RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 C2CD2LO14523 706 aa12.81□□□□□ -0.36
SUPT16H-202ENST00000552829 PRC1O43663 620 aa12.81□□□□□ -0.36
SUPT16H-202ENST00000552829 OATP04181 439 aa12.81□□□□□ -0.36
SUPT16H-202ENST00000552829 URODP06132 367 aa12.81□□□□□ -0.36
SUPT16H-202ENST00000552829 MYBP10242 640 aa12.81□□□□□ -0.36
SUPT16H-202ENST00000552829 TDGF1P13385 188 aa12.81□□□□□ -0.36
SUPT16H-202ENST00000552829 ADCY7P51828 1080 aa12.81□□□□□ -0.36
SUPT16H-202ENST00000552829 NAPAP54920 295 aa12.81□□□□□ -0.36
SUPT16H-202ENST00000552829 DSG1Q02413 1049 aa12.81□□□□□ -0.36
SUPT16H-202ENST00000552829 FZD5Q13467 585 aa12.81□□□□□ -0.36
SUPT16H-202ENST00000552829 PARM1Q6UWI2 310 aa12.81□□□□□ -0.36
SUPT16H-202ENST00000552829 ST13P5Q8NFI4 369 aaPredicted RBP12.81□□□□□ -0.36
SUPT16H-202ENST00000552829 NETO1Q8TDF5 533 aa12.81□□□□□ -0.36
SUPT16H-202ENST00000552829 ZNF577Q9BSK1 485 aa12.81□□□□□ -0.36
SUPT16H-202ENST00000552829 FAM126AQ9BYI3 521 aaPredicted RBP12.81□□□□□ -0.36
SUPT16H-202ENST00000552829 LTB4R2Q9NPC1 389 aa12.81□□□□□ -0.36
SUPT16H-202ENST00000552829 CHST7Q9NS84 486 aa12.81□□□□□ -0.36
SUPT16H-202ENST00000552829 KANSL3Q9P2N6 904 aa12.81□□□□□ -0.36
SUPT16H-202ENST00000552829 PCDHB2Q9Y5E7 798 aa12.81□□□□□ -0.36
SUPT16H-202ENST00000552829 CNTNAP5Q8WYK1 1306 aa12.81□□□□□ -0.36
SUPT16H-202ENST00000552829 A0A087WZ62 844 aa12.8□□□□□ -0.36
SUPT16H-202ENST00000552829 SHISA7A6NL88 538 aa12.8□□□□□ -0.36
SUPT16H-202ENST00000552829 STBD1O95210 358 aa12.8□□□□□ -0.36
SUPT16H-202ENST00000552829 SPATA31D3P0C874 917 aa12.8□□□□□ -0.36
SUPT16H-202ENST00000552829 SFPQP23246 707 aaKnown RBP eCLIP12.8□□□□□ -0.36
SUPT16H-202ENST00000552829 RPS9P46781 194 aaKnown RBP12.8□□□□□ -0.36
SUPT16H-202ENST00000552829 GLUD2P49448 558 aa12.8□□□□□ -0.36
SUPT16H-202ENST00000552829 PRKCEQ02156 737 aa12.8□□□□□ -0.36
SUPT16H-202ENST00000552829 CASC1Q6TDU7 716 aa12.8□□□□□ -0.36
SUPT16H-202ENST00000552829 SPATA31D4Q6ZUB0 917 aa12.8□□□□□ -0.36
SUPT16H-202ENST00000552829 GET4Q7L5D6 327 aaPredicted RBP12.8□□□□□ -0.36
SUPT16H-202ENST00000552829 COLGALT2Q8IYK4 626 aa12.8□□□□□ -0.36
SUPT16H-202ENST00000552829 GPR65Q8IYL9 337 aa12.8□□□□□ -0.36
SUPT16H-202ENST00000552829 URGCPQ8TCY9 931 aa12.8□□□□□ -0.36
SUPT16H-202ENST00000552829 MAP4K1Q92918 833 aa12.8□□□□□ -0.36
SUPT16H-202ENST00000552829 PGBD4Q96DM1 585 aa12.8□□□□□ -0.36
SUPT16H-202ENST00000552829 CHAMP1Q96JM3 812 aa12.8□□□□□ -0.36
SUPT16H-202ENST00000552829 TMEM87BQ96K49 555 aa12.8□□□□□ -0.36
SUPT16H-202ENST00000552829 MBOAT7Q96N66 472 aa12.8□□□□□ -0.36
SUPT16H-202ENST00000552829 SCLT1Q96NL6 688 aa12.8□□□□□ -0.36
SUPT16H-202ENST00000552829 FDXACB1Q9BRP7 624 aaPredicted RBP12.8□□□□□ -0.36
SUPT16H-202ENST00000552829 GLT8D2Q9H1C3 349 aa12.8□□□□□ -0.36
SUPT16H-202ENST00000552829 CDH7Q9ULB5 785 aa12.8□□□□□ -0.36
SUPT16H-202ENST00000552829 PIN4Q9Y237 131 aaKnown RBP12.8□□□□□ -0.36
SUPT16H-202ENST00000552829 TDRD15B5MCY1 1934 aaKnown RBP12.8□□□□□ -0.36
SUPT16H-202ENST00000552829 SDK1Q7Z5N4 2213 aa12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 SMCO2A6NFE2 343 aa12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 CCDC69A6NI79 296 aa12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 TGM5O43548 720 aa12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 GAS2O43903 313 aaKnown RBP12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 LRP3O75074 770 aa12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 ZMYND10O75800 440 aa12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 DSC1Q08554 894 aa12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 COL9A2Q14055 689 aaPredicted RBP12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 UBXN2BQ14CS0 331 aa12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 UGCGQ16739 394 aa12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 ZBTB41Q5SVQ8 909 aa12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 UBXN11Q5T124 520 aa12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 MAMSTRQ6ZN01 415 aa12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 NFXL1Q6ZNB6 911 aa12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 ZNF410Q86VK4 478 aa12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 RAB11FIP4Q86YS3 637 aa12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 ZNF687Q8N1G0 1237 aa12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 KCNV2Q8TDN2 545 aa12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 LENG9Q96B70 501 aa12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 NELL2Q99435 816 aa12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 NIFKQ9BYG3 293 aaKnown RBP12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 INO80BQ9C086 356 aaPredicted RBP12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 RSAD1Q9HA92 442 aa12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 PIDD1Q9HB75 910 aa12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 FNIP2Q9P278 1114 aa12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 GMEB2Q9UKD1 530 aa12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 CNTNAP2Q9UHC6 1331 aa12.79□□□□□ -0.36
SUPT16H-202ENST00000552829 WDR64B1ANS9 1081 aa12.78□□□□□ -0.36
SUPT16H-202ENST00000552829 hCG_1984214I3L0E3 225 aa12.78□□□□□ -0.36
SUPT16H-202ENST00000552829 ADAMTS3O15072 1205 aa12.78□□□□□ -0.36
SUPT16H-202ENST00000552829 CD72P21854 359 aa12.78□□□□□ -0.36
SUPT16H-202ENST00000552829 FSHRP23945 695 aa12.78□□□□□ -0.36
SUPT16H-202ENST00000552829 CHMLP26374 656 aa12.78□□□□□ -0.36
SUPT16H-202ENST00000552829 TARSP26639 723 aaKnown RBP12.78□□□□□ -0.36
SUPT16H-202ENST00000552829 PMLP29590 882 aa12.78□□□□□ -0.36
SUPT16H-202ENST00000552829 HOXA11P31270 313 aaPredicted RBP12.78□□□□□ -0.36
SUPT16H-202ENST00000552829 CIITAP33076 1130 aa12.78□□□□□ -0.36
SUPT16H-202ENST00000552829 MCM5P33992 734 aa12.78□□□□□ -0.36
SUPT16H-202ENST00000552829 SETQ01105 290 aaPredicted RBP12.78□□□□□ -0.36
SUPT16H-202ENST00000552829 SPEM2Q0P670 501 aa12.78□□□□□ -0.36
SUPT16H-202ENST00000552829 TSSK4Q6SA08 328 aa12.78□□□□□ -0.36
SUPT16H-202ENST00000552829 MTSS1LQ765P7 747 aa12.78□□□□□ -0.36
SUPT16H-202ENST00000552829 SGMS1Q86VZ5 419 aa12.78□□□□□ -0.36
SUPT16H-202ENST00000552829 PALB2Q86YC2 1186 aa12.78□□□□□ -0.36
SUPT16H-202ENST00000552829 ZNF713Q8N859 430 aaPredicted RBP12.78□□□□□ -0.36
SUPT16H-202ENST00000552829 PHKBQ93100 1093 aa12.78□□□□□ -0.36
SUPT16H-202ENST00000552829 FAM193BQ96PV7 902 aaPredicted RBP12.78□□□□□ -0.36
SUPT16H-202ENST00000552829 IFT122Q9HBG6 1241 aa12.78□□□□□ -0.36
SUPT16H-202ENST00000552829 DISC1Q9NRI5 854 aa12.78□□□□□ -0.36
SUPT16H-202ENST00000552829 AGPAT5Q9NUQ2 364 aa12.78□□□□□ -0.36
SUPT16H-202ENST00000552829 BARHL2Q9NY43 387 aa12.78□□□□□ -0.36
SUPT16H-202ENST00000552829 PRG3Q9Y2Y8 225 aaPredicted RBP12.78□□□□□ -0.36
SUPT16H-202ENST00000552829 F8W810 466 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms