RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 ADGRE1Q14246 886 aa25.1■■□□□ 1.61
TDP1-206ENST00000553569 NT5DC1Q5TFE4 455 aa25.1■■□□□ 1.61
TDP1-206ENST00000553569 ATF7IP2Q5U623 682 aa25.1■■□□□ 1.61
TDP1-206ENST00000553569 EEF1DP3Q658K8 133 aa25.1■■□□□ 1.61
TDP1-206ENST00000553569 GLB1LQ6UWU2 654 aa25.1■■□□□ 1.61
TDP1-206ENST00000553569 AGMOQ6ZNB7 445 aa25.1■■□□□ 1.61
TDP1-206ENST00000553569 MRPL10Q7Z7H8 261 aaKnown RBP25.1■■□□□ 1.61
TDP1-206ENST00000553569 LRRC43Q8N309 656 aa25.1■■□□□ 1.61
TDP1-206ENST00000553569 TMEM161BQ8NDZ6 487 aa25.1■■□□□ 1.61
TDP1-206ENST00000553569 CLP1Q92989 425 aaKnown RBP25.1■■□□□ 1.61
TDP1-206ENST00000553569 CUEDC2Q9H467 287 aa25.1■■□□□ 1.61
TDP1-206ENST00000553569 KCNG1Q9UIX4 513 aa25.1■■□□□ 1.61
TDP1-206ENST00000553569 CIZ1Q9ULV3 898 aaPredicted RBP25.1■■□□□ 1.61
TDP1-206ENST00000553569 RWDD3Q9Y3V2 267 aa25.1■■□□□ 1.61
TDP1-206ENST00000553569 CDH23Q9H251 3354 aa25.1■■□□□ 1.61
TDP1-206ENST00000553569 MAPTP10636 758 aaKnown RBP25.09■■□□□ 1.61
TDP1-206ENST00000553569 ITGA4P13612 1032 aa25.09■■□□□ 1.61
TDP1-206ENST00000553569 NCKAP1LP55160 1127 aa25.09■■□□□ 1.61
TDP1-206ENST00000553569 STRN3Q13033 797 aa25.09■■□□□ 1.61
TDP1-206ENST00000553569 ADALQ6DHV7 355 aa25.09■■□□□ 1.61
TDP1-206ENST00000553569 CNNM3Q8NE01 707 aa25.09■■□□□ 1.61
TDP1-206ENST00000553569 ADPGKQ9BRR6 497 aa25.09■■□□□ 1.61
TDP1-206ENST00000553569 NTPCRQ9BSD7 190 aaKnown RBP25.09■■□□□ 1.61
TDP1-206ENST00000553569 MRPL4Q9BYD3 311 aaKnown RBP25.09■■□□□ 1.61
TDP1-206ENST00000553569 RSAD1Q9HA92 442 aa25.09■■□□□ 1.61
TDP1-206ENST00000553569 TYW1Q9NV66 732 aaKnown RBP25.09■■□□□ 1.61
TDP1-206ENST00000553569 KCNH3Q9ULD8 1083 aa25.09■■□□□ 1.61
TDP1-206ENST00000553569 STXBP5LQ9Y2K9 1186 aa25.09■■□□□ 1.61
TDP1-206ENST00000553569 CHD7Q9P2D1 2997 aa25.08■■□□□ 1.61
TDP1-206ENST00000553569 A0A1B0GVL5 298 aa25.08■■□□□ 1.61
TDP1-206ENST00000553569 H0YCG3 227 aa25.08■■□□□ 1.61
TDP1-206ENST00000553569 TRAK2O60296 914 aa25.08■■□□□ 1.61
TDP1-206ENST00000553569 IDEP14735 1019 aa25.08■■□□□ 1.61
TDP1-206ENST00000553569 PFKFB1P16118 471 aa25.08■■□□□ 1.61
TDP1-206ENST00000553569 BMPR1AP36894 532 aa25.08■■□□□ 1.61
TDP1-206ENST00000553569 HAUS6Q7Z4H7 955 aa25.08■■□□□ 1.61
TDP1-206ENST00000553569 SFR1Q86XK3 245 aa25.08■■□□□ 1.61
TDP1-206ENST00000553569 FAM178BQ8IXR5 827 aa25.08■■□□□ 1.61
TDP1-206ENST00000553569 HACE1Q8IYU2 909 aa25.08■■□□□ 1.61
TDP1-206ENST00000553569 DNAJC19Q96DA6 116 aa25.08■■□□□ 1.61
TDP1-206ENST00000553569 TARS2Q9BW92 718 aaKnown RBP25.08■■□□□ 1.61
TDP1-206ENST00000553569 RNF39Q9H2S5 420 aa25.08■■□□□ 1.61
TDP1-206ENST00000553569 TNMDQ9H2S6 317 aa25.08■■□□□ 1.61
TDP1-206ENST00000553569 OFD1O75665 1012 aa25.07■■□□□ 1.6
TDP1-206ENST00000553569 CMA1P23946 247 aa25.07■■□□□ 1.6
TDP1-206ENST00000553569 GPM6BQ13491 265 aa25.07■■□□□ 1.6
TDP1-206ENST00000553569 NOMO2Q5JPE7 1267 aa25.07■■□□□ 1.6
TDP1-206ENST00000553569 LRRC55Q6ZSA7 311 aa25.07■■□□□ 1.6
TDP1-206ENST00000553569 MRPL9Q9BYD2 267 aaKnown RBP25.07■■□□□ 1.6
TDP1-206ENST00000553569 CWH43Q9H720 699 aa25.07■■□□□ 1.6
TDP1-206ENST00000553569 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.06■■□□□ 1.6
TDP1-206ENST00000553569 LPXNO60711 386 aa25.06■■□□□ 1.6
TDP1-206ENST00000553569 SLC34A2O95436 690 aa25.06■■□□□ 1.6
TDP1-206ENST00000553569 AKAP5P24588 427 aa25.06■■□□□ 1.6
TDP1-206ENST00000553569 NMT1P30419 496 aaKnown RBP25.06■■□□□ 1.6
TDP1-206ENST00000553569 MICALL1Q8N3F8 863 aa25.06■■□□□ 1.6
TDP1-206ENST00000553569 URGCPQ8TCY9 931 aa25.06■■□□□ 1.6
TDP1-206ENST00000553569 ACO2Q99798 780 aaKnown RBP25.06■■□□□ 1.6
TDP1-206ENST00000553569 PYM1Q9BRP8 204 aaKnown RBP25.06■■□□□ 1.6
TDP1-206ENST00000553569 C11orf84Q9BUA3 381 aaPredicted RBP25.06■■□□□ 1.6
TDP1-206ENST00000553569 KBTBD4Q9NVX7 518 aa25.06■■□□□ 1.6
TDP1-206ENST00000553569 PARP2Q9UGN5 583 aa25.06■■□□□ 1.6
TDP1-206ENST00000553569 MLH1P40692 756 aa25.05■■□□□ 1.6
TDP1-206ENST00000553569 DCAF4L1Q3SXM0 396 aa25.05■■□□□ 1.6
TDP1-206ENST00000553569 ZNF568Q3ZCX4 644 aa25.05■■□□□ 1.6
TDP1-206ENST00000553569 FSIP1Q8NA03 581 aa25.05■■□□□ 1.6
TDP1-206ENST00000553569 COLGALT1Q8NBJ5 622 aa25.05■■□□□ 1.6
TDP1-206ENST00000553569 BICD1Q96G01 975 aa25.05■■□□□ 1.6
TDP1-206ENST00000553569 FIZ1Q96SL8 496 aa25.05■■□□□ 1.6
TDP1-206ENST00000553569 LRRC27Q9C0I9 530 aa25.05■■□□□ 1.6
TDP1-206ENST00000553569 MAGEF1Q9HAY2 307 aa25.05■■□□□ 1.6
TDP1-206ENST00000553569 UBN1Q9NPG3 1134 aa25.05■■□□□ 1.6
TDP1-206ENST00000553569 AAASQ9NRG9 546 aa25.05■■□□□ 1.6
TDP1-206ENST00000553569 TBC1D13Q9NVG8 400 aa25.05■■□□□ 1.6
TDP1-206ENST00000553569 TBC1D7Q9P0N9 293 aa25.05■■□□□ 1.6
TDP1-206ENST00000553569 TNFSF13BQ9Y275 285 aa25.05■■□□□ 1.6
TDP1-206ENST00000553569 C5orf67F2Z3F1 127 aa25.04■■□□□ 1.6
TDP1-206ENST00000553569 H3BNC9 293 aa25.04■■□□□ 1.6
TDP1-206ENST00000553569 GTPBP6O43824 516 aaPredicted RBP25.04■■□□□ 1.6
TDP1-206ENST00000553569 CSPG5O95196 566 aa25.04■■□□□ 1.6
TDP1-206ENST00000553569 RB1P06400 928 aa25.04■■□□□ 1.6
TDP1-206ENST00000553569 HARSP12081 509 aaKnown RBP25.04■■□□□ 1.6
TDP1-206ENST00000553569 GAP43P17677 238 aa25.04■■□□□ 1.6
TDP1-206ENST00000553569 LAG3P18627 525 aa25.04■■□□□ 1.6
TDP1-206ENST00000553569 PBX3P40426 434 aa25.04■■□□□ 1.6
TDP1-206ENST00000553569 AFF1P51825 1210 aaKnown RBP25.04■■□□□ 1.6
TDP1-206ENST00000553569 AMPD3Q01432 767 aa25.04■■□□□ 1.6
TDP1-206ENST00000553569 RNASELQ05823 741 aaKnown RBP25.04■■□□□ 1.6
TDP1-206ENST00000553569 APBB1IPQ7Z5R6 666 aaPredicted RBP25.04■■□□□ 1.6
TDP1-206ENST00000553569 ZBTB33Q86T24 672 aa25.04■■□□□ 1.6
TDP1-206ENST00000553569 CEP57L1Q8IYX8 460 aa25.04■■□□□ 1.6
TDP1-206ENST00000553569 GAD1Q99259 594 aa25.04■■□□□ 1.6
TDP1-206ENST00000553569 PLVAPQ9BX97 442 aa25.04■■□□□ 1.6
TDP1-206ENST00000553569 GBP3Q9H0R5 595 aa25.04■■□□□ 1.6
TDP1-206ENST00000553569 CDT1Q9H211 546 aa25.04■■□□□ 1.6
TDP1-206ENST00000553569 PANK4Q9NVE7 773 aa25.04■■□□□ 1.6
TDP1-206ENST00000553569 KLK14Q9P0G3 267 aa25.04■■□□□ 1.6
TDP1-206ENST00000553569 ANKFY1Q9P2R3 1169 aa25.04■■□□□ 1.6
TDP1-206ENST00000553569 SERTAD1Q9UHV2 236 aa25.04■■□□□ 1.6
TDP1-206ENST00000553569 PCDHB12Q9Y5F1 795 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms