RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 EPC2Q52LR7 807 aa9.85□□□□□ -0.83
RAB3IP-218ENST00000553099 CELF3Q5SZQ8 465 aaKnown RBP9.85□□□□□ -0.83
RAB3IP-218ENST00000553099 LMBRD2Q68DH5 695 aaPredicted RBP9.85□□□□□ -0.83
RAB3IP-218ENST00000553099 KRT39Q6A163 491 aa9.85□□□□□ -0.83
RAB3IP-218ENST00000553099 GPRC5AQ8NFJ5 357 aa9.85□□□□□ -0.83
RAB3IP-218ENST00000553099 CCDC94Q9BW85 323 aaPredicted RBP9.85□□□□□ -0.83
RAB3IP-218ENST00000553099 GPR88Q9GZN0 384 aa9.85□□□□□ -0.83
RAB3IP-218ENST00000553099 SNX12Q9UMY4 172 aa9.85□□□□□ -0.83
RAB3IP-218ENST00000553099 BTBD19C9JJ37 291 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 FOXN3O00409 490 aaPredicted RBP9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 DDX3XO00571 662 aaKnown RBP eCLIP9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 P4HA2O15460 535 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 SEC31AO94979 1220 aaKnown RBP9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 CCDC172P0C7W6 258 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 NAMPTP43490 491 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 ACOT2P49753 483 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 CCNA1P78396 465 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 CKAP4Q07065 602 aaKnown RBP9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 CYP24A1Q07973 514 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 BMS1Q14692 1282 aaKnown RBP9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 GJC2Q5T442 439 aaPredicted RBP9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 KCNV1Q6PIU1 500 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 TMCO3Q6UWJ1 677 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 ARMCX2Q7L311 632 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 USP37Q86T82 979 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 LRRC71Q8N4P6 559 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 RNF10Q8N5U6 811 aaKnown RBP9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 TMEM174Q8WUU8 243 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 KAT5Q92993 513 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 GPR20Q99678 358 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 NIFKQ9BYG3 293 aaKnown RBP9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 PACSIN2Q9UNF0 486 aaPredicted RBP9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 TRPC6Q9Y210 931 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 IVNS1ABPQ9Y6Y0 642 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 CETPP11597 493 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 ABCB4P21439 1286 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 GARTP22102 1010 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 RFX1P22670 979 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 ADORA2AP29274 412 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 RFC5P40937 340 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 C10orf76Q5T2E6 689 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 CCDC181Q5TID7 509 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 LNX1Q8TBB1 728 aaPredicted RBP9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 AFAP1L1Q8TED9 768 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 COG1Q8WTW3 980 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 ZNF668Q96K58 619 aaPredicted RBP9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 ZBTB45Q96K62 511 aaPredicted RBP9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 OSBPL9Q96SU4 736 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 TARS2Q9BW92 718 aaKnown RBP9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 GOLPH3Q9H4A6 298 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 HYOU1Q9Y4L1 999 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 SIP14410 1827 aa9.84□□□□□ -0.83
RAB3IP-218ENST00000553099 ZNF233A6NK53 670 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 H2AFZP0C0S5 128 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 TNNI1P19237 187 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 ARL2P36404 184 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 GTF2A2P52657 109 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 CAPSQ13938 189 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 TTLL4Q14679 1199 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 H2AFVQ71UI9 128 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 TAS1R2Q8TE23 839 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 TRAPPC12Q8WVT3 735 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 SEMA4DQ92854 862 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 FAM167AQ96KS9 214 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 FNBP1Q96RU3 617 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 ANKZF1Q9H8Y5 726 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 GBA2Q9HCG7 927 aaPredicted RBP9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 TMEM8AQ9HCN3 771 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 EHD2Q9NZN4 543 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 KCNG1Q9UIX4 513 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 AGO2Q9UKV8 859 aaKnown RBP9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 ASB14A6NK59 587 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 PDE2AO00408 941 aaPredicted RBP9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 CELF2O95319 508 aaKnown RBP9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 SRGAP2CP0DJJ0 459 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 TNFAIP3P21580 790 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 ABCD1P33897 745 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 C2orf54Q08AI8 447 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 TARBP2Q15633 366 aaKnown RBP9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 FMNL3Q8IVF7 1028 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 FBXL13Q8NEE6 735 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 SLC20A1Q8WUM9 679 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 PRPF31Q8WWY3 499 aaKnown RBP9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 BRI3BPQ8WY22 251 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 BBXQ8WY36 941 aaPredicted RBP9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 MS4A4AQ96JQ5 239 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 FBXL18Q96ME1 805 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 CEP89Q96ST8 783 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 PNKPQ96T60 521 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 PI4K2AQ9BTU6 479 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 MSTO1Q9BUK6 570 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 TLR10Q9BXR5 811 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 ZNF446Q9NWS9 450 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 SMARCAL1Q9NZC9 954 aa9.83□□□□□ -0.84
RAB3IP-218ENST00000553099 TCP1P17987 556 aaKnown RBP9.82□□□□□ -0.84
RAB3IP-218ENST00000553099 NLRP11P59045 1033 aaKnown RBP9.82□□□□□ -0.84
RAB3IP-218ENST00000553099 CBX1P83916 185 aa9.82□□□□□ -0.84
RAB3IP-218ENST00000553099 SEZ6Q53EL9 994 aa9.82□□□□□ -0.84
RAB3IP-218ENST00000553099 TAF3Q5VWG9 929 aa9.82□□□□□ -0.84
RAB3IP-218ENST00000553099 SV2AQ7L0J3 742 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms