RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 FCARP24071 287 aa15.32■□□□□ 0.04
SNRPF-203ENST00000551316 RAP1GAPP47736 663 aa15.32■□□□□ 0.04
SNRPF-203ENST00000551316 CXCL12P48061 93 aa15.32■□□□□ 0.04
SNRPF-203ENST00000551316 GPC3P51654 580 aa15.32■□□□□ 0.04
SNRPF-203ENST00000551316 GRM4Q14833 912 aa15.32■□□□□ 0.04
SNRPF-203ENST00000551316 GLB1LQ6UWU2 654 aa15.32■□□□□ 0.04
SNRPF-203ENST00000551316 AGMOQ6ZNB7 445 aa15.32■□□□□ 0.04
SNRPF-203ENST00000551316 AKT3Q9Y243 479 aa15.32■□□□□ 0.04
SNRPF-203ENST00000551316 PLXNB3Q9ULL4 1909 aa15.32■□□□□ 0.04
SNRPF-203ENST00000551316 TTC41PQ6P2S7 1318 aa15.32■□□□□ 0.04
SNRPF-203ENST00000551316 CCL16O15467 120 aa15.31■□□□□ 0.04
SNRPF-203ENST00000551316 GAS2O43903 313 aaKnown RBP15.31■□□□□ 0.04
SNRPF-203ENST00000551316 MPLP40238 635 aa15.31■□□□□ 0.04
SNRPF-203ENST00000551316 TROAPQ12815 778 aa15.31■□□□□ 0.04
SNRPF-203ENST00000551316 NMIQ13287 307 aaPredicted RBP15.31■□□□□ 0.04
SNRPF-203ENST00000551316 DRP2Q13474 957 aa15.31■□□□□ 0.04
SNRPF-203ENST00000551316 ZNF484Q5JVG2 852 aa15.31■□□□□ 0.04
SNRPF-203ENST00000551316 LARP1BQ659C4 914 aaKnown RBP15.31■□□□□ 0.04
SNRPF-203ENST00000551316 ABHD15Q6UXT9 468 aa15.31■□□□□ 0.04
SNRPF-203ENST00000551316 PLEKHA4Q9H4M7 779 aa15.31■□□□□ 0.04
SNRPF-203ENST00000551316 HELLSQ9NRZ9 838 aa15.31■□□□□ 0.04
SNRPF-203ENST00000551316 NEUROG3Q9Y4Z2 214 aa15.31■□□□□ 0.04
SNRPF-203ENST00000551316 ACACAQ13085 2346 aa15.31■□□□□ 0.04
SNRPF-203ENST00000551316 NFASCO94856 1347 aa15.3■□□□□ 0.04
SNRPF-203ENST00000551316 PXNP49023 591 aaPredicted RBP15.3■□□□□ 0.04
SNRPF-203ENST00000551316 DSG1Q02413 1049 aa15.3■□□□□ 0.04
SNRPF-203ENST00000551316 SLC5A9Q2M3M2 681 aa15.3■□□□□ 0.04
SNRPF-203ENST00000551316 IFIT1BQ5T764 474 aaKnown RBP15.3■□□□□ 0.04
SNRPF-203ENST00000551316 TANGO2Q6ICL3 276 aa15.3■□□□□ 0.04
SNRPF-203ENST00000551316 CYB5R4Q7L1T6 521 aa15.3■□□□□ 0.04
SNRPF-203ENST00000551316 SHROOM3Q8TF72 1996 aa15.3■□□□□ 0.04
SNRPF-203ENST00000551316 HDAC7Q8WUI4 952 aa15.3■□□□□ 0.04
SNRPF-203ENST00000551316 CRELD1Q96HD1 420 aa15.3■□□□□ 0.04
SNRPF-203ENST00000551316 MBOAT7Q96N66 472 aa15.3■□□□□ 0.04
SNRPF-203ENST00000551316 SALL3Q9BXA9 1300 aa15.3■□□□□ 0.04
SNRPF-203ENST00000551316 RNF41Q9H4P4 317 aaPredicted RBP15.3■□□□□ 0.04
SNRPF-203ENST00000551316 FBXW11Q9UKB1 542 aa15.3■□□□□ 0.04
SNRPF-203ENST00000551316 MRPS17Q9Y2R5 130 aaKnown RBP15.3■□□□□ 0.04
SNRPF-203ENST00000551316 ATG2BQ96BY7 2078 aa15.29■□□□□ 0.04
SNRPF-203ENST00000551316 BACH1O14867 736 aa15.29■□□□□ 0.04
SNRPF-203ENST00000551316 POMCP01189 267 aa15.29■□□□□ 0.04
SNRPF-203ENST00000551316 CNR2P34972 360 aa15.29■□□□□ 0.04
SNRPF-203ENST00000551316 PPP2R5DQ14738 602 aa15.29■□□□□ 0.04
SNRPF-203ENST00000551316 PDXDC2PQ6P474 469 aa15.29■□□□□ 0.04
SNRPF-203ENST00000551316 TNPO1Q92973 898 aaKnown RBP15.29■□□□□ 0.04
SNRPF-203ENST00000551316 PGBD1Q96JS3 809 aa15.29■□□□□ 0.04
SNRPF-203ENST00000551316 FAM105AQ9NUU6 356 aa15.29■□□□□ 0.04
SNRPF-203ENST00000551316 ANKFY1Q9P2R3 1169 aa15.29■□□□□ 0.04
SNRPF-203ENST00000551316 FAN1Q9Y2M0 1017 aa15.29■□□□□ 0.04
SNRPF-203ENST00000551316 MSRB2Q9Y3D2 182 aa15.29■□□□□ 0.04
SNRPF-203ENST00000551316 LNP1A1A4G5 178 aa15.28■□□□□ 0.04
SNRPF-203ENST00000551316 ECI2O75521 394 aa15.28■□□□□ 0.04
SNRPF-203ENST00000551316 PAPSS2O95340 614 aaPredicted RBP15.28■□□□□ 0.04
SNRPF-203ENST00000551316 SLC26A2P50443 739 aa15.28■□□□□ 0.04
SNRPF-203ENST00000551316 MCMDC2Q4G0Z9 681 aa15.28■□□□□ 0.04
SNRPF-203ENST00000551316 TWF2Q6IBS0 349 aaKnown RBP15.28■□□□□ 0.04
SNRPF-203ENST00000551316 EFCAB12Q6NXP0 572 aa15.28■□□□□ 0.04
SNRPF-203ENST00000551316 PRSS55Q6UWB4 352 aaPredicted RBP15.28■□□□□ 0.04
SNRPF-203ENST00000551316 WDR5BQ86VZ2 330 aa15.28■□□□□ 0.04
SNRPF-203ENST00000551316 DEFB124Q8NES8 71 aa15.28■□□□□ 0.04
SNRPF-203ENST00000551316 FAM3CQ92520 227 aa15.28■□□□□ 0.04
SNRPF-203ENST00000551316 DNASE1L2Q92874 299 aa15.28■□□□□ 0.04
SNRPF-203ENST00000551316 MCRS1Q96EZ8 462 aa15.28■□□□□ 0.04
SNRPF-203ENST00000551316 IER2Q9BTL4 223 aa15.28■□□□□ 0.04
SNRPF-203ENST00000551316 GPR62Q9BZJ7 368 aa15.28■□□□□ 0.04
SNRPF-203ENST00000551316 AGO4Q9HCK5 861 aaKnown RBP15.28■□□□□ 0.04
SNRPF-203ENST00000551316 ZNF302Q9NR11 478 aa15.28■□□□□ 0.04
SNRPF-203ENST00000551316 CHST7Q9NS84 486 aa15.28■□□□□ 0.04
SNRPF-203ENST00000551316 DACT1Q9NYF0 836 aa15.28■□□□□ 0.04
SNRPF-203ENST00000551316 KIAA1549LQ6ZVL6 1849 aa15.28■□□□□ 0.04
SNRPF-203ENST00000551316 TNRC6BQ9UPQ9 1833 aaKnown RBP15.27■□□□□ 0.04
SNRPF-203ENST00000551316 PCNX2A6NKB5 2137 aa15.27■□□□□ 0.04
SNRPF-203ENST00000551316 CEBPBP17676 345 aa15.27■□□□□ 0.04
SNRPF-203ENST00000551316 PTGDRQ13258 359 aa15.27■□□□□ 0.04
SNRPF-203ENST00000551316 PKN3Q6P5Z2 889 aa15.27■□□□□ 0.04
SNRPF-203ENST00000551316 COLGALT2Q8IYK4 626 aa15.27■□□□□ 0.04
SNRPF-203ENST00000551316 SPEM1Q8N4L4 309 aa15.27■□□□□ 0.04
SNRPF-203ENST00000551316 MXRA8Q9BRK3 442 aa15.27■□□□□ 0.04
SNRPF-203ENST00000551316 TMEM175Q9BSA9 504 aa15.27■□□□□ 0.04
SNRPF-203ENST00000551316 TRAIPQ9BWF2 469 aa15.27■□□□□ 0.04
SNRPF-203ENST00000551316 DNMT3BQ9UBC3 853 aaKnown RBP15.27■□□□□ 0.04
SNRPF-203ENST00000551316 CACNG4Q9UBN1 327 aa15.27■□□□□ 0.04
SNRPF-203ENST00000551316 DPP7Q9UHL4 492 aa15.27■□□□□ 0.04
SNRPF-203ENST00000551316 POLIQ9UNA4 740 aa15.27■□□□□ 0.04
SNRPF-203ENST00000551316 PIN4Q9Y237 131 aaKnown RBP15.27■□□□□ 0.04
SNRPF-203ENST00000551316 PIAS3Q9Y6X2 628 aa15.27■□□□□ 0.04
SNRPF-203ENST00000551316 MYO16Q9Y6X6 1858 aa15.27■□□□□ 0.03
SNRPF-203ENST00000551316 ASXL3Q9C0F0 2248 aa15.27■□□□□ 0.03
SNRPF-203ENST00000551316 ADAMTS9Q9P2N4 1935 aa15.26■□□□□ 0.03
SNRPF-203ENST00000551316 ADAM12O43184 909 aa15.26■□□□□ 0.03
SNRPF-203ENST00000551316 PLA2G2AP14555 144 aa15.26■□□□□ 0.03
SNRPF-203ENST00000551316 SOX9P48436 509 aa15.26■□□□□ 0.03
SNRPF-203ENST00000551316 CCDC178Q5BJE1 867 aa15.26■□□□□ 0.03
SNRPF-203ENST00000551316 SWSAP1Q6NVH7 229 aa15.26■□□□□ 0.03
SNRPF-203ENST00000551316 ELMSAN1Q6PJG2 1045 aa15.26■□□□□ 0.03
SNRPF-203ENST00000551316 GAB3Q8WWW8 586 aa15.26■□□□□ 0.03
SNRPF-203ENST00000551316 RABGGTAQ92696 567 aa15.26■□□□□ 0.03
SNRPF-203ENST00000551316 CUL5Q93034 780 aa15.26■□□□□ 0.03
SNRPF-203ENST00000551316 SDF4Q9BRK5 362 aa15.26■□□□□ 0.03
SNRPF-203ENST00000551316 DDX19BQ9UMR2 479 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms