RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 FOXD4L4Q8WXT5 416 aaPredicted RBP6.53□□□□□ -1.36
CCDC65-204ENST00000552188 PPP2R3CQ969Q6 453 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 ZNF689Q96CS4 500 aaPredicted RBP6.53□□□□□ -1.36
CCDC65-204ENST00000552188 MRPL38Q96DV4 380 aaKnown RBP6.53□□□□□ -1.36
CCDC65-204ENST00000552188 AK8Q96MA6 479 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 ZNF396Q96N95 335 aaPredicted RBP6.53□□□□□ -1.36
CCDC65-204ENST00000552188 FAM193BQ96PV7 902 aaPredicted RBP6.53□□□□□ -1.36
CCDC65-204ENST00000552188 PLIN2Q99541 437 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 PLVAPQ9BX97 442 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 MRPL9Q9BYD2 267 aaKnown RBP6.53□□□□□ -1.36
CCDC65-204ENST00000552188 TMEM117Q9H0C3 514 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 LMAN2LQ9H0V9 348 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 C2orf40Q9H1Z8 148 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 IFT122Q9HBG6 1241 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 XPNPEP1Q9NQW7 623 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 FAM105AQ9NUU6 356 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 THEGQ9P2T0 379 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 CCDC39Q9UFE4 941 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 PUF60Q9UHX1 559 aaKnown RBP6.53□□□□□ -1.36
CCDC65-204ENST00000552188 INPP5FQ9Y2H2 1132 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 MTCH2Q9Y6C9 303 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 MRPL42Q9Y6G3 142 aaKnown RBP6.53□□□□□ -1.36
CCDC65-204ENST00000552188 CITO14578 2027 aa6.53□□□□□ -1.36
CCDC65-204ENST00000552188 SZT2Q5T011 3432 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 A0A0U1RQF3 1178 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 EPOPA6NHQ4 379 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 CCDC169A6NNP5 214 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 NR1I2O75469 434 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 EYA4O95677 639 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 ITGA4P13612 1032 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 LAG3P18627 525 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 CYP11B2P19099 503 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 POU3F3P20264 500 aaPredicted RBP6.52□□□□□ -1.37
CCDC65-204ENST00000552188 GLRA2P23416 452 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 ARL2P36404 184 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 LONP1P36776 959 aaKnown RBP6.52□□□□□ -1.37
CCDC65-204ENST00000552188 SMTNP53814 917 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 PTENP60484 403 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 COPS2P61201 443 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 FAM189BP81408 668 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 KRT17Q04695 432 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 POU5F1BQ06416 359 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 CAPSQ13938 189 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 BECN1Q14457 450 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 DHX8Q14562 1220 aaKnown RBP6.52□□□□□ -1.37
CCDC65-204ENST00000552188 ECM1Q16610 540 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 MAPK6Q16659 721 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 AAK1Q2M2I8 961 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 TIGD5Q53EQ6 642 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 NAALADL2Q58DX5 795 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 LRRC43Q8N309 656 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 TMEM87AQ8NBN3 555 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 ASAP3Q8TDY4 903 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 SYMPKQ92797 1274 aaKnown RBP6.52□□□□□ -1.37
CCDC65-204ENST00000552188 KIFAP3Q92845 792 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 LPPQ93052 612 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 P2RX5Q93086 422 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 CCDC51Q96ER9 411 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 CPB2Q96IY4 423 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 DRC1Q96MC2 740 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 ZNF558Q96NG5 402 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 ADPGKQ9BRR6 497 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 APOL6Q9BWW8 343 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 GBP3Q9H0R5 595 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 ALG13Q9NP73 1137 aaKnown RBP6.52□□□□□ -1.37
CCDC65-204ENST00000552188 UBN1Q9NPG3 1134 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 GPRC5CQ9NQ84 441 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 AGPAT5Q9NUQ2 364 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 TYW1Q9NV66 732 aaKnown RBP6.52□□□□□ -1.37
CCDC65-204ENST00000552188 PRMT7Q9NVM4 692 aaPredicted RBP6.52□□□□□ -1.37
CCDC65-204ENST00000552188 KCNG1Q9UIX4 513 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 PCDHB3Q9Y5E6 796 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 PCDHB2Q9Y5E7 798 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 TCHHQ07283 1943 aa6.52□□□□□ -1.37
CCDC65-204ENST00000552188 PHLPP2Q6ZVD8 1323 aa6.51□□□□□ -1.37
CCDC65-204ENST00000552188 CARNS1A5YM72 827 aa6.51□□□□□ -1.37
CCDC65-204ENST00000552188 K7ERI5 159 aa6.51□□□□□ -1.37
CCDC65-204ENST00000552188 N4BP3O15049 544 aa6.51□□□□□ -1.37
CCDC65-204ENST00000552188 GRM6O15303 877 aa6.51□□□□□ -1.37
CCDC65-204ENST00000552188 SLC26A4O43511 780 aa6.51□□□□□ -1.37
CCDC65-204ENST00000552188 ACTN4O43707 911 aaKnown RBP6.51□□□□□ -1.37
CCDC65-204ENST00000552188 TSPAN1O60635 241 aa6.51□□□□□ -1.37
CCDC65-204ENST00000552188 NPTXRO95502 500 aa6.51□□□□□ -1.37
CCDC65-204ENST00000552188 PRKCBP05771 671 aa6.51□□□□□ -1.37
CCDC65-204ENST00000552188 PLA2G4BP0C869 781 aa6.51□□□□□ -1.37
CCDC65-204ENST00000552188 MARCKSP29966 332 aaPredicted RBP6.51□□□□□ -1.37
CCDC65-204ENST00000552188 PPM1AP35813 382 aa6.51□□□□□ -1.37
CCDC65-204ENST00000552188 MATR3P43243 847 aaKnown RBP eCLIP6.51□□□□□ -1.37
CCDC65-204ENST00000552188 NAMPTP43490 491 aa6.51□□□□□ -1.37
CCDC65-204ENST00000552188 ALDH7A1P49419 539 aaKnown RBP6.51□□□□□ -1.37
CCDC65-204ENST00000552188 EFNA5P52803 228 aa6.51□□□□□ -1.37
CCDC65-204ENST00000552188 PEX3P56589 373 aa6.51□□□□□ -1.37
CCDC65-204ENST00000552188 MRPS5P82675 430 aaKnown RBP6.51□□□□□ -1.37
CCDC65-204ENST00000552188 MBTD1Q05BQ5 628 aa6.51□□□□□ -1.37
CCDC65-204ENST00000552188 RAD51AP2Q09MP3 1159 aa6.51□□□□□ -1.37
CCDC65-204ENST00000552188 RESTQ13127 1097 aa6.51□□□□□ -1.37
CCDC65-204ENST00000552188 DMP1Q13316 513 aaPredicted RBP6.51□□□□□ -1.37
CCDC65-204ENST00000552188 PRPF4BQ13523 1007 aaKnown RBP6.51□□□□□ -1.37
CCDC65-204ENST00000552188 IL17AQ16552 155 aa6.51□□□□□ -1.37
CCDC65-204ENST00000552188 NOMO2Q5JPE7 1267 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms