RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 ITGB2P05107 769 aa6.6□□□□□ -1.35
CPSF6-206ENST00000550987 ENO2P09104 434 aaPredicted RBP6.6□□□□□ -1.35
CPSF6-206ENST00000550987 SDHBP21912 280 aa6.6□□□□□ -1.35
CPSF6-206ENST00000550987 XPAP23025 273 aaPredicted RBP6.6□□□□□ -1.35
CPSF6-206ENST00000550987 PTGS1P23219 599 aa6.6□□□□□ -1.35
CPSF6-206ENST00000550987 RGS3P49796 1198 aa6.6□□□□□ -1.35
CPSF6-206ENST00000550987 PRR5P85299 388 aa6.6□□□□□ -1.35
CPSF6-206ENST00000550987 MYBPC3Q14896 1274 aa6.6□□□□□ -1.35
CPSF6-206ENST00000550987 UNQ6494/PRO21346Q6UXR6 183 aa6.6□□□□□ -1.35
CPSF6-206ENST00000550987 USP45Q70EL2 814 aa6.6□□□□□ -1.35
CPSF6-206ENST00000550987 TP53INP2Q8IXH6 220 aa6.6□□□□□ -1.35
CPSF6-206ENST00000550987 OR14C36Q8NHC7 312 aa6.6□□□□□ -1.35
CPSF6-206ENST00000550987 MVB12AQ96EY5 273 aa6.6□□□□□ -1.35
CPSF6-206ENST00000550987 SLC39A13Q96H72 371 aa6.6□□□□□ -1.35
CPSF6-206ENST00000550987 ELAC2Q9BQ52 826 aaKnown RBP6.6□□□□□ -1.35
CPSF6-206ENST00000550987 SEMA6BQ9H3T3 888 aa6.6□□□□□ -1.35
CPSF6-206ENST00000550987 SLC39A2Q9NP94 309 aa6.6□□□□□ -1.35
CPSF6-206ENST00000550987 DTLQ9NZJ0 730 aa6.6□□□□□ -1.35
CPSF6-206ENST00000550987 TUBD1Q9UJT1 453 aa6.6□□□□□ -1.35
CPSF6-206ENST00000550987 INO80Q9ULG1 1556 aaPredicted RBP6.6□□□□□ -1.35
CPSF6-206ENST00000550987 ERVK-7P63135 1459 aa6.6□□□□□ -1.35
CPSF6-206ENST00000550987 TRIOBPQ9H2D6 2365 aa6.59□□□□□ -1.35
CPSF6-206ENST00000550987 NRXN3Q9Y4C0 1643 aa6.59□□□□□ -1.35
CPSF6-206ENST00000550987 NFIBO00712 420 aa6.59□□□□□ -1.35
CPSF6-206ENST00000550987 CREB3O43889 395 aa6.59□□□□□ -1.35
CPSF6-206ENST00000550987 EFEMP2O95967 443 aa6.59□□□□□ -1.35
CPSF6-206ENST00000550987 SSTR4P31391 388 aa6.59□□□□□ -1.35
CPSF6-206ENST00000550987 MC4RP32245 332 aa6.59□□□□□ -1.35
CPSF6-206ENST00000550987 PDE6BP35913 854 aa6.59□□□□□ -1.35
CPSF6-206ENST00000550987 PPARAQ07869 468 aa6.59□□□□□ -1.35
CPSF6-206ENST00000550987 TMEM62Q0P6H9 643 aa6.59□□□□□ -1.35
CPSF6-206ENST00000550987 MORC3Q14149 939 aa6.59□□□□□ -1.35
CPSF6-206ENST00000550987 TRIM25Q14258 630 aaKnown RBP6.59□□□□□ -1.35
CPSF6-206ENST00000550987 NOLC1Q14978 699 aaKnown RBP eCLIP6.59□□□□□ -1.35
CPSF6-206ENST00000550987 SLC15A2Q16348 729 aa6.59□□□□□ -1.35
CPSF6-206ENST00000550987 PGS1Q32NB8 556 aa6.59□□□□□ -1.35
CPSF6-206ENST00000550987 CCDC157Q569K6 752 aa6.59□□□□□ -1.35
CPSF6-206ENST00000550987 ADGRF1Q5T601 910 aa6.59□□□□□ -1.35
CPSF6-206ENST00000550987 CHST15Q7LFX5 561 aaPredicted RBP6.59□□□□□ -1.35
CPSF6-206ENST00000550987 ACRBPQ8NEB7 543 aa6.59□□□□□ -1.35
CPSF6-206ENST00000550987 ABHD4Q8TB40 342 aa6.59□□□□□ -1.35
CPSF6-206ENST00000550987 TNFRSF12AQ9NP84 129 aa6.59□□□□□ -1.35
CPSF6-206ENST00000550987 INCENPQ9NQS7 918 aa6.59□□□□□ -1.35
CPSF6-206ENST00000550987 DDX21Q9NR30 783 aaKnown RBP eCLIP6.59□□□□□ -1.35
CPSF6-206ENST00000550987 BTBD7Q9P203 1132 aa6.59□□□□□ -1.35
CPSF6-206ENST00000550987 PUF60Q9UHX1 559 aaKnown RBP6.59□□□□□ -1.35
CPSF6-206ENST00000550987 PRSS50Q9UI38 385 aa6.59□□□□□ -1.35
CPSF6-206ENST00000550987 KCPQ6ZWJ8 1503 aa6.59□□□□□ -1.35
CPSF6-206ENST00000550987 LTBP1Q14766 1721 aa6.59□□□□□ -1.36
CPSF6-206ENST00000550987 NALCNQ8IZF0 1738 aa6.59□□□□□ -1.36
CPSF6-206ENST00000550987 KIF27Q86VH2 1401 aa6.59□□□□□ -1.36
CPSF6-206ENST00000550987 MKI67P46013 3256 aaKnown RBP6.58□□□□□ -1.36
CPSF6-206ENST00000550987 PMM2O15305 246 aa6.58□□□□□ -1.36
CPSF6-206ENST00000550987 MYL3P08590 195 aa6.58□□□□□ -1.36
CPSF6-206ENST00000550987 RHCEP18577 417 aa6.58□□□□□ -1.36
CPSF6-206ENST00000550987 NKX3-2P78367 333 aa6.58□□□□□ -1.36
CPSF6-206ENST00000550987 RHDQ02161 417 aa6.58□□□□□ -1.36
CPSF6-206ENST00000550987 KIAA0753Q2KHM9 967 aa6.58□□□□□ -1.36
CPSF6-206ENST00000550987 ANO4Q32M45 955 aa6.58□□□□□ -1.36
CPSF6-206ENST00000550987 CD276Q5ZPR3 534 aa6.58□□□□□ -1.36
CPSF6-206ENST00000550987 MORC1Q86VD1 984 aa6.58□□□□□ -1.36
CPSF6-206ENST00000550987 DENND1CQ8IV53 801 aa6.58□□□□□ -1.36
CPSF6-206ENST00000550987 PARD3BQ8TEW8 1205 aa6.58□□□□□ -1.36
CPSF6-206ENST00000550987 GAB3Q8WWW8 586 aa6.58□□□□□ -1.36
CPSF6-206ENST00000550987 IL17RAQ96F46 866 aa6.58□□□□□ -1.36
CPSF6-206ENST00000550987 STRBPQ96SI9 672 aaKnown RBP6.58□□□□□ -1.36
CPSF6-206ENST00000550987 ADI1Q9BV57 179 aa6.58□□□□□ -1.36
CPSF6-206ENST00000550987 NGRNQ9NPE2 291 aaKnown RBP6.58□□□□□ -1.36
CPSF6-206ENST00000550987 GALNT8Q9NY28 637 aa6.58□□□□□ -1.36
CPSF6-206ENST00000550987 SERPINB13Q9UIV8 391 aa6.58□□□□□ -1.36
CPSF6-206ENST00000550987 INTUQ9ULD6 942 aa6.58□□□□□ -1.36
CPSF6-206ENST00000550987 SYNPO2Q9UMS6 1093 aa6.58□□□□□ -1.36
CPSF6-206ENST00000550987 PKD1L3Q7Z443 1732 aa6.58□□□□□ -1.36
CPSF6-206ENST00000550987 CDC42BPBQ9Y5S2 1711 aa6.58□□□□□ -1.36
CPSF6-206ENST00000550987 CCDC154A6NI56 674 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 IFRD1O00458 451 aaPredicted RBP6.57□□□□□ -1.36
CPSF6-206ENST00000550987 TPP1O14773 563 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 PQBP1O60828 265 aaKnown RBP6.57□□□□□ -1.36
CPSF6-206ENST00000550987 LRG1P02750 347 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 PFKMP08237 780 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 GSPT1P15170 499 aaKnown RBP6.57□□□□□ -1.36
CPSF6-206ENST00000550987 POLD1P28340 1107 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 STAT5AP42229 794 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 ECE1P42892 770 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 USP14P54578 494 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 PFKPQ01813 784 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 MUM1L1Q5H9M0 696 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 VASNQ6EMK4 673 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 DARS2Q6PI48 645 aaKnown RBP6.57□□□□□ -1.36
CPSF6-206ENST00000550987 TEPPQ6URK8 271 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 FAM180AQ6UWF9 173 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 CD300LDQ6UXZ3 194 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 ETV3LQ6ZN32 361 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 KANSL1Q7Z3B3 1105 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 ZC3H18Q86VM9 953 aaKnown RBP6.57□□□□□ -1.36
CPSF6-206ENST00000550987 FAM126BQ8IXS8 530 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 FAM9AQ8IZU1 332 aaPredicted RBP6.57□□□□□ -1.36
CPSF6-206ENST00000550987 FAM156AQ8NDB6 213 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 AGBL5Q8NDL9 886 aa6.57□□□□□ -1.36
CPSF6-206ENST00000550987 PPP1R35Q8TAP8 253 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms