RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 PA2G4Q9UQ80 394 aaKnown RBP6.65□□□□□ -1.34
VPS33B-203ENST00000554264 ZMYM6O95789 1325 aa6.65□□□□□ -1.35
VPS33B-203ENST00000554264 STK36Q9NRP7 1315 aa6.65□□□□□ -1.35
VPS33B-203ENST00000554264 E7EWF7 191 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 CPLX1O14810 134 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 STX10O60499 249 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 CUTAO60888 179 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 SMC2O95347 1197 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 SGPL1O95470 568 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 CDK11BP21127 795 aaKnown RBP6.64□□□□□ -1.35
VPS33B-203ENST00000554264 MCM3P25205 808 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 CTGFP29279 349 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 PDIA3P30101 505 aaKnown RBP6.64□□□□□ -1.35
VPS33B-203ENST00000554264 FOXO4P98177 505 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 PRKCZQ05513 592 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 TRDNQ13061 729 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 TRIM29Q14134 588 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 SLC39A14Q15043 492 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 TTF1Q15361 905 aaPredicted RBP6.64□□□□□ -1.35
VPS33B-203ENST00000554264 MUM1L1Q5H9M0 696 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 ANO1Q5XXA6 986 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 FBXO38Q6PIJ6 1188 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 UNC5AQ6ZN44 842 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 TMC6Q7Z403 805 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 RALYLQ86SE5 291 aaKnown RBP6.64□□□□□ -1.35
VPS33B-203ENST00000554264 VPS37DQ86XT2 251 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 HOMER1Q86YM7 354 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 FAM169BQ8N8A8 192 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 MLKLQ8NB16 471 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 NCOA7Q8NI08 942 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 PIWIL2Q8TC59 973 aaKnown RBP6.64□□□□□ -1.35
VPS33B-203ENST00000554264 ASB11Q8WXH4 323 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 SLC6A18Q96N87 628 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 PYM1Q9BRP8 204 aaKnown RBP6.64□□□□□ -1.35
VPS33B-203ENST00000554264 MRIQ9BWK5 157 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.64□□□□□ -1.35
VPS33B-203ENST00000554264 GBP3Q9H0R5 595 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 TMX1Q9H3N1 280 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 PRDM7Q9NQW5 492 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 ADGRE2Q9UHX3 823 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 PCDHA7Q9UN72 937 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 MAST3O60307 1309 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 ADGRA2Q96PE1 1338 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 NID2Q14112 1375 aa6.64□□□□□ -1.35
VPS33B-203ENST00000554264 C9IYK1 514 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 CEP290O15078 2479 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 ERLIN1O75477 346 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 EIF3JO75822 258 aaKnown RBP6.63□□□□□ -1.35
VPS33B-203ENST00000554264 ZNF202O95125 648 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 BMP15O95972 392 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 TFRCP02786 760 aaKnown RBP6.63□□□□□ -1.35
VPS33B-203ENST00000554264 HSPD1P10809 573 aaKnown RBP6.63□□□□□ -1.35
VPS33B-203ENST00000554264 TOP1P11387 765 aaKnown RBP6.63□□□□□ -1.35
VPS33B-203ENST00000554264 FUT4P22083 530 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 GUCY2CP25092 1073 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 CYP2C19P33261 490 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 BMP8BP34820 402 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 CCNFP41002 786 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 SYKP43405 635 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 GYG1P46976 350 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 TFCP2Q12800 502 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 BRD3Q15059 726 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 PPP2R5BQ15173 497 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 ELF2Q15723 593 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 CAVIN4Q5BKX8 364 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 E4F1Q66K89 784 aaPredicted RBP6.63□□□□□ -1.35
VPS33B-203ENST00000554264 FAM173BQ6P4H8 233 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 CTR9Q6PD62 1173 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 LMBR1LQ6UX01 489 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 VSTM4Q8IW00 320 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 TAB3Q8N5C8 712 aaPredicted RBP6.63□□□□□ -1.35
VPS33B-203ENST00000554264 ARAP2Q8WZ64 1704 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 RABGGTAQ92696 567 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 CCDC51Q96ER9 411 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 FAM84BQ96KN1 310 aaPredicted RBP6.63□□□□□ -1.35
VPS33B-203ENST00000554264 ZDHHC15Q96MV8 337 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 CTAGE1Q96RT6 745 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 TM9SF2Q99805 663 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 ASPNQ9BXN1 380 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 GPR62Q9BZJ7 368 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 XPO4Q9C0E2 1151 aaKnown RBP6.63□□□□□ -1.35
VPS33B-203ENST00000554264 GOLPH3LQ9H4A5 285 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 MBNL3Q9NUK0 354 aaKnown RBP6.63□□□□□ -1.35
VPS33B-203ENST00000554264 MYO1AQ9UBC5 1043 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 SUGT1Q9Y2Z0 365 aa6.63□□□□□ -1.35
VPS33B-203ENST00000554264 MROH5Q6ZUA9 1318 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 CCDC151A5D8V7 595 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 EYA2O00167 538 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 CXCL11O14625 94 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 ADCY3O60266 1144 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 ZRANB2O95218 330 aaKnown RBP eCLIP6.62□□□□□ -1.35
VPS33B-203ENST00000554264 CTDNEP1O95476 244 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 SERPINC1P01008 464 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 ESR1P03372 595 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 IVLP07476 585 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 IFIT1P09914 478 aaKnown RBP6.62□□□□□ -1.35
VPS33B-203ENST00000554264 NT5C2P49902 561 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 CACNB3P54284 484 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 UBASH3AP57075 661 aa6.62□□□□□ -1.35
VPS33B-203ENST00000554264 IKZF1Q13422 519 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms