RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 HDAC6Q9UBN7 1215 aa16.66■□□□□ 0.26
ABCD4-218ENST00000553486 KCNG1Q9UIX4 513 aa16.66■□□□□ 0.26
ABCD4-218ENST00000553486 A0A087X0T9 212 aa16.65■□□□□ 0.26
ABCD4-218ENST00000553486 P4HA2O15460 535 aa16.65■□□□□ 0.26
ABCD4-218ENST00000553486 FAM228BP0C875 321 aa16.65■□□□□ 0.26
ABCD4-218ENST00000553486 TRIM49P0CI25 452 aa16.65■□□□□ 0.26
ABCD4-218ENST00000553486 TRIM49CP0CI26 452 aa16.65■□□□□ 0.26
ABCD4-218ENST00000553486 NPTX2P47972 431 aa16.65■□□□□ 0.26
ABCD4-218ENST00000553486 VAMP7P51809 220 aa16.65■□□□□ 0.26
ABCD4-218ENST00000553486 PRKCEQ02156 737 aa16.65■□□□□ 0.26
ABCD4-218ENST00000553486 CNTN2Q02246 1040 aa16.65■□□□□ 0.26
ABCD4-218ENST00000553486 XKR3Q5GH77 459 aa16.65■□□□□ 0.26
ABCD4-218ENST00000553486 TMCO3Q6UWJ1 677 aa16.65■□□□□ 0.26
ABCD4-218ENST00000553486 PLEKHH3Q7Z736 793 aa16.65■□□□□ 0.26
ABCD4-218ENST00000553486 NCAPG2Q86XI2 1143 aa16.65■□□□□ 0.26
ABCD4-218ENST00000553486 CCDC60Q8IWA6 550 aaPredicted RBP16.65■□□□□ 0.26
ABCD4-218ENST00000553486 TMEM161BQ8NDZ6 487 aa16.65■□□□□ 0.26
ABCD4-218ENST00000553486 RPGRIP1Q96KN7 1286 aa16.65■□□□□ 0.26
ABCD4-218ENST00000553486 STK33Q9BYT3 514 aa16.65■□□□□ 0.26
ABCD4-218ENST00000553486 SEPT9Q9UHD8 586 aaPredicted RBP16.65■□□□□ 0.26
ABCD4-218ENST00000553486 ADAMTS1Q9UHI8 967 aa16.65■□□□□ 0.26
ABCD4-218ENST00000553486 OGDHLQ9ULD0 1010 aa16.65■□□□□ 0.26
ABCD4-218ENST00000553486 TBX20Q9UMR3 447 aa16.65■□□□□ 0.26
ABCD4-218ENST00000553486 CNMDO75829 334 aa16.64■□□□□ 0.25
ABCD4-218ENST00000553486 PRLRP16471 622 aa16.64■□□□□ 0.25
ABCD4-218ENST00000553486 RFX1P22670 979 aa16.64■□□□□ 0.25
ABCD4-218ENST00000553486 ABCD1P33897 745 aa16.64■□□□□ 0.25
ABCD4-218ENST00000553486 RGS2P41220 211 aa16.64■□□□□ 0.25
ABCD4-218ENST00000553486 MNX1P50219 401 aaPredicted RBP16.64■□□□□ 0.25
ABCD4-218ENST00000553486 RTP1P59025 263 aa16.64■□□□□ 0.25
ABCD4-218ENST00000553486 CCNA1P78396 465 aa16.64■□□□□ 0.25
ABCD4-218ENST00000553486 SP4Q02446 784 aa16.64■□□□□ 0.25
ABCD4-218ENST00000553486 PTK2Q05397 1052 aa16.64■□□□□ 0.25
ABCD4-218ENST00000553486 CBWD6Q4V339 395 aa16.64■□□□□ 0.25
ABCD4-218ENST00000553486 CBWD3Q5JTY5 395 aa16.64■□□□□ 0.25
ABCD4-218ENST00000553486 CBWD5Q5RIA9 395 aa16.64■□□□□ 0.25
ABCD4-218ENST00000553486 ZNF571Q7Z3V5 609 aaPredicted RBP16.64■□□□□ 0.25
ABCD4-218ENST00000553486 APBA2Q99767 749 aa16.64■□□□□ 0.25
ABCD4-218ENST00000553486 ARID3AQ99856 593 aa16.64■□□□□ 0.25
ABCD4-218ENST00000553486 CBWD1Q9BRT8 395 aa16.64■□□□□ 0.25
ABCD4-218ENST00000553486 PARD6BQ9BYG5 372 aa16.64■□□□□ 0.25
ABCD4-218ENST00000553486 INTS2Q9H0H0 1204 aaKnown RBP16.64■□□□□ 0.25
ABCD4-218ENST00000553486 ATP6V0A4Q9HBG4 840 aa16.64■□□□□ 0.25
ABCD4-218ENST00000553486 CYP26B1Q9NR63 512 aa16.64■□□□□ 0.25
ABCD4-218ENST00000553486 OGFRQ9NZT2 677 aa16.64■□□□□ 0.25
ABCD4-218ENST00000553486 DDX41Q9UJV9 622 aaKnown RBP16.64■□□□□ 0.25
ABCD4-218ENST00000553486 CAPN6Q9Y6Q1 641 aa16.64■□□□□ 0.25
ABCD4-218ENST00000553486 H0YCG3 227 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 ATG7O95352 703 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 SLC25A27O95847 323 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 CCDC172P0C7W6 258 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 COPB2P35606 906 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 NAP1L1P55209 391 aaKnown RBP16.63■□□□□ 0.25
ABCD4-218ENST00000553486 CACNB2Q08289 660 aaPredicted RBP16.63■□□□□ 0.25
ABCD4-218ENST00000553486 NAB2Q15742 525 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 SEPT14Q6ZU15 432 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 CYFIP1Q7L576 1253 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 MAP4K3Q8IVH8 894 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 VTI1AQ96AJ9 217 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 IFT74Q96LB3 600 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 PDLIM7Q9NR12 457 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 DNAJC12Q9UKB3 198 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 COL6A3P12111 3177 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 IGSF9BQ9UPX0 1349 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 DENND3A2RUS2 1198 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 GFPT2O94808 682 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 TUBBP07437 444 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 ZSCAN20P17040 1043 aaPredicted RBP16.63■□□□□ 0.25
ABCD4-218ENST00000553486 SOX5P35711 763 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 SP2Q02086 613 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 CCL14Q16627 93 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 KIAA0753Q2KHM9 967 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 GJB7Q6PEY0 223 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 MPHOSPH6Q99547 160 aaKnown RBP16.63■□□□□ 0.25
ABCD4-218ENST00000553486 EPC1Q9H2F5 836 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 ZNF302Q9NR11 478 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 APEX2Q9UBZ4 518 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 AJAP1Q9UKB5 411 aaPredicted RBP16.63■□□□□ 0.25
ABCD4-218ENST00000553486 SNX12Q9UMY4 172 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 ATP8B3O60423 1300 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 EMSYQ7Z589 1322 aa16.63■□□□□ 0.25
ABCD4-218ENST00000553486 LAMA2P24043 3122 aaKnown RBP16.62■□□□□ 0.25
ABCD4-218ENST00000553486 A0A1W2PPC1 479 aa16.62■□□□□ 0.25
ABCD4-218ENST00000553486 BTNL10A8MVZ5 291 aa16.62■□□□□ 0.25
ABCD4-218ENST00000553486 TISP43B9A030 160 aa16.62■□□□□ 0.25
ABCD4-218ENST00000553486 EDNRBP24530 442 aa16.62■□□□□ 0.25
ABCD4-218ENST00000553486 BMS1Q14692 1282 aaKnown RBP16.62■□□□□ 0.25
ABCD4-218ENST00000553486 BRD3Q15059 726 aa16.62■□□□□ 0.25
ABCD4-218ENST00000553486 MSANTD4Q8NCY6 345 aa16.62■□□□□ 0.25
ABCD4-218ENST00000553486 CAGE1Q8TC20 777 aa16.62■□□□□ 0.25
ABCD4-218ENST00000553486 MAFBQ9Y5Q3 323 aaPredicted RBP16.62■□□□□ 0.25
ABCD4-218ENST00000553486 SOWAHBA6NEL2 793 aa16.61■□□□□ 0.25
ABCD4-218ENST00000553486 SORBS3O60504 671 aa16.61■□□□□ 0.25
ABCD4-218ENST00000553486 SRGAP2O75044 1071 aa16.61■□□□□ 0.25
ABCD4-218ENST00000553486 TCP1P17987 556 aaKnown RBP16.61■□□□□ 0.25
ABCD4-218ENST00000553486 CNGA1P29973 690 aa16.61■□□□□ 0.25
ABCD4-218ENST00000553486 MCCD1P59942 119 aaPredicted RBP16.61■□□□□ 0.25
ABCD4-218ENST00000553486 MAP2K5Q13163 448 aa16.61■□□□□ 0.25
ABCD4-218ENST00000553486 DRAP1Q14919 205 aaPredicted RBP16.61■□□□□ 0.25
ABCD4-218ENST00000553486 BSNDQ8WZ55 320 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms