RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 KCNQ1P51787 676 aa14.41□□□□□ -0.1
SHMT2-211ENST00000554310 BCAR1P56945 870 aa14.41□□□□□ -0.1
SHMT2-211ENST00000554310 HYAL1Q12794 435 aa14.41□□□□□ -0.1
SHMT2-211ENST00000554310 PRPF4BQ13523 1007 aaKnown RBP14.41□□□□□ -0.1
SHMT2-211ENST00000554310 PTPAQ15257 358 aa14.41□□□□□ -0.1
SHMT2-211ENST00000554310 LEXMQ3ZCV2 418 aa14.41□□□□□ -0.1
SHMT2-211ENST00000554310 RINT1Q6NUQ1 792 aa14.41□□□□□ -0.1
SHMT2-211ENST00000554310 C1orf186Q6ZWK4 172 aa14.41□□□□□ -0.1
SHMT2-211ENST00000554310 DAW1Q8N136 415 aa14.41□□□□□ -0.1
SHMT2-211ENST00000554310 ADAMTS19Q8TE59 1207 aa14.41□□□□□ -0.1
SHMT2-211ENST00000554310 KIFC3Q9BVG8 833 aa14.41□□□□□ -0.1
SHMT2-211ENST00000554310 MORC2Q9Y6X9 1032 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-211ENST00000554310 FSCN2O14926 492 aa14.4□□□□□ -0.1
SHMT2-211ENST00000554310 NPTXRO95502 500 aa14.4□□□□□ -0.1
SHMT2-211ENST00000554310 SSBP05455 408 aaKnown RBP eCLIP14.4□□□□□ -0.1
SHMT2-211ENST00000554310 MAPK7Q13164 816 aa14.4□□□□□ -0.1
SHMT2-211ENST00000554310 TMEM132AQ24JP5 1023 aa14.4□□□□□ -0.1
SHMT2-211ENST00000554310 SYT2Q8N9I0 419 aaPredicted RBP14.4□□□□□ -0.1
SHMT2-211ENST00000554310 RASSF8Q8NHQ8 419 aa14.4□□□□□ -0.1
SHMT2-211ENST00000554310 TMEM169Q96HH4 297 aa14.4□□□□□ -0.1
SHMT2-211ENST00000554310 TMEM175Q9BSA9 504 aa14.4□□□□□ -0.1
SHMT2-211ENST00000554310 NXF3Q9H4D5 531 aaKnown RBP14.4□□□□□ -0.1
SHMT2-211ENST00000554310 PDZD7Q9H5P4 517 aa14.4□□□□□ -0.1
SHMT2-211ENST00000554310 NRDE2Q9H7Z3 1164 aa14.4□□□□□ -0.1
SHMT2-211ENST00000554310 ENTPD7Q9NQZ7 604 aa14.4□□□□□ -0.1
SHMT2-211ENST00000554310 CLDND1Q9NY35 253 aa14.4□□□□□ -0.1
SHMT2-211ENST00000554310 GIT1Q9Y2X7 761 aa14.4□□□□□ -0.1
SHMT2-211ENST00000554310 HES2Q9Y543 173 aa14.4□□□□□ -0.1
SHMT2-211ENST00000554310 CLIC4Q9Y696 253 aa14.4□□□□□ -0.1
SHMT2-211ENST00000554310 ARL5CA6NH57 179 aa14.39□□□□□ -0.11
SHMT2-211ENST00000554310 PLA2G4BP0C869 781 aa14.39□□□□□ -0.11
SHMT2-211ENST00000554310 BMP1P13497 986 aa14.39□□□□□ -0.11
SHMT2-211ENST00000554310 LIG1P18858 919 aa14.39□□□□□ -0.11
SHMT2-211ENST00000554310 MCM4P33991 863 aa14.39□□□□□ -0.11
SHMT2-211ENST00000554310 MLH1P40692 756 aa14.39□□□□□ -0.11
SHMT2-211ENST00000554310 NPTX2P47972 431 aa14.39□□□□□ -0.11
SHMT2-211ENST00000554310 SLC12A3P55017 1021 aa14.39□□□□□ -0.11
SHMT2-211ENST00000554310 PEX3P56589 373 aa14.39□□□□□ -0.11
SHMT2-211ENST00000554310 GRIN1Q05586 938 aa14.39□□□□□ -0.11
SHMT2-211ENST00000554310 CTC1Q2NKJ3 1217 aa14.39□□□□□ -0.11
SHMT2-211ENST00000554310 PUS10Q3MIT2 529 aaKnown RBP14.39□□□□□ -0.11
SHMT2-211ENST00000554310 APBB1IPQ7Z5R6 666 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-211ENST00000554310 ADGRD2Q7Z7M1 963 aa14.39□□□□□ -0.11
SHMT2-211ENST00000554310 CDR2LQ86X02 465 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-211ENST00000554310 EFHBQ8N7U6 833 aa14.39□□□□□ -0.11
SHMT2-211ENST00000554310 MICAL1Q8TDZ2 1067 aa14.39□□□□□ -0.11
SHMT2-211ENST00000554310 GAD1Q99259 594 aa14.39□□□□□ -0.11
SHMT2-211ENST00000554310 PLIN2Q99541 437 aa14.39□□□□□ -0.11
SHMT2-211ENST00000554310 CDCA3Q99618 268 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-211ENST00000554310 TCF25Q9BQ70 676 aa14.39□□□□□ -0.11
SHMT2-211ENST00000554310 ADPGKQ9BRR6 497 aa14.39□□□□□ -0.11
SHMT2-211ENST00000554310 APOL6Q9BWW8 343 aa14.39□□□□□ -0.11
SHMT2-211ENST00000554310 NGRNQ9NPE2 291 aaKnown RBP14.39□□□□□ -0.11
SHMT2-211ENST00000554310 ARHGAP28Q9P2N2 729 aa14.39□□□□□ -0.11
SHMT2-211ENST00000554310 STK39Q9UEW8 545 aa14.39□□□□□ -0.11
SHMT2-211ENST00000554310 KCNG1Q9UIX4 513 aa14.39□□□□□ -0.11
SHMT2-211ENST00000554310 TCF20Q9UGU0 1960 aaKnown RBP14.39□□□□□ -0.11
SHMT2-211ENST00000554310 CCDC169A6NNP5 214 aa14.38□□□□□ -0.11
SHMT2-211ENST00000554310 K7ERI5 159 aa14.38□□□□□ -0.11
SHMT2-211ENST00000554310 GALTP07902 379 aa14.38□□□□□ -0.11
SHMT2-211ENST00000554310 PLCG1P19174 1290 aa14.38□□□□□ -0.11
SHMT2-211ENST00000554310 NRIP1P48552 1158 aa14.38□□□□□ -0.11
SHMT2-211ENST00000554310 SLC11A1P49279 550 aa14.38□□□□□ -0.11
SHMT2-211ENST00000554310 ERVFC1P60507 584 aa14.38□□□□□ -0.11
SHMT2-211ENST00000554310 NUCB2P80303 420 aa14.38□□□□□ -0.11
SHMT2-211ENST00000554310 DCAF4L1Q3SXM0 396 aa14.38□□□□□ -0.11
SHMT2-211ENST00000554310 FAM173BQ6P4H8 233 aa14.38□□□□□ -0.11
SHMT2-211ENST00000554310 CLEC17AQ6ZS10 378 aa14.38□□□□□ -0.11
SHMT2-211ENST00000554310 EP400NLQ6ZTU2 488 aa14.38□□□□□ -0.11
SHMT2-211ENST00000554310 ZNF280BQ86YH2 543 aa14.38□□□□□ -0.11
SHMT2-211ENST00000554310 SPIRE2Q8WWL2 714 aa14.38□□□□□ -0.11
SHMT2-211ENST00000554310 IGSF21Q96ID5 467 aa14.38□□□□□ -0.11
SHMT2-211ENST00000554310 FAM193BQ96PV7 902 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-211ENST00000554310 USP28Q96RU2 1077 aa14.38□□□□□ -0.11
SHMT2-211ENST00000554310 UHRF1Q96T88 793 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-211ENST00000554310 CCSER1Q9C0I3 900 aa14.38□□□□□ -0.11
SHMT2-211ENST00000554310 GBP3Q9H0R5 595 aa14.38□□□□□ -0.11
SHMT2-211ENST00000554310 RNF39Q9H2S5 420 aa14.38□□□□□ -0.11
SHMT2-211ENST00000554310 TMEM134Q9H6X4 195 aa14.38□□□□□ -0.11
SHMT2-211ENST00000554310 POLD4Q9HCU8 107 aa14.38□□□□□ -0.11
SHMT2-211ENST00000554310 KMT5AQ9NQR1 393 aa14.38□□□□□ -0.11
SHMT2-211ENST00000554310 DNAJB4Q9UDY4 337 aa14.38□□□□□ -0.11
SHMT2-211ENST00000554310 FBXO2Q9UK22 296 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-211ENST00000554310 ODF2LQ9ULJ1 636 aa14.38□□□□□ -0.11
SHMT2-211ENST00000554310 PCDHGC5Q9Y5F6 944 aa14.38□□□□□ -0.11
SHMT2-211ENST00000554310 SRPRBQ9Y5M8 271 aaKnown RBP14.38□□□□□ -0.11
SHMT2-211ENST00000554310 TTLL13PA6NNM8 815 aa14.37□□□□□ -0.11
SHMT2-211ENST00000554310 NT5C1B-RDH14C9J2C7 533 aa14.37□□□□□ -0.11
SHMT2-211ENST00000554310 H3BQ06 376 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-211ENST00000554310 B4GALT3O60512 393 aa14.37□□□□□ -0.11
SHMT2-211ENST00000554310 TBX10O75333 385 aa14.37□□□□□ -0.11
SHMT2-211ENST00000554310 POMCP01189 267 aa14.37□□□□□ -0.11
SHMT2-211ENST00000554310 EDN1P05305 212 aa14.37□□□□□ -0.11
SHMT2-211ENST00000554310 PLS3P13797 630 aa14.37□□□□□ -0.11
SHMT2-211ENST00000554310 PTMSP20962 102 aa14.37□□□□□ -0.11
SHMT2-211ENST00000554310 MARCKSP29966 332 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-211ENST00000554310 GTF2F1P35269 517 aaKnown RBP eCLIP14.37□□□□□ -0.11
SHMT2-211ENST00000554310 TXLNAP40222 546 aa14.37□□□□□ -0.11
SHMT2-211ENST00000554310 NASPP49321 788 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-211ENST00000554310 SCNN1GP51170 649 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms