RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 PYM1Q9BRP8 204 aaKnown RBP10.21□□□□□ -0.78
SIX4-202ENST00000554079 PACSIN1Q9BY11 444 aa10.21□□□□□ -0.78
SIX4-202ENST00000554079 ROPN1BQ9BZX4 212 aaPredicted RBP10.21□□□□□ -0.78
SIX4-202ENST00000554079 GBA3Q9H227 469 aa10.21□□□□□ -0.78
SIX4-202ENST00000554079 ROPN1Q9HAT0 212 aaPredicted RBP10.21□□□□□ -0.78
SIX4-202ENST00000554079 LY9Q9HBG7 655 aa10.21□□□□□ -0.78
SIX4-202ENST00000554079 TCP11L1Q9NUJ3 509 aa10.21□□□□□ -0.78
SIX4-202ENST00000554079 STX8Q9UNK0 236 aa10.21□□□□□ -0.78
SIX4-202ENST00000554079 CTDP1Q9Y5B0 961 aaPredicted RBP10.21□□□□□ -0.78
SIX4-202ENST00000554079 TMEM2Q9UHN6 1383 aa10.21□□□□□ -0.78
SIX4-202ENST00000554079 PFASO15067 1338 aa10.2□□□□□ -0.78
SIX4-202ENST00000554079 TIAM2Q8IVF5 1701 aa10.2□□□□□ -0.78
SIX4-202ENST00000554079 GSC2O15499 205 aa10.2□□□□□ -0.78
SIX4-202ENST00000554079 TLR2O60603 784 aa10.2□□□□□ -0.78
SIX4-202ENST00000554079 ZNF394Q53GI3 561 aa10.2□□□□□ -0.78
SIX4-202ENST00000554079 TMTC3Q6ZXV5 915 aa10.2□□□□□ -0.78
SIX4-202ENST00000554079 OTUD6AQ7L8S5 288 aa10.2□□□□□ -0.78
SIX4-202ENST00000554079 DZIP1Q86YF9 867 aaKnown RBP10.2□□□□□ -0.78
SIX4-202ENST00000554079 GIMAP8Q8ND71 665 aaPredicted RBP10.2□□□□□ -0.78
SIX4-202ENST00000554079 FBXO25Q8TCJ0 367 aa10.2□□□□□ -0.78
SIX4-202ENST00000554079 P2RX5Q93086 422 aa10.2□□□□□ -0.78
SIX4-202ENST00000554079 ZMAT2Q96NC0 199 aaKnown RBP10.2□□□□□ -0.78
SIX4-202ENST00000554079 EYA1Q99502 592 aa10.2□□□□□ -0.78
SIX4-202ENST00000554079 ERP44Q9BS26 406 aa10.2□□□□□ -0.78
SIX4-202ENST00000554079 PITPNM3Q9BZ71 974 aa10.2□□□□□ -0.78
SIX4-202ENST00000554079 GOLPH3Q9H4A6 298 aa10.2□□□□□ -0.78
SIX4-202ENST00000554079 GRHL1Q9NZI5 618 aa10.2□□□□□ -0.78
SIX4-202ENST00000554079 RABL2BQ9UNT1 228 aa10.2□□□□□ -0.78
SIX4-202ENST00000554079 TSC22D4Q9Y3Q8 395 aa10.2□□□□□ -0.78
SIX4-202ENST00000554079 NUMBLQ9Y6R0 609 aa10.2□□□□□ -0.78
SIX4-202ENST00000554079 A0A1B0GUL6 1792 aa10.2□□□□□ -0.78
SIX4-202ENST00000554079 NBPF26B4DH59 902 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 KIAA0391O15091 583 aaKnown RBP10.19□□□□□ -0.78
SIX4-202ENST00000554079 MAGEB2O15479 319 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 BUD23O43709 281 aaKnown RBP10.19□□□□□ -0.78
SIX4-202ENST00000554079 ADCY3O60266 1144 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 STK10O94804 968 aaKnown RBP10.19□□□□□ -0.78
SIX4-202ENST00000554079 RHOBTB3O94955 611 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 BMP15O95972 392 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 ANPEPP15144 967 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 CCNE1P24864 410 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 PCSK6P29122 969 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 STX2P32856 288 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 PTENP60484 403 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 ZNF568Q3ZCX4 644 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 TAF1BQ53T94 588 aaPredicted RBP10.19□□□□□ -0.78
SIX4-202ENST00000554079 TDRD12Q587J7 1177 aaKnown RBP10.19□□□□□ -0.78
SIX4-202ENST00000554079 ANKRD40Q6AI12 368 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 TBC1D10CQ8IV04 446 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 CROCCP3Q8IVE0 287 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 CCDC82Q8N4S0 544 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 IGDCC4Q8TDY8 1250 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 STMN2Q93045 179 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 VPS50Q96JG6 964 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 PHF12Q96QT6 1004 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 CCT7Q99832 543 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 HEPHQ9BQS7 1158 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 BTBD10Q9BSF8 475 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 EDEM3Q9BZQ6 932 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 TRPC7Q9HCX4 862 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 FAM187AA6NFU0 413 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 ZNF213O14771 459 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 DGKIO75912 1065 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 SERPING1P05155 500 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 VDRP11473 427 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 FGFR4P22455 802 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 DRG2P55039 364 aaKnown RBP10.19□□□□□ -0.78
SIX4-202ENST00000554079 PLTPP55058 493 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 ATP2C1P98194 919 aaPredicted RBP10.19□□□□□ -0.78
SIX4-202ENST00000554079 SLC18A3Q16572 532 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 PROSER3Q2NL68 480 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 SFR1Q86XK3 245 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 METTL25Q8N6Q8 603 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 PTCD3Q96EY7 689 aaKnown RBP10.19□□□□□ -0.78
SIX4-202ENST00000554079 EEF2KMTQ96G04 330 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 TMEM87BQ96K49 555 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 DRC3Q9H069 523 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 ATAD3AQ9NVI7 634 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 QPCTLQ9NXS2 382 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 GIT1Q9Y2X7 761 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 NR2E1Q9Y466 385 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 NOX1Q9Y5S8 564 aa10.19□□□□□ -0.78
SIX4-202ENST00000554079 C1orf167Q5SNV9 1468 aa10.18□□□□□ -0.78
SIX4-202ENST00000554079 FLT4P35916 1363 aa10.18□□□□□ -0.78
SIX4-202ENST00000554079 A8MXQ7 604 aa10.18□□□□□ -0.78
SIX4-202ENST00000554079 WASLO00401 505 aaPredicted RBP10.18□□□□□ -0.78
SIX4-202ENST00000554079 TIMM44O43615 452 aa10.18□□□□□ -0.78
SIX4-202ENST00000554079 PGM3O95394 542 aa10.18□□□□□ -0.78
SIX4-202ENST00000554079 TFAP2AP05549 437 aa10.18□□□□□ -0.78
SIX4-202ENST00000554079 AMPD1P23109 780 aa10.18□□□□□ -0.78
SIX4-202ENST00000554079 LTKP29376 864 aa10.18□□□□□ -0.78
SIX4-202ENST00000554079 SLC5A2P31639 672 aa10.18□□□□□ -0.78
SIX4-202ENST00000554079 POLR2FP61218 127 aaKnown RBP10.18□□□□□ -0.78
SIX4-202ENST00000554079 STRN3Q13033 797 aa10.18□□□□□ -0.78
SIX4-202ENST00000554079 MSLNQ13421 630 aaPredicted RBP10.18□□□□□ -0.78
SIX4-202ENST00000554079 SLC45A4Q5BKX6 768 aa10.18□□□□□ -0.78
SIX4-202ENST00000554079 TMEM214Q6NUQ4 689 aaKnown RBP10.18□□□□□ -0.78
SIX4-202ENST00000554079 PDSS2Q86YH6 399 aa10.18□□□□□ -0.78
SIX4-202ENST00000554079 ARHGAP24Q8N264 748 aa10.18□□□□□ -0.78
SIX4-202ENST00000554079 STARD8Q92502 1023 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms