RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 RNF38Q9H0F5 515 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 PNMA2Q9UL42 364 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 ASB1Q9Y576 335 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 PCDHA5Q9Y5H7 936 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 ANKRD26Q9UPS8 1709 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 COL5A2P05997 1499 aaPredicted RBP6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 USP6P35125 1406 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 EVC2Q86UK5 1308 aa6.31□□□□□ -1.4
MTHFD1-206ENST00000554353 IRS2Q9Y4H2 1338 aa6.31□□□□□ -1.4
MTHFD1-206ENST00000554353 PEAK1Q9H792 1746 aa6.31□□□□□ -1.4
MTHFD1-206ENST00000554353 GOLGA8AA7E2F4 631 aa6.31□□□□□ -1.4
MTHFD1-206ENST00000554353 GOLGA8BA8MQT2 603 aa6.31□□□□□ -1.4
MTHFD1-206ENST00000554353 GOLGA6L22H0YM25 854 aa6.31□□□□□ -1.4
MTHFD1-206ENST00000554353 APAF1O14727 1248 aa6.31□□□□□ -1.4
MTHFD1-206ENST00000554353 ALDH1L1O75891 902 aa6.31□□□□□ -1.4
MTHFD1-206ENST00000554353 ADCY1Q08828 1119 aa6.31□□□□□ -1.4
MTHFD1-206ENST00000554353 ABCB5Q2M3G0 1257 aa6.31□□□□□ -1.4
MTHFD1-206ENST00000554353 PHF19Q5T6S3 580 aa6.31□□□□□ -1.4
MTHFD1-206ENST00000554353 C20orf194Q5TEA3 1177 aa6.31□□□□□ -1.4
MTHFD1-206ENST00000554353 TOM1L2Q6ZVM7 507 aa6.31□□□□□ -1.4
MTHFD1-206ENST00000554353 PROSER1Q86XN7 944 aa6.31□□□□□ -1.4
MTHFD1-206ENST00000554353 CMIPQ8IY22 773 aa6.31□□□□□ -1.4
MTHFD1-206ENST00000554353 FBXO15Q8NCQ5 510 aaPredicted RBP6.31□□□□□ -1.4
MTHFD1-206ENST00000554353 E2F7Q96AV8 911 aa6.31□□□□□ -1.4
MTHFD1-206ENST00000554353 EVI5LQ96CN4 794 aa6.31□□□□□ -1.4
MTHFD1-206ENST00000554353 FOXRED1Q96CU9 486 aaPredicted RBP6.31□□□□□ -1.4
MTHFD1-206ENST00000554353 ZNF496Q96IT1 587 aaPredicted RBP6.31□□□□□ -1.4
MTHFD1-206ENST00000554353 C8orf48Q96LL4 319 aa6.31□□□□□ -1.4
MTHFD1-206ENST00000554353 POFUT1Q9H488 388 aa6.31□□□□□ -1.4
MTHFD1-206ENST00000554353 HSPBP1Q9NZL4 362 aa6.31□□□□□ -1.4
MTHFD1-206ENST00000554353 BTBD7Q9P203 1132 aa6.31□□□□□ -1.4
MTHFD1-206ENST00000554353 CRB1P82279 1406 aa6.31□□□□□ -1.4
MTHFD1-206ENST00000554353 AATKQ6ZMQ8 1374 aa6.31□□□□□ -1.4
MTHFD1-206ENST00000554353 ANKRD36BQ8N2N9 1353 aa6.31□□□□□ -1.4
MTHFD1-206ENST00000554353 SLIT3O75094 1523 aa6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 LRRC37A3O60309 1634 aa6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 ZNF839A8K0R7 811 aa6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 GABRDO14764 452 aa6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 WDHD1O75717 1129 aaPredicted RBP6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 MT-CO1P00395 513 aa6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 MYBL2P10244 700 aa6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 IARSP41252 1262 aaKnown RBP6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 GLRBP48167 497 aa6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 SLC6A3Q01959 620 aa6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 FOXD4Q12950 439 aaPredicted RBP6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 C4orf46Q504U0 113 aa6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 TTC38Q5R3I4 469 aa6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 PRAMEF9Q5VWM5 478 aa6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 TIGD7Q6NT04 549 aaPredicted RBP6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 KRBA2Q6ZNG9 492 aa6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 B3GNT8Q7Z7M8 397 aa6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 RTN4RL1Q86UN2 441 aaPredicted RBP6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 PHYKPLQ8IUZ5 450 aa6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 IGDCC3Q8IVU1 814 aa6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 WDR75Q8IWA0 830 aaKnown RBP6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 NGEFQ8N5V2 710 aa6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 KCNN1Q92952 543 aa6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 ZSWIM3Q96MP5 696 aa6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 MENTQ9BUN1 341 aa6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 MAF1Q9H063 256 aa6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 SEMA4AQ9H3S1 761 aa6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 INCENPQ9NQS7 918 aa6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 TCEAL9Q9UHQ7 104 aa6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 WASF3Q9UPY6 502 aa6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 LTN1O94822 1766 aa6.3□□□□□ -1.4
MTHFD1-206ENST00000554353 TTC21BQ7Z4L5 1316 aa6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 CD163L1Q9NR16 1453 aa6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 RGPD3A6NKT7 1758 aaPredicted RBP6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 RGPD4Q7Z3J3 1758 aa6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 N4BP3O15049 544 aa6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 SEMA7AO75326 666 aa6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 LIMS1P48059 325 aa6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 ERVK-21P61565 698 aa6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 KLF1Q13351 362 aaPredicted RBP6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 OS9Q13438 667 aaPredicted RBP6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 PDCD1Q15116 288 aa6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 TTF1Q15361 905 aaPredicted RBP6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 SKIDA1Q1XH10 827 aa6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 LRSAM1Q6UWE0 723 aa6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 ESPNLQ6ZVH7 1005 aa6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 MON2Q7Z3U7 1717 aa6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 MORC1Q86VD1 984 aa6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 ARHGEF25Q86VW2 580 aa6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 WDR48Q8TAF3 677 aa6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 IGDCC4Q8TDY8 1250 aa6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 TGFBRAP1Q8WUH2 860 aa6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 FERMT2Q96AC1 680 aa6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 RPS6KC1Q96S38 1066 aa6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 MYL10Q9BUA6 226 aa6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 ANO3Q9BYT9 981 aa6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 GEMIN8Q9NWZ8 242 aaKnown RBP6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 USP36Q9P275 1121 aaKnown RBP6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 ARHGAP20Q9P2F6 1191 aa6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 KCNG1Q9UIX4 513 aa6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 COMMD10Q9Y6G5 202 aa6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 NSD2O96028 1365 aa6.29□□□□□ -1.4
MTHFD1-206ENST00000554353 WDR17Q8IZU2 1322 aa6.28□□□□□ -1.4
MTHFD1-206ENST00000554353 CEP350Q5VT06 3117 aa6.28□□□□□ -1.4
MTHFD1-206ENST00000554353 OVOS2A0A0G2JMS6 1433 aa6.28□□□□□ -1.4
MTHFD1-206ENST00000554353 OVOS2A0A0J9YW53 1432 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms