RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 ALCAMQ13740 583 aa14.82□□□□□ -0.04
ERBB3-215ENST00000550828 TDHQ8IZJ6 230 aa14.82□□□□□ -0.04
ERBB3-215ENST00000550828 MYOCDQ8IZQ8 938 aa14.82□□□□□ -0.04
ERBB3-215ENST00000550828 ADSSL1Q8N142 457 aa14.82□□□□□ -0.04
ERBB3-215ENST00000550828 GUF1Q8N442 669 aaKnown RBP14.82□□□□□ -0.04
ERBB3-215ENST00000550828 USP38Q8NB14 1042 aa14.82□□□□□ -0.04
ERBB3-215ENST00000550828 ZSWIM2Q8NEG5 633 aa14.82□□□□□ -0.04
ERBB3-215ENST00000550828 CCDC47Q96A33 483 aaKnown RBP14.82□□□□□ -0.04
ERBB3-215ENST00000550828 SYAP1Q96A49 352 aaPredicted RBP14.82□□□□□ -0.04
ERBB3-215ENST00000550828 ACCSQ96QU6 501 aa14.82□□□□□ -0.04
ERBB3-215ENST00000550828 MRPL4Q9BYD3 311 aaKnown RBP14.82□□□□□ -0.04
ERBB3-215ENST00000550828 SEMA6BQ9H3T3 888 aa14.82□□□□□ -0.04
ERBB3-215ENST00000550828 PTPRHQ9HD43 1115 aa14.82□□□□□ -0.04
ERBB3-215ENST00000550828 PCDHB13Q9Y5F0 798 aa14.82□□□□□ -0.04
ERBB3-215ENST00000550828 TDRD15B5MCY1 1934 aaKnown RBP14.82□□□□□ -0.04
ERBB3-215ENST00000550828 H0YCG3 227 aa14.81□□□□□ -0.04
ERBB3-215ENST00000550828 SFPQP23246 707 aaKnown RBP eCLIP14.81□□□□□ -0.04
ERBB3-215ENST00000550828 ADSSP30520 456 aa14.81□□□□□ -0.04
ERBB3-215ENST00000550828 RFC2P35250 354 aa14.81□□□□□ -0.04
ERBB3-215ENST00000550828 TYRO3Q06418 890 aa14.81□□□□□ -0.04
ERBB3-215ENST00000550828 PRPF4BQ13523 1007 aaKnown RBP14.81□□□□□ -0.04
ERBB3-215ENST00000550828 KNOP1Q1ED39 458 aaKnown RBP14.81□□□□□ -0.04
ERBB3-215ENST00000550828 ZCWPW2Q504Y3 356 aa14.81□□□□□ -0.04
ERBB3-215ENST00000550828 C11orf57Q6ZUT1 292 aaPredicted RBP14.81□□□□□ -0.04
ERBB3-215ENST00000550828 PRIMPOLQ96LW4 560 aa14.81□□□□□ -0.04
ERBB3-215ENST00000550828 MTMR10Q9NXD2 777 aa14.81□□□□□ -0.04
ERBB3-215ENST00000550828 KCNG1Q9UIX4 513 aa14.81□□□□□ -0.04
ERBB3-215ENST00000550828 PIN4Q9Y237 131 aaKnown RBP14.81□□□□□ -0.04
ERBB3-215ENST00000550828 A0A1B0GUA9 196 aa14.8□□□□□ -0.04
ERBB3-215ENST00000550828 TRIM49BA6NDI0 452 aa14.8□□□□□ -0.04
ERBB3-215ENST00000550828 GPR182O15218 404 aa14.8□□□□□ -0.04
ERBB3-215ENST00000550828 ERLIN2O94905 339 aa14.8□□□□□ -0.04
ERBB3-215ENST00000550828 PARNO95453 639 aaKnown RBP14.8□□□□□ -0.04
ERBB3-215ENST00000550828 STRN3Q13033 797 aa14.8□□□□□ -0.04
ERBB3-215ENST00000550828 ATF7IP2Q5U623 682 aa14.8□□□□□ -0.04
ERBB3-215ENST00000550828 ZPBP2Q6X784 338 aa14.8□□□□□ -0.04
ERBB3-215ENST00000550828 TMEM199Q8N511 208 aa14.8□□□□□ -0.04
ERBB3-215ENST00000550828 EIF2AQ9BY44 585 aaKnown RBP14.8□□□□□ -0.04
ERBB3-215ENST00000550828 GZF1Q9H116 711 aaPredicted RBP14.8□□□□□ -0.04
ERBB3-215ENST00000550828 CDT1Q9H211 546 aa14.8□□□□□ -0.04
ERBB3-215ENST00000550828 IL23AQ9NPF7 189 aa14.8□□□□□ -0.04
ERBB3-215ENST00000550828 PRKAG2Q9UGJ0 569 aa14.8□□□□□ -0.04
ERBB3-215ENST00000550828 TNFSF13BQ9Y275 285 aa14.8□□□□□ -0.04
ERBB3-215ENST00000550828 KIAA1671Q9BY89 1806 aa14.8□□□□□ -0.04
ERBB3-215ENST00000550828 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.79□□□□□ -0.04
ERBB3-215ENST00000550828 HNRNPDLO14979 420 aaKnown RBP14.79□□□□□ -0.04
ERBB3-215ENST00000550828 MEFVO15553 781 aaPredicted RBP14.79□□□□□ -0.04
ERBB3-215ENST00000550828 FAM189A1O60320 539 aa14.79□□□□□ -0.04
ERBB3-215ENST00000550828 ATF7P17544 494 aaPredicted RBP14.79□□□□□ -0.04
ERBB3-215ENST00000550828 SCP2P22307 547 aa14.79□□□□□ -0.04
ERBB3-215ENST00000550828 MAGEA10P43363 369 aaPredicted RBP14.79□□□□□ -0.04
ERBB3-215ENST00000550828 FPGSQ05932 587 aa14.79□□□□□ -0.04
ERBB3-215ENST00000550828 PCBP1Q15365 356 aaKnown RBP eCLIP14.79□□□□□ -0.04
ERBB3-215ENST00000550828 ZBTB41Q5SVQ8 909 aa14.79□□□□□ -0.04
ERBB3-215ENST00000550828 CENPPQ6IPU0 288 aa14.79□□□□□ -0.04
ERBB3-215ENST00000550828 KLHL10Q6JEL2 608 aa14.79□□□□□ -0.04
ERBB3-215ENST00000550828 CNKSR3Q6P9H4 555 aa14.79□□□□□ -0.04
ERBB3-215ENST00000550828 CEP120Q8N960 986 aa14.79□□□□□ -0.04
ERBB3-215ENST00000550828 SEPT8Q92599 483 aa14.79□□□□□ -0.04
ERBB3-215ENST00000550828 ADAM2Q99965 735 aa14.79□□□□□ -0.04
ERBB3-215ENST00000550828 CBWD1Q9BRT8 395 aa14.79□□□□□ -0.04
ERBB3-215ENST00000550828 AGPAT3Q9NRZ7 376 aa14.79□□□□□ -0.04
ERBB3-215ENST00000550828 CTNND2Q9UQB3 1225 aa14.79□□□□□ -0.04
ERBB3-215ENST00000550828 STYXL1Q9Y6J8 313 aa14.79□□□□□ -0.04
ERBB3-215ENST00000550828 A0A0B4J269 797 aa14.78□□□□□ -0.04
ERBB3-215ENST00000550828 N4BP3O15049 544 aa14.78□□□□□ -0.04
ERBB3-215ENST00000550828 CLIC2O15247 247 aa14.78□□□□□ -0.04
ERBB3-215ENST00000550828 NPTXRO95502 500 aa14.78□□□□□ -0.04
ERBB3-215ENST00000550828 AXLP30530 894 aa14.78□□□□□ -0.04
ERBB3-215ENST00000550828 LIG4P49917 911 aa14.78□□□□□ -0.04
ERBB3-215ENST00000550828 MCL1Q07820 350 aa14.78□□□□□ -0.04
ERBB3-215ENST00000550828 PPIGQ13427 754 aaKnown RBP eCLIP14.78□□□□□ -0.044e-13■□□□□ 9.9
ERBB3-215ENST00000550828 STX1AQ16623 288 aa14.78□□□□□ -0.04
ERBB3-215ENST00000550828 ZNF568Q3ZCX4 644 aa14.78□□□□□ -0.04
ERBB3-215ENST00000550828 TMEM240Q5SV17 173 aa14.78□□□□□ -0.04
ERBB3-215ENST00000550828 TTI2Q6NXR4 508 aa14.78□□□□□ -0.04
ERBB3-215ENST00000550828 NOTUMQ6P988 496 aa14.78□□□□□ -0.04
ERBB3-215ENST00000550828 MPZL3Q6UWV2 235 aa14.78□□□□□ -0.04
ERBB3-215ENST00000550828 STXBP4Q6ZWJ1 553 aa14.78□□□□□ -0.04
ERBB3-215ENST00000550828 Q7L0L9 218 aa14.78□□□□□ -0.04
ERBB3-215ENST00000550828 ZBTB33Q86T24 672 aa14.78□□□□□ -0.04
ERBB3-215ENST00000550828 TMEM192Q8IY95 271 aa14.78□□□□□ -0.04
ERBB3-215ENST00000550828 MLKLQ8NB16 471 aa14.78□□□□□ -0.04
ERBB3-215ENST00000550828 NELFBQ8WX92 580 aa14.78□□□□□ -0.04
ERBB3-215ENST00000550828 BICD1Q96G01 975 aa14.78□□□□□ -0.04
ERBB3-215ENST00000550828 DUSP9Q99956 384 aaKnown RBP14.78□□□□□ -0.04
ERBB3-215ENST00000550828 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.78□□□□□ -0.041e-14■■■□□ 18.1
ERBB3-215ENST00000550828 COL25A1Q9BXS0 654 aaPredicted RBP14.78□□□□□ -0.04
ERBB3-215ENST00000550828 UBE2OQ9C0C9 1292 aaKnown RBP14.78□□□□□ -0.04
ERBB3-215ENST00000550828 GBP3Q9H0R5 595 aa14.78□□□□□ -0.04
ERBB3-215ENST00000550828 TSPYL2Q9H2G4 693 aaPredicted RBP14.78□□□□□ -0.04
ERBB3-215ENST00000550828 ANKFY1Q9P2R3 1169 aa14.78□□□□□ -0.04
ERBB3-215ENST00000550828 MEIS3P2A8K0S8 358 aa14.77□□□□□ -0.05
ERBB3-215ENST00000550828 C9IYK1 514 aa14.77□□□□□ -0.05
ERBB3-215ENST00000550828 ENPP3O14638 875 aa14.77□□□□□ -0.05
ERBB3-215ENST00000550828 TOM1L1O75674 476 aa14.77□□□□□ -0.05
ERBB3-215ENST00000550828 CCNE1P24864 410 aa14.77□□□□□ -0.05
ERBB3-215ENST00000550828 ABCD1P33897 745 aa14.77□□□□□ -0.05
ERBB3-215ENST00000550828 STX17P56962 302 aa14.77□□□□□ -0.05
ERBB3-215ENST00000550828 SEZ6Q53EL9 994 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms