RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 PPIL2Q13356 520 aa15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 TTLL12Q14166 644 aaPredicted RBP15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 NEDD9Q14511 834 aa15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 RPS6KA1Q15418 735 aa15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 SLFN11Q7Z7L1 901 aa15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 GPD1LQ8N335 351 aa15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 SEMA4DQ92854 862 aa15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 KCNN1Q92952 543 aa15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 CEP89Q96ST8 783 aa15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 PCYT2Q99447 389 aa15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 PORCNQ9H237 461 aa15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 LRRC37A2A6NM11 1700 aa15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 NCANO14594 1321 aa15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 KIF4AO95239 1232 aa15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 GABPB1Q06547 395 aaPredicted RBP15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 USP37Q86T82 979 aa15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 MSL3Q8N5Y2 521 aaKnown RBP15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 ZC3H15Q8WU90 426 aaKnown RBP15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 RUBCNQ92622 972 aa15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 TAF4BQ92750 862 aa15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 TMEM143Q96AN5 459 aa15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 BICD1Q96G01 975 aa15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 POP1Q99575 1024 aaKnown RBP15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 SYT17Q9BSW7 474 aa15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 LRRC1Q9BTT6 524 aa15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 R3HDMLQ9H3Y0 253 aa15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 SUGCTQ9HAC7 445 aa15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 NRBP2Q9NSY0 501 aa15.17■□□□□ 0.02
RAB3IP-216ENST00000552199 TMCO5BA8MYB1 307 aa15.16■□□□□ 0.02
RAB3IP-216ENST00000552199 SCP2P22307 547 aa15.16■□□□□ 0.02
RAB3IP-216ENST00000552199 ARL2P36404 184 aa15.16■□□□□ 0.02
RAB3IP-216ENST00000552199 MATR3P43243 847 aaKnown RBP eCLIP15.16■□□□□ 0.02
RAB3IP-216ENST00000552199 NAMPTP43490 491 aa15.16■□□□□ 0.02
RAB3IP-216ENST00000552199 DNA2P51530 1060 aa15.16■□□□□ 0.02
RAB3IP-216ENST00000552199 GPC3P51654 580 aa15.16■□□□□ 0.02
RAB3IP-216ENST00000552199 MOGSQ13724 837 aa15.16■□□□□ 0.02
RAB3IP-216ENST00000552199 SMC1AQ14683 1233 aaKnown RBP15.16■□□□□ 0.02
RAB3IP-216ENST00000552199 MAP9Q49MG5 647 aa15.16■□□□□ 0.02
RAB3IP-216ENST00000552199 DPY19L2Q6NUT2 758 aa15.16■□□□□ 0.02
RAB3IP-216ENST00000552199 CCNI2Q6ZMN8 369 aaPredicted RBP15.16■□□□□ 0.02
RAB3IP-216ENST00000552199 ASAP3Q8TDY4 903 aa15.16■□□□□ 0.02
RAB3IP-216ENST00000552199 KAT5Q92993 513 aa15.16■□□□□ 0.02
RAB3IP-216ENST00000552199 L3MBTL3Q96JM7 780 aaPredicted RBP15.16■□□□□ 0.02
RAB3IP-216ENST00000552199 ST7Q9NRC1 585 aa15.16■□□□□ 0.02
RAB3IP-216ENST00000552199 RBM12Q9NTZ6 932 aaKnown RBP15.16■□□□□ 0.02
RAB3IP-216ENST00000552199 RBPJLQ9UBG7 517 aa15.16■□□□□ 0.02
RAB3IP-216ENST00000552199 GLRA2P23416 452 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 EPHX2P34913 555 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 COPB2P35606 906 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 RFC5P40937 340 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 LIG4P49917 911 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 MFAP3P55082 362 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 STRN3Q13033 797 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 TARBP2Q15633 366 aaKnown RBP15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 FAM160B1Q5W0V3 765 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 FAM71AQ8IYT1 594 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 SYCE1Q8N0S2 351 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 FBXL13Q8NEE6 735 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 AFAP1L1Q8TED9 768 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 SLC20A1Q8WUM9 679 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 SLC7A3Q8WY07 619 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 CTNNBL1Q8WYA6 563 aaPredicted RBP15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 SEPT1Q8WYJ6 367 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 RFFLQ8WZ73 363 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 OPTNQ96CV9 577 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 PBKQ96KB5 322 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 KREMEN1Q96MU8 473 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 FAM213AQ9BRX8 229 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 GOLPH3Q9H4A6 298 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 KIAA1586Q9HCI6 787 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 TXNRD2Q9NNW7 524 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 TOPORSQ9NS56 1045 aaPredicted RBP15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 SEPT11Q9NVA2 429 aaKnown RBP15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 TAS2R14Q9NYV8 317 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 STXBP5LQ9Y2K9 1186 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 STYXL1Q9Y6J8 313 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 SIP14410 1827 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 ANKRD62A6NC57 917 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 ZNF233A6NK53 670 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 TULP1O00294 542 aaPredicted RBP15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 SOCS7O14512 581 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 EXTL3O43909 919 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 ZMYND10O75800 440 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 GGPS1O95749 300 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 OSBPP22059 807 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 STAT5BP51692 787 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 CASP8Q14790 479 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 Q3C1V9 767 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 GLE1Q53GS7 698 aaKnown RBP15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 FASTKD5Q7L8L6 764 aaKnown RBP15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 PPM1KQ8N3J5 372 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 SLC35G2Q8TBE7 412 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 MPHOSPH6Q99547 160 aaKnown RBP15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 PRDM10Q9NQV6 1147 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 RAB20Q9NX57 234 aa15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 SUCLA2Q9P2R7 463 aaPredicted RBP15.15■□□□□ 0.02
RAB3IP-216ENST00000552199 KCNK3O14649 394 aa15.14■□□□□ 0.01
RAB3IP-216ENST00000552199 SGPL1O95470 568 aa15.14■□□□□ 0.01
RAB3IP-216ENST00000552199 PIGRP01833 764 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms