RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 M0QZ92 97 aa8.32□□□□□ -1.08
ATXN3-219ENST00000553488 IFIT3O14879 490 aaKnown RBP8.32□□□□□ -1.08
ATXN3-219ENST00000553488 BRD1O95696 1058 aa8.32□□□□□ -1.08
ATXN3-219ENST00000553488 SP100P23497 879 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-219ENST00000553488 TECP42680 631 aa8.32□□□□□ -1.08
ATXN3-219ENST00000553488 APOBRQ0VD83 1088 aa8.32□□□□□ -1.08
ATXN3-219ENST00000553488 WTAPQ15007 396 aa8.32□□□□□ -1.08
ATXN3-219ENST00000553488 FAM102BQ5T8I3 360 aa8.32□□□□□ -1.08
ATXN3-219ENST00000553488 PLPP4Q5VZY2 271 aa8.32□□□□□ -1.08
ATXN3-219ENST00000553488 PDE12Q6L8Q7 609 aaKnown RBP8.32□□□□□ -1.08
ATXN3-219ENST00000553488 MB21D2Q8IYB1 491 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-219ENST00000553488 KREMEN2Q8NCW0 462 aa8.32□□□□□ -1.08
ATXN3-219ENST00000553488 CUL5Q93034 780 aa8.32□□□□□ -1.08
ATXN3-219ENST00000553488 HSH2DQ96JZ2 352 aa8.32□□□□□ -1.08
ATXN3-219ENST00000553488 SMOC2Q9H3U7 446 aa8.32□□□□□ -1.08
ATXN3-219ENST00000553488 JPH1Q9HDC5 661 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-219ENST00000553488 JADE2Q9NQC1 790 aa8.32□□□□□ -1.08
ATXN3-219ENST00000553488 RGS18Q9NS28 235 aa8.32□□□□□ -1.08
ATXN3-219ENST00000553488 RNF19AQ9NV58 838 aa8.32□□□□□ -1.08
ATXN3-219ENST00000553488 TYW1Q9NV66 732 aaKnown RBP8.32□□□□□ -1.08
ATXN3-219ENST00000553488 LRFN2Q9ULH4 789 aa8.32□□□□□ -1.08
ATXN3-219ENST00000553488 LZTS1Q9Y250 596 aa8.32□□□□□ -1.08
ATXN3-219ENST00000553488 NOC2LQ9Y3T9 749 aaKnown RBP8.32□□□□□ -1.08
ATXN3-219ENST00000553488 PCDHB12Q9Y5F1 795 aa8.32□□□□□ -1.08
ATXN3-219ENST00000553488 GPR179Q6PRD1 2367 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 ZBTB42B2RXF5 422 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 C2CD4DB7Z1M9 353 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 DDAH1O94760 285 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 PLEKHA8P1O95397 391 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 SRGAP2BP0DMP2 458 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 FGFR1P11362 822 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 LAG3P18627 525 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 SMARCA1P28370 1054 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 PLCB3Q01970 1234 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 NUCB1Q02818 461 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 TYRO3Q06418 890 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 ITGB3BPQ13352 177 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-219ENST00000553488 MTMR3Q13615 1198 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 OCLNQ16625 522 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 UBE2SQ16763 222 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 RTN1Q16799 776 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 ZNF468Q5VIY5 522 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-219ENST00000553488 MTHFD1LQ6UB35 978 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 LRRC55Q6ZSA7 311 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 FAM43BQ6ZT52 329 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-219ENST00000553488 PLPPR4Q7Z2D5 763 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 CHD1LQ86WJ1 897 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 UBALD2Q8IYN6 164 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 THNSL1Q8IYQ7 743 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 GALNT6Q8NCL4 622 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 IGDCC4Q8TDY8 1250 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 MICAL1Q8TDZ2 1067 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 STK32AQ8WU08 396 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 EDARADDQ8WWZ3 215 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 MRPS27Q92552 414 aaKnown RBP8.31□□□□□ -1.08
ATXN3-219ENST00000553488 RRP36Q96EU6 259 aaKnown RBP8.31□□□□□ -1.08
ATXN3-219ENST00000553488 MAP3K14Q99558 947 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 ADAM2Q99965 735 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 MYL10Q9BUA6 226 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 APOL5Q9BWW9 433 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 POMKQ9H5K3 350 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 LY9Q9HBG7 655 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 C1orf112Q9NSG2 853 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 TMEM260Q9NX78 707 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 SLC9A2Q9UBY0 812 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 DMGDHQ9UI17 866 aaKnown RBP8.31□□□□□ -1.08
ATXN3-219ENST00000553488 SORCS3Q9UPU3 1222 aa8.31□□□□□ -1.08
ATXN3-219ENST00000553488 NFASCO94856 1347 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 ACACBO00763 2458 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 IGKV6D-21A0A0A0MT36 114 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 ERICH2A1L162 156 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 E7EWF7 191 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 MAFGO15525 162 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 RPS6KA5O75582 802 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 ARP10275 920 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 EPXP11678 715 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 GSPT1P15170 499 aaKnown RBP8.3□□□□□ -1.08
ATXN3-219ENST00000553488 HOXB8P17481 243 aaPredicted RBP8.3□□□□□ -1.08
ATXN3-219ENST00000553488 IBSPP21815 317 aaPredicted RBP8.3□□□□□ -1.08
ATXN3-219ENST00000553488 ACTR2P61160 394 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 FAM189BP81408 668 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 PTH1RQ03431 593 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 SFSWAPQ12872 951 aaKnown RBP8.3□□□□□ -1.08
ATXN3-219ENST00000553488 TRDNQ13061 729 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 DSC3Q14574 896 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 SPOUT1Q5T280 376 aaKnown RBP8.3□□□□□ -1.08
ATXN3-219ENST00000553488 CWF19L1Q69YN2 538 aaKnown RBP8.3□□□□□ -1.08
ATXN3-219ENST00000553488 B4GALNT3Q6L9W6 998 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 LLGL2Q6P1M3 1020 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 SLC24A5Q71RS6 500 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 CATIPQ7Z7H3 387 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 FAM228AQ86W67 206 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 KIAA0319LQ8IZA0 1049 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 ZNF654Q8IZM8 581 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 NME8Q8N427 588 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 SRBD1Q8N5C6 995 aaKnown RBP8.3□□□□□ -1.08
ATXN3-219ENST00000553488 CYP2W1Q8TAV3 490 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 MYO19Q96H55 970 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 TCF25Q9BQ70 676 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 AZI2Q9H6S1 392 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms