RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 RAD51AP2Q09MP3 1159 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 NAA30Q147X3 362 aaPredicted RBP6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 TMEM132BQ14DG7 1078 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 PPP2R5AQ15172 486 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 SPA17Q15506 151 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 WHAMMP3Q1A5X7 153 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 ERCC6LQ2NKX8 1250 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 KLHDC7AQ5VTJ3 777 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 SFMBT2Q5VUG0 894 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 ARHGEF16Q5VV41 709 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 SLC30A10Q6XR72 485 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 RRAGAQ7L523 313 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 TRAPPC11Q7Z392 1133 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 CACNA2D4Q7Z3S7 1137 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 SRGAP1Q7Z6B7 1085 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 CD163Q86VB7 1156 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 SLC35F6Q8N357 371 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 MNS1Q8NEH6 495 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 ATRIPQ8WXE1 791 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 UBXN4Q92575 508 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 RABGGTAQ92696 567 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 SLC35C1Q96A29 364 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 VTI1AQ96AJ9 217 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 HVCN1Q96D96 273 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 NAPGQ99747 312 aaPredicted RBP6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 CARD6Q9BX69 1037 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 MOV10L1Q9BXT6 1211 aaKnown RBP6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 TEX13BQ9BXU2 312 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 GBP3Q9H0R5 595 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 KDM4CQ9H3R0 1056 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 ZHX3Q9H4I2 956 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 TMEM206Q9H813 350 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 ACAD9Q9H845 621 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 SPON1Q9HCB6 807 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 CYLDQ9NQC7 956 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 PDLIM7Q9NR12 457 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 FAM207AQ9NSI2 230 aaPredicted RBP6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 FAM53CQ9NYF3 392 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 CYP39A1Q9NYL5 469 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 PCDHA13Q9Y5I0 950 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 PCDHA10Q9Y5I2 948 aa6.58□□□□□ -1.36
VIPAS39-204ENST00000553576 SIP14410 1827 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 PFASO15067 1338 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 BTNL10A8MVZ5 291 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 SPATA31C2B4DYI2 1134 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 CXCL11O14625 94 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 P4HA2O15460 535 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 CHMP2AO43633 222 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 PPP1R12BO60237 982 aaPredicted RBP6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 TLR2O60603 784 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 GFPT2O94808 682 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 STBD1O95210 358 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 MYCLP12524 364 aaPredicted RBP6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 KCNA2P16389 499 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 HOXB4P17483 251 aaPredicted RBP6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 EIF2AK2P19525 551 aaKnown RBP6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 PON1P27169 355 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 YWHABP31946 246 aaKnown RBP6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 ABCD1P33897 745 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 EIF4A3P38919 411 aaKnown RBP6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 KIF11P52732 1056 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 NCKAP1LP55160 1127 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 PPATQ06203 517 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 KCNA1Q09470 495 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 POU4F2Q12837 409 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 KIF5AQ12840 1032 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 DGKZQ13574 1117 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 NR6A1Q15406 480 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 EXOC3L4Q17RC7 722 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 SLC9C1Q4G0N8 1177 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 ODR4Q5SWX8 454 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 CCDC122Q5T0U0 273 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 SNRNP48Q6IEG0 339 aaKnown RBP6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 NSMFQ6X4W1 530 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 LINC00114Q6XXX2 140 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 GBP6Q6ZN66 633 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 OTUD6AQ7L8S5 288 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 HS2ST1Q7LGA3 356 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 IRF2BP2Q7Z5L9 587 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 KIAA1328Q86T90 577 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 RIOX2Q8IUF8 465 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 FMNL3Q8IVF7 1028 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 PROCA1Q8NCQ7 364 aaPredicted RBP6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 BANK1Q8NDB2 785 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 SMCR8Q8TEV9 937 aaPredicted RBP6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 JAKMIP2Q96AA8 810 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 WNK4Q96J92 1243 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 DRC1Q96MC2 740 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 ACCSQ96QU6 501 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 CCDC94Q9BW85 323 aaPredicted RBP6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 LSM14BQ9BX40 385 aaKnown RBP6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 LACRTQ9GZZ8 138 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 BCAS3Q9H6U6 928 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 GPBP1L1Q9HC44 474 aaPredicted RBP6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 AGPAT3Q9NRZ7 376 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 GGA3Q9NZ52 723 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 FBXO40Q9UH90 709 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 GUCA1BQ9UMX6 200 aa6.57□□□□□ -1.36
VIPAS39-204ENST00000553576 JRKLQ9Y4A0 524 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms