RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 RALGAPA1Q6GYQ0 2036 aa13.32□□□□□ -0.28
SNRPF-205ENST00000553192 MEIS1O00470 390 aa13.32□□□□□ -0.28
SNRPF-205ENST00000553192 POMCP01189 267 aa13.32□□□□□ -0.28
SNRPF-205ENST00000553192 SKIP12755 728 aa13.32□□□□□ -0.28
SNRPF-205ENST00000553192 NOVA1P51513 510 aaKnown RBP13.32□□□□□ -0.28
SNRPF-205ENST00000553192 PDE1AP54750 535 aa13.32□□□□□ -0.28
SNRPF-205ENST00000553192 PPP2R5DQ14738 602 aa13.32□□□□□ -0.28
SNRPF-205ENST00000553192 CEP55Q53EZ4 464 aa13.32□□□□□ -0.28
SNRPF-205ENST00000553192 LONP2Q86WA8 852 aa13.32□□□□□ -0.28
SNRPF-205ENST00000553192 NPAS3Q8IXF0 933 aa13.32□□□□□ -0.28
SNRPF-205ENST00000553192 COLGALT2Q8IYK4 626 aa13.32□□□□□ -0.28
SNRPF-205ENST00000553192 ZNF710Q8N1W2 664 aa13.32□□□□□ -0.28
SNRPF-205ENST00000553192 RRP36Q96EU6 259 aaKnown RBP13.32□□□□□ -0.28
SNRPF-205ENST00000553192 PGBD1Q96JS3 809 aa13.32□□□□□ -0.28
SNRPF-205ENST00000553192 SCNM1Q9BWG6 230 aa13.32□□□□□ -0.28
SNRPF-205ENST00000553192 SMOC1Q9H4F8 434 aa13.32□□□□□ -0.28
SNRPF-205ENST00000553192 SDK1Q7Z5N4 2213 aa13.32□□□□□ -0.28
SNRPF-205ENST00000553192 ECI2O75521 394 aa13.31□□□□□ -0.28
SNRPF-205ENST00000553192 CHRNB1P11230 501 aa13.31□□□□□ -0.28
SNRPF-205ENST00000553192 TMOD1P28289 359 aa13.31□□□□□ -0.28
SNRPF-205ENST00000553192 KIF5BP33176 963 aa13.31□□□□□ -0.28
SNRPF-205ENST00000553192 RBM25P49756 843 aaKnown RBP13.31□□□□□ -0.28
SNRPF-205ENST00000553192 ZNF252P-AS1Q0IIN9 211 aa13.31□□□□□ -0.28
SNRPF-205ENST00000553192 IMMTQ16891 758 aaKnown RBP13.31□□□□□ -0.28
SNRPF-205ENST00000553192 PLA2G2CQ5R387 149 aa13.31□□□□□ -0.28
SNRPF-205ENST00000553192 MIS18BP1Q6P0N0 1132 aa13.31□□□□□ -0.28
SNRPF-205ENST00000553192 URGCPQ8TCY9 931 aa13.31□□□□□ -0.28
SNRPF-205ENST00000553192 NLRP7Q8WX94 980 aa13.31□□□□□ -0.28
SNRPF-205ENST00000553192 SCLT1Q96NL6 688 aa13.31□□□□□ -0.28
SNRPF-205ENST00000553192 C2orf42Q9NWW7 574 aa13.31□□□□□ -0.28
SNRPF-205ENST00000553192 FBXW11Q9UKB1 542 aa13.31□□□□□ -0.28
SNRPF-205ENST00000553192 CEP131Q9UPN4 1083 aa13.31□□□□□ -0.28
SNRPF-205ENST00000553192 PIN4Q9Y237 131 aaKnown RBP13.31□□□□□ -0.28
SNRPF-205ENST00000553192 IGSF10Q6WRI0 2623 aa13.3□□□□□ -0.28
SNRPF-205ENST00000553192 SDSP20132 328 aa13.3□□□□□ -0.28
SNRPF-205ENST00000553192 MFAP1P55081 439 aaKnown RBP13.3□□□□□ -0.28
SNRPF-205ENST00000553192 HEATR6Q6AI08 1181 aaKnown RBP13.3□□□□□ -0.28
SNRPF-205ENST00000553192 MRPL10Q7Z7H8 261 aaKnown RBP13.3□□□□□ -0.28
SNRPF-205ENST00000553192 DNASE1L2Q92874 299 aa13.3□□□□□ -0.28
SNRPF-205ENST00000553192 FAM193BQ96PV7 902 aaPredicted RBP13.3□□□□□ -0.28
SNRPF-205ENST00000553192 GPR62Q9BZJ7 368 aa13.3□□□□□ -0.28
SNRPF-205ENST00000553192 RSAD1Q9HA92 442 aa13.3□□□□□ -0.28
SNRPF-205ENST00000553192 FNIP2Q9P278 1114 aa13.3□□□□□ -0.28
SNRPF-205ENST00000553192 PCDHB2Q9Y5E7 798 aa13.3□□□□□ -0.28
SNRPF-205ENST00000553192 GREB1Q4ZG55 1949 aa13.29□□□□□ -0.28
SNRPF-205ENST00000553192 MTCL1Q9Y4B5 1905 aaKnown RBP13.29□□□□□ -0.28
SNRPF-205ENST00000553192 A0A087WZ62 844 aa13.29□□□□□ -0.28
SNRPF-205ENST00000553192 CCER2I3L3R5 266 aa13.29□□□□□ -0.28
SNRPF-205ENST00000553192 MAN2B1O00754 1011 aa13.29□□□□□ -0.28
SNRPF-205ENST00000553192 NRG2O14511 850 aaPredicted RBP13.29□□□□□ -0.28
SNRPF-205ENST00000553192 IFIT3O14879 490 aaKnown RBP13.29□□□□□ -0.28
SNRPF-205ENST00000553192 ZNF862O60290 1169 aa13.29□□□□□ -0.28
SNRPF-205ENST00000553192 EPN2O95208 641 aa13.29□□□□□ -0.28
SNRPF-205ENST00000553192 PAPSS2O95340 614 aaPredicted RBP13.29□□□□□ -0.28
SNRPF-205ENST00000553192 PLEKHA8P1O95397 391 aa13.29□□□□□ -0.28
SNRPF-205ENST00000553192 SMARCA1P28370 1054 aa13.29□□□□□ -0.28
SNRPF-205ENST00000553192 OR1G1P47890 313 aa13.29□□□□□ -0.28
SNRPF-205ENST00000553192 RAB27AP51159 221 aa13.29□□□□□ -0.28
SNRPF-205ENST00000553192 TANGO2Q6ICL3 276 aa13.29□□□□□ -0.28
SNRPF-205ENST00000553192 CEP68Q76N32 757 aa13.29□□□□□ -0.28
SNRPF-205ENST00000553192 SRBD1Q8N5C6 995 aaKnown RBP13.29□□□□□ -0.28
SNRPF-205ENST00000553192 FAM3CQ92520 227 aa13.29□□□□□ -0.28
SNRPF-205ENST00000553192 PGBD4Q96DM1 585 aa13.29□□□□□ -0.28
SNRPF-205ENST00000553192 BBC3Q96PG8 261 aaPredicted RBP13.29□□□□□ -0.28
SNRPF-205ENST00000553192 FDXACB1Q9BRP7 624 aaPredicted RBP13.29□□□□□ -0.28
SNRPF-205ENST00000553192 DSCC1Q9BVC3 393 aa13.29□□□□□ -0.28
SNRPF-205ENST00000553192 GCOM2Q9BZD3 368 aaPredicted RBP13.29□□□□□ -0.28
SNRPF-205ENST00000553192 HCFC1R1Q9NWW0 138 aa13.29□□□□□ -0.28
SNRPF-205ENST00000553192 KANSL3Q9P2N6 904 aa13.29□□□□□ -0.28
SNRPF-205ENST00000553192 GABBR1Q9UBS5 961 aa13.29□□□□□ -0.28
SNRPF-205ENST00000553192 LAMA5O15230 3695 aa13.29□□□□□ -0.28
SNRPF-205ENST00000553192 hCG_1642624A0A1W2PR95 340 aa13.28□□□□□ -0.28
SNRPF-205ENST00000553192 CCL16O15467 120 aa13.28□□□□□ -0.28
SNRPF-205ENST00000553192 HNRNPA1P09651 372 aaKnown RBP eCLIP13.28□□□□□ -0.28
SNRPF-205ENST00000553192 RAP1GAPP47736 663 aa13.28□□□□□ -0.28
SNRPF-205ENST00000553192 DSC1Q08554 894 aa13.28□□□□□ -0.28
SNRPF-205ENST00000553192 WDR44Q5JSH3 913 aa13.28□□□□□ -0.28
SNRPF-205ENST00000553192 UBXN11Q5T124 520 aa13.28□□□□□ -0.28
SNRPF-205ENST00000553192 RNF43Q68DV7 783 aa13.28□□□□□ -0.28
SNRPF-205ENST00000553192 TCEAL6Q6IPX3 200 aa13.28□□□□□ -0.28
SNRPF-205ENST00000553192 GPR65Q8IYL9 337 aa13.28□□□□□ -0.28
SNRPF-205ENST00000553192 CMTR1Q8N1G2 835 aaKnown RBP13.28□□□□□ -0.28
SNRPF-205ENST00000553192 SPEM1Q8N4L4 309 aa13.28□□□□□ -0.28
SNRPF-205ENST00000553192 ING5Q8WYH8 240 aa13.28□□□□□ -0.28
SNRPF-205ENST00000553192 TCEAL3Q969E4 200 aa13.28□□□□□ -0.28
SNRPF-205ENST00000553192 LOXL4Q96JB6 756 aa13.28□□□□□ -0.28
SNRPF-205ENST00000553192 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.28□□□□□ -0.281e-6■■■■□ 22.8
SNRPF-205ENST00000553192 DNMT3BQ9UBC3 853 aaKnown RBP13.28□□□□□ -0.28
SNRPF-205ENST00000553192 SEC63Q9UGP8 760 aaKnown RBP13.28□□□□□ -0.28
SNRPF-205ENST00000553192 PCDHB15Q9Y5E8 787 aa13.28□□□□□ -0.28
SNRPF-205ENST00000553192 NOTCH4Q99466 2003 aa13.27□□□□□ -0.28
SNRPF-205ENST00000553192 FAM86B1E9PN63 330 aa13.27□□□□□ -0.29
SNRPF-205ENST00000553192 CAPNS1P04632 268 aa13.27□□□□□ -0.29
SNRPF-205ENST00000553192 C8AP07357 584 aa13.27□□□□□ -0.29
SNRPF-205ENST00000553192 FAM86B2P0C5J1 330 aa13.27□□□□□ -0.29
SNRPF-205ENST00000553192 SFPQP23246 707 aaKnown RBP eCLIP13.27□□□□□ -0.29
SNRPF-205ENST00000553192 FCARP24071 287 aa13.27□□□□□ -0.29
SNRPF-205ENST00000553192 HOXA9P31269 272 aa13.27□□□□□ -0.29
SNRPF-205ENST00000553192 GRM2Q14416 872 aa13.27□□□□□ -0.29
SNRPF-205ENST00000553192 SH3PXD2AQ5TCZ1 1133 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms