RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	RNF186	Q9NXI6	227 aa		13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	FBXL5	Q9UKA1	691 aa		13.82	□□□□□ -0.2
CACNB3-223	ENST00000552480	LRRC53	A6NM62	1247 aa		13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	MYL3	P08590	195 aa		13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	SMIM10L2A	P0DMW4	78 aa		13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	SMIM10L2B	P0DMW5	78 aa		13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	SLC9A1	P19634	815 aa		13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	PTEN	P60484	403 aa		13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	POLR2F	P61218	127 aa	Known RBP	13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	DLG4	P78352	724 aa		13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	MTF1	Q14872	753 aa		13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	FSCN1	Q16658	493 aa	Known RBP	13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	KIAA0753	Q2KHM9	967 aa		13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	CBWD6	Q4V339	395 aa		13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	CBWD3	Q5JTY5	395 aa		13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	CBWD5	Q5RIA9	395 aa		13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	C1orf220	Q5T0J3	134 aa		13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	MARCH8	Q5T0T0	291 aa		13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	TOGARAM2	Q6ZUX3	1019 aa		13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	RRAGA	Q7L523	313 aa		13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	SYN2	Q92777	582 aa	Predicted RBP	13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	ZBTB10	Q96DT7	871 aa		13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	PPP1R13B	Q96KQ4	1090 aa		13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	MAP7D2	Q96T17	732 aa		13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	ACO2	Q99798	780 aa	Known RBP	13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	UPF3A	Q9H1J1	476 aa	Known RBP	13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	FZD8	Q9H461	694 aa		13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	SIX2	Q9NPC8	291 aa		13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	TRMT1	Q9NXH9	659 aa	Known RBP	13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	AGO2	Q9UKV8	859 aa	Known RBP	13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	MYO6	Q9UM54	1294 aa		13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	PLAGL2	Q9UPG8	496 aa		13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	AKT3	Q9Y243	479 aa		13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	PPP2R2C	Q9Y2T4	447 aa		13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480	NRCAM	Q92823	1304 aa		13.81	□□□□□ -0.2
CACNB3-223	ENST00000552480		A0A0B4J269	797 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	GOLGA6L9	A6NEM1	432 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	ZNF233	A6NK53	670 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	ACKR2	O00590	384 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	KPNA6	O60684	536 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	TOM1L1	O75674	476 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	TRPA1	O75762	1119 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	GJB1	P08034	283 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	ACTN1	P12814	892 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	HOXD10	P28358	340 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	GTF2H1	P32780	548 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	MATR3	P43243	847 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	VEGFB	P49765	207 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	GJA9	P57773	515 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	BEX3	Q00994	111 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	CAP1	Q01518	475 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	APBA1	Q02410	837 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	MBTD1	Q05BQ5	628 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	PPP3CA	Q08209	521 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	CETN1	Q12798	172 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	FAM187B	Q17R55	369 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	TRIM65	Q6PJ69	517 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	CCDC170	Q8IYT3	715 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	PARD3B	Q8TEW8	1205 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	LMBR1	Q8WVP7	490 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	CHP1	Q99653	195 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	FAM213A	Q9BRX8	229 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	MSTO1	Q9BUK6	570 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	HAPLN2	Q9GZV7	340 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	INTS2	Q9H0H0	1204 aa	Known RBP	13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	NLRC4	Q9NPP4	1024 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	SETD4	Q9NVD3	440 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	ANKFY1	Q9P2R3	1169 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	SRRD	Q9UH36	339 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	USP20	Q9Y2K6	914 aa		13.8	□□□□□ -0.2
CACNB3-223	ENST00000552480	LRRIQ3	A6PVS8	624 aa	Predicted RBP	13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	SEPT4	O43236	478 aa		13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	ZEB2	O60315	1214 aa		13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	OFD1	O75665	1012 aa		13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	CCDC175	P0C221	793 aa		13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	UCHL3	P15374	230 aa		13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	RFX1	P22670	979 aa		13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	CYLC1	P35663	651 aa	Predicted RBP	13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	GCLM	P48507	274 aa		13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	MXI1	P50539	228 aa		13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	NKX3-2	P78367	333 aa		13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	IRX5	P78411	483 aa	Predicted RBP	13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	PURA	Q00577	322 aa	Known RBP	13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	CACNB2	Q08289	660 aa	Predicted RBP	13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	PSMD6	Q15008	389 aa		13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	EPC2	Q52LR7	807 aa		13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	SFMBT2	Q5VUG0	894 aa		13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	NFRKB	Q6P4R8	1299 aa		13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	TSHZ1	Q6ZSZ6	1077 aa		13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	NYAP1	Q6ZVC0	841 aa		13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	ZNF410	Q86VK4	478 aa		13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	REXO1L1P	Q8IX06	675 aa		13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	EHBP1	Q8NDI1	1231 aa		13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	CD99L2	Q8TCZ2	262 aa		13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	ZBTB45	Q96K62	511 aa	Predicted RBP	13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	DESI2	Q9BSY9	194 aa		13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	IFT122	Q9HBG6	1241 aa		13.79	□□□□□ -0.2
CACNB3-223	ENST00000552480	TMEM8A	Q9HCN3	771 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms