RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 ADPGKQ9BRR6 497 aa20.51■□□□□ 0.87
DDX54-209ENST00000551912 TRIM6Q9C030 488 aaPredicted RBP20.51■□□□□ 0.87
DDX54-209ENST00000551912 PDZD7Q9H5P4 517 aa20.51■□□□□ 0.87
DDX54-209ENST00000551912 TBC1D7Q9P0N9 293 aa20.51■□□□□ 0.87
DDX54-209ENST00000551912 USP20Q9Y2K6 914 aa20.51■□□□□ 0.87
DDX54-209ENST00000551912 YBX2Q9Y2T7 364 aaKnown RBP20.51■□□□□ 0.87
DDX54-209ENST00000551912 PVALEFA0A1B0GWK0 134 aa20.5■□□□□ 0.87
DDX54-209ENST00000551912 GTPBP6O43824 516 aaPredicted RBP20.5■□□□□ 0.87
DDX54-209ENST00000551912 DGKIO75912 1065 aa20.5■□□□□ 0.87
DDX54-209ENST00000551912 MYOGP15173 224 aa20.5■□□□□ 0.87
DDX54-209ENST00000551912 ZNF598Q86UK7 904 aaKnown RBP20.5■□□□□ 0.87
DDX54-209ENST00000551912 CDR2LQ86X02 465 aaPredicted RBP20.5■□□□□ 0.87
DDX54-209ENST00000551912 TIFAQ96CG3 184 aa20.5■□□□□ 0.87
DDX54-209ENST00000551912 ACO2Q99798 780 aaKnown RBP20.5■□□□□ 0.87
DDX54-209ENST00000551912 TARS2Q9BW92 718 aaKnown RBP20.5■□□□□ 0.87
DDX54-209ENST00000551912 EIF2AQ9BY44 585 aaKnown RBP20.5■□□□□ 0.87
DDX54-209ENST00000551912 TBX20Q9UMR3 447 aa20.5■□□□□ 0.87
DDX54-209ENST00000551912 HOXA2O43364 376 aa20.49■□□□□ 0.87
DDX54-209ENST00000551912 NR1I2O75469 434 aa20.49■□□□□ 0.87
DDX54-209ENST00000551912 NPTXRO95502 500 aa20.49■□□□□ 0.87
DDX54-209ENST00000551912 ATF7P17544 494 aaPredicted RBP20.49■□□□□ 0.87
DDX54-209ENST00000551912 ZC2HC1CQ53FD0 456 aaPredicted RBP20.49■□□□□ 0.87
DDX54-209ENST00000551912 HVCN1Q96D96 273 aa20.49■□□□□ 0.87
DDX54-209ENST00000551912 PGBD4Q96DM1 585 aa20.49■□□□□ 0.87
DDX54-209ENST00000551912 BICD1Q96G01 975 aa20.49■□□□□ 0.87
DDX54-209ENST00000551912 LRCH3Q96II8 777 aa20.49■□□□□ 0.87
DDX54-209ENST00000551912 TNFSF13BQ9Y275 285 aa20.49■□□□□ 0.87
DDX54-209ENST00000551912 GBF1Q92538 1859 aa20.49■□□□□ 0.87
DDX54-209ENST00000551912 GCNT3O95395 438 aa20.48■□□□□ 0.87
DDX54-209ENST00000551912 CA3P07451 260 aa20.48■□□□□ 0.87
DDX54-209ENST00000551912 FGFR1P11362 822 aa20.48■□□□□ 0.87
DDX54-209ENST00000551912 ALCAMQ13740 583 aa20.48■□□□□ 0.87
DDX54-209ENST00000551912 EEF1DP3Q658K8 133 aa20.48■□□□□ 0.87
DDX54-209ENST00000551912 ZPBP2Q6X784 338 aa20.48■□□□□ 0.87
DDX54-209ENST00000551912 APBB1IPQ7Z5R6 666 aaPredicted RBP20.48■□□□□ 0.87
DDX54-209ENST00000551912 MRPL10Q7Z7H8 261 aaKnown RBP20.48■□□□□ 0.87
DDX54-209ENST00000551912 HACE1Q8IYU2 909 aa20.48■□□□□ 0.87
DDX54-209ENST00000551912 ZNF689Q96CS4 500 aaPredicted RBP20.48■□□□□ 0.87
DDX54-209ENST00000551912 TIGD1Q96MW7 591 aa20.48■□□□□ 0.87
DDX54-209ENST00000551912 NKX2-4Q9H2Z4 354 aa20.48■□□□□ 0.87
DDX54-209ENST00000551912 RC3H2Q9HBD1 1191 aaKnown RBP20.48■□□□□ 0.87
DDX54-209ENST00000551912 IPPQ9Y573 584 aa20.48■□□□□ 0.87
DDX54-209ENST00000551912 PCDHB13Q9Y5F0 798 aa20.48■□□□□ 0.87
DDX54-209ENST00000551912 LCHNA4D1U4 455 aa20.47■□□□□ 0.87
DDX54-209ENST00000551912 KINO60870 393 aaKnown RBP20.47■□□□□ 0.87
DDX54-209ENST00000551912 PPP1R37O75864 691 aa20.47■□□□□ 0.87
DDX54-209ENST00000551912 PRR29P0C7W0 189 aa20.47■□□□□ 0.87
DDX54-209ENST00000551912 GATMP50440 423 aa20.47■□□□□ 0.87
DDX54-209ENST00000551912 FXR1P51114 621 aaKnown RBP eCLIP20.47■□□□□ 0.87
DDX54-209ENST00000551912 DCAF4L1Q3SXM0 396 aa20.47■□□□□ 0.87
DDX54-209ENST00000551912 FAM26FQ5R3K3 315 aa20.47■□□□□ 0.87
DDX54-209ENST00000551912 STXBP4Q6ZWJ1 553 aa20.47■□□□□ 0.87
DDX54-209ENST00000551912 MAP4K3Q8IVH8 894 aa20.47■□□□□ 0.87
DDX54-209ENST00000551912 ABI1Q8IZP0 508 aa20.47■□□□□ 0.87
DDX54-209ENST00000551912 SMG8Q8ND04 991 aaKnown RBP20.47■□□□□ 0.87
DDX54-209ENST00000551912 SP7Q8TDD2 431 aaPredicted RBP20.47■□□□□ 0.87
DDX54-209ENST00000551912 LPPQ93052 612 aa20.47■□□□□ 0.87
DDX54-209ENST00000551912 HPS3Q969F9 1004 aa20.47■□□□□ 0.87
DDX54-209ENST00000551912 TCHPQ9BT92 498 aa20.47■□□□□ 0.87
DDX54-209ENST00000551912 STRA6Q9BX79 667 aa20.47■□□□□ 0.87
DDX54-209ENST00000551912 SLC28A3Q9HAS3 691 aa20.47■□□□□ 0.87
DDX54-209ENST00000551912 PTPRHQ9HD43 1115 aa20.47■□□□□ 0.87
DDX54-209ENST00000551912 TBKBP1A7MCY6 615 aa20.46■□□□□ 0.87
DDX54-209ENST00000551912 HNRNPDLO14979 420 aaKnown RBP20.46■□□□□ 0.87
DDX54-209ENST00000551912 KLRC4O43908 158 aa20.46■□□□□ 0.87
DDX54-209ENST00000551912 TOM1L1O75674 476 aa20.46■□□□□ 0.87
DDX54-209ENST00000551912 RPN1P04843 607 aaKnown RBP20.46■□□□□ 0.87
DDX54-209ENST00000551912 MYBP10242 640 aa20.46■□□□□ 0.87
DDX54-209ENST00000551912 ITGA4P13612 1032 aa20.46■□□□□ 0.87
DDX54-209ENST00000551912 LIG4P49917 911 aa20.46■□□□□ 0.87
DDX54-209ENST00000551912 CASP5P51878 434 aa20.46■□□□□ 0.87
DDX54-209ENST00000551912 EHHADHQ08426 723 aa20.46■□□□□ 0.87
DDX54-209ENST00000551912 DPYDQ12882 1025 aa20.46■□□□□ 0.87
DDX54-209ENST00000551912 BTG3Q14201 252 aaPredicted RBP20.46■□□□□ 0.87
DDX54-209ENST00000551912 POSTNQ15063 836 aa20.46■□□□□ 0.87
DDX54-209ENST00000551912 ZNF568Q3ZCX4 644 aa20.46■□□□□ 0.87
DDX54-209ENST00000551912 L1TD1Q5T7N2 865 aaKnown RBP20.46■□□□□ 0.87
DDX54-209ENST00000551912 PPP2R2DQ66LE6 453 aa20.46■□□□□ 0.87
DDX54-209ENST00000551912 MPZL3Q6UWV2 235 aa20.46■□□□□ 0.87
DDX54-209ENST00000551912 CMTR2Q8IYT2 770 aaKnown RBP20.46■□□□□ 0.87
DDX54-209ENST00000551912 TMEM117Q9H0C3 514 aa20.46■□□□□ 0.87
DDX54-209ENST00000551912 NXF3Q9H4D5 531 aaKnown RBP20.46■□□□□ 0.87
DDX54-209ENST00000551912 UBN1Q9NPG3 1134 aa20.46■□□□□ 0.87
DDX54-209ENST00000551912 RNF19AQ9NV58 838 aa20.46■□□□□ 0.87
DDX54-209ENST00000551912 EXOC1Q9NV70 894 aa20.46■□□□□ 0.87
DDX54-209ENST00000551912 HOOK1Q9UJC3 728 aaKnown RBP20.46■□□□□ 0.87
DDX54-209ENST00000551912 HES2Q9Y543 173 aa20.46■□□□□ 0.87
DDX54-209ENST00000551912 TMEM265A0A087WTH1 108 aa20.45■□□□□ 0.86
DDX54-209ENST00000551912 MEIS3P2A8K0S8 358 aa20.45■□□□□ 0.86
DDX54-209ENST00000551912 GOLGA6L22H0YM25 854 aa20.45■□□□□ 0.86
DDX54-209ENST00000551912 PIGRP01833 764 aa20.45■□□□□ 0.86
DDX54-209ENST00000551912 PROZP22891 400 aa20.45■□□□□ 0.86
DDX54-209ENST00000551912 KMT5BQ4FZB7 885 aa20.45■□□□□ 0.86
DDX54-209ENST00000551912 PAN2Q504Q3 1202 aaKnown RBP20.45■□□□□ 0.86
DDX54-209ENST00000551912 CLLU1OSQ5K130 101 aa20.45■□□□□ 0.86
DDX54-209ENST00000551912 GPR153Q6NV75 609 aa20.45■□□□□ 0.86
DDX54-209ENST00000551912 GLB1LQ6UWU2 654 aa20.45■□□□□ 0.86
DDX54-209ENST00000551912 AGMOQ6ZNB7 445 aa20.45■□□□□ 0.86
DDX54-209ENST00000551912 FIBCD1Q8N539 461 aa20.45■□□□□ 0.86
DDX54-209ENST00000551912 RSPH1Q8WYR4 309 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms