8-207ENST00000554384 MARCH10Q8NA82 808 aaPredicted RBP6.61□□□□□ -1.35
CHD8-207ENST00000554384 RELTQ969Z4 430 aa6.61□□□□□ -1.35
CHD8-207ENST00000554384 DMRTA2Q96SC8 542 aa6.61□□□□□ -1.35
CHD8-207ENST00000554384 GPHA2Q96T91 129 aa6.61□□□□□ -1.35
CHD8-207ENST00000554384 LRFN3Q9BTN0 628 aa6.61□□□□□ -1.35
CHD8-207ENST00000554384 ARNT2Q9HBZ2 717 aa6.61□□□□□ -1.35
CHD8-207ENST00000554384 CHST12Q9NRB3 414 aa6.61□□□□□ -1.35
CHD8-207ENST00000554384 NCDNQ9UBB6 729 aa6.61□□□□□ -1.35
CHD8-207ENST00000554384 MROH6A6NGR9 719 aa6.6□□□□□ -1.35
CHD8-207ENST00000554384 MATN2O00339 956 aa6.6□□□□□ -1.35
CHD8-207ENST00000554384 NOBOXO60393 691 aa6.6□□□□□ -1.35
CHD8-207ENST00000554384 B4GALT3O60512 393 aa6.6□□□□□ -1.35
CHD8-207ENST00000554384 AMY1AP04745 511 aa6.6□□□□□ -1.35
CHD8-207ENST00000554384 ECHS1P30084 290 aa6.6□□□□□ -1.35
CHD8-207ENST00000554384 SREBF1P36956 1147 aa6.6□□□□□ -1.35
CHD8-207ENST00000554384 CASRP41180 1078 aa6.6□□□□□ -1.35
CHD8-207ENST00000554384 USP14P54578 494 aa6.6□□□□□ -1.35
CHD8-207ENST00000554384 SESN2P58004 480 aaPredicted RBP6.6□□□□□ -1.35
CHD8-207ENST00000554384 ADAM8P78325 824 aa6.6□□□□□ -1.35
CHD8-207ENST00000554384 SAFB2Q14151 953 aaKnown RBP eCLIP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms