RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 UBXN11Q5T124 520 aa25.68■■□□□ 1.7
SMARCD1-209ENST00000550477 C15orf39Q6ZRI6 1047 aa25.68■■□□□ 1.7
SMARCD1-209ENST00000550477 OXER1Q8TDS5 423 aa25.68■■□□□ 1.7
SMARCD1-209ENST00000550477 PHOX2BQ99453 314 aa25.68■■□□□ 1.7
SMARCD1-209ENST00000550477 SLITRK3O94933 977 aa25.67■■□□□ 1.7
SMARCD1-209ENST00000550477 ASGR2P07307 311 aa25.67■■□□□ 1.7
SMARCD1-209ENST00000550477 ANAPC15P60006 121 aa25.67■■□□□ 1.7
SMARCD1-209ENST00000550477 KANK3Q6NY19 840 aa25.67■■□□□ 1.7
SMARCD1-209ENST00000550477 CYP26C1Q6V0L0 522 aa25.67■■□□□ 1.7
SMARCD1-209ENST00000550477 COLEC11Q9BWP8 271 aa25.67■■□□□ 1.7
SMARCD1-209ENST00000550477 CSRNP2Q9H175 543 aa25.67■■□□□ 1.7
SMARCD1-209ENST00000550477 ANKEF1Q9NU02 776 aa25.67■■□□□ 1.7
SMARCD1-209ENST00000550477 IPPQ9Y573 584 aa25.67■■□□□ 1.7
SMARCD1-209ENST00000550477 C2CD2LO14523 706 aa25.66■■□□□ 1.7
SMARCD1-209ENST00000550477 GALR2O43603 387 aaPredicted RBP25.66■■□□□ 1.7
SMARCD1-209ENST00000550477 PDGFBP01127 241 aaPredicted RBP25.66■■□□□ 1.7
SMARCD1-209ENST00000550477 TRIM29Q14134 588 aa25.66■■□□□ 1.7
SMARCD1-209ENST00000550477 CALCRLQ16602 461 aa25.66■■□□□ 1.7
SMARCD1-209ENST00000550477 STAMQ92783 540 aa25.66■■□□□ 1.7
SMARCD1-209ENST00000550477 EIF2AK1Q9BQI3 630 aaKnown RBP25.66■■□□□ 1.7
SMARCD1-209ENST00000550477 HERC2P3Q9BVR0 1158 aa25.66■■□□□ 1.7
SMARCD1-209ENST00000550477 GIT1Q9Y2X7 761 aa25.66■■□□□ 1.7
SMARCD1-209ENST00000550477 PRG3Q9Y2Y8 225 aaPredicted RBP25.66■■□□□ 1.7
SMARCD1-209ENST00000550477 ARL5CA6NH57 179 aa25.65■■□□□ 1.7
SMARCD1-209ENST00000550477 EIF5BO60841 1220 aaKnown RBP25.65■■□□□ 1.7
SMARCD1-209ENST00000550477 LYPLA2O95372 231 aa25.65■■□□□ 1.7
SMARCD1-209ENST00000550477 GLUD2P49448 558 aa25.65■■□□□ 1.7
SMARCD1-209ENST00000550477 SPIRE1Q08AE8 756 aa25.65■■□□□ 1.7
SMARCD1-209ENST00000550477 ASTLQ6HA08 431 aaPredicted RBP25.65■■□□□ 1.7
SMARCD1-209ENST00000550477 IFNLR1Q8IU57 520 aaPredicted RBP25.65■■□□□ 1.7
SMARCD1-209ENST00000550477 COLGALT2Q8IYK4 626 aa25.65■■□□□ 1.7
SMARCD1-209ENST00000550477 SMG8Q8ND04 991 aaKnown RBP25.65■■□□□ 1.7
SMARCD1-209ENST00000550477 RPS6KC1Q96S38 1066 aa25.65■■□□□ 1.7
SMARCD1-209ENST00000550477 GAD1Q99259 594 aa25.65■■□□□ 1.7
SMARCD1-209ENST00000550477 VN1R3Q9BXE9 311 aa25.65■■□□□ 1.7
SMARCD1-209ENST00000550477 TTC12Q9H892 705 aaPredicted RBP25.65■■□□□ 1.7
SMARCD1-209ENST00000550477 GJB4Q9NTQ9 266 aa25.65■■□□□ 1.7
SMARCD1-209ENST00000550477 WDFY4Q6ZS81 3184 aa25.64■■□□□ 1.7
SMARCD1-209ENST00000550477 H0Y858 1186 aa25.64■■□□□ 1.7
SMARCD1-209ENST00000550477 TSPAN1O60635 241 aa25.64■■□□□ 1.7
SMARCD1-209ENST00000550477 LILRB3O75022 631 aa25.64■■□□□ 1.7
SMARCD1-209ENST00000550477 GLUD1P00367 558 aa25.64■■□□□ 1.7
SMARCD1-209ENST00000550477 XRCC6P12956 609 aaKnown RBP eCLIP25.64■■□□□ 1.7
SMARCD1-209ENST00000550477 AFF1P51825 1210 aaKnown RBP25.64■■□□□ 1.7
SMARCD1-209ENST00000550477 TDGQ13569 410 aa25.64■■□□□ 1.7
SMARCD1-209ENST00000550477 ZBTB39O15060 712 aa25.63■■□□□ 1.69
SMARCD1-209ENST00000550477 INPPL1O15357 1258 aa25.63■■□□□ 1.69
SMARCD1-209ENST00000550477 B4GALT3O60512 393 aa25.63■■□□□ 1.69
SMARCD1-209ENST00000550477 GFRA3O60609 400 aa25.63■■□□□ 1.69
SMARCD1-209ENST00000550477 NEFLP07196 543 aa25.63■■□□□ 1.69
SMARCD1-209ENST00000550477 MLH1P40692 756 aa25.63■■□□□ 1.69
SMARCD1-209ENST00000550477 CLCN5P51795 746 aa25.63■■□□□ 1.69
SMARCD1-209ENST00000550477 NR5A1Q13285 461 aa25.63■■□□□ 1.69
SMARCD1-209ENST00000550477 CMASQ8NFW8 434 aaPredicted RBP25.63■■□□□ 1.69
SMARCD1-209ENST00000550477 CPB2Q96IY4 423 aa25.63■■□□□ 1.69
SMARCD1-209ENST00000550477 HSD17B14Q9BPX1 270 aa25.63■■□□□ 1.69
SMARCD1-209ENST00000550477 APOL6Q9BWW8 343 aa25.63■■□□□ 1.69
SMARCD1-209ENST00000550477 EIF2AQ9BY44 585 aaKnown RBP25.63■■□□□ 1.69
SMARCD1-209ENST00000550477 NFKBIZQ9BYH8 718 aa25.63■■□□□ 1.69
SMARCD1-209ENST00000550477 MAN1C1Q9NR34 630 aa25.63■■□□□ 1.69
SMARCD1-209ENST00000550477 FAM86C1Q9NVL1 165 aa25.63■■□□□ 1.69
SMARCD1-209ENST00000550477 IGSF9Q9P2J2 1179 aa25.63■■□□□ 1.69
SMARCD1-209ENST00000550477 NEMFO60524 1076 aa25.62■■□□□ 1.69
SMARCD1-209ENST00000550477 C1RP00736 705 aa25.62■■□□□ 1.69
SMARCD1-209ENST00000550477 TXKP42681 527 aa25.62■■□□□ 1.69
SMARCD1-209ENST00000550477 EARS2Q5JPH6 523 aaKnown RBP25.62■■□□□ 1.69
SMARCD1-209ENST00000550477 HDAC7Q8WUI4 952 aa25.62■■□□□ 1.69
SMARCD1-209ENST00000550477 XPNPEP1Q9NQW7 623 aa25.62■■□□□ 1.69
SMARCD1-209ENST00000550477 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.62■■□□□ 1.69
SMARCD1-209ENST00000550477 FBXL21Q9UKT6 434 aa25.62■■□□□ 1.69
SMARCD1-209ENST00000550477 CACNA1HO95180 2353 aa25.61■■□□□ 1.69
SMARCD1-209ENST00000550477 CCDC195A0A1B0GUA6 201 aa25.61■■□□□ 1.69
SMARCD1-209ENST00000550477 CTDNEP1O95476 244 aa25.61■■□□□ 1.69
SMARCD1-209ENST00000550477 ARL2P36404 184 aa25.61■■□□□ 1.69
SMARCD1-209ENST00000550477 SCNN1GP51170 649 aa25.61■■□□□ 1.69
SMARCD1-209ENST00000550477 CREMQ03060 361 aa25.61■■□□□ 1.69
SMARCD1-209ENST00000550477 DSC1Q08554 894 aa25.61■■□□□ 1.69
SMARCD1-209ENST00000550477 SLC27A1Q6PCB7 646 aa25.61■■□□□ 1.69
SMARCD1-209ENST00000550477 RHOBTB2Q9BYZ6 727 aa25.61■■□□□ 1.69
SMARCD1-209ENST00000550477 TEX28O15482 410 aa25.6■■□□□ 1.69
SMARCD1-209ENST00000550477 ARF4P18085 180 aaPredicted RBP25.6■■□□□ 1.69
SMARCD1-209ENST00000550477 GBP2P32456 591 aaPredicted RBP25.6■■□□□ 1.69
SMARCD1-209ENST00000550477 RARRES1P49788 294 aa25.6■■□□□ 1.69
SMARCD1-209ENST00000550477 MBTD1Q05BQ5 628 aa25.6■■□□□ 1.69
SMARCD1-209ENST00000550477 CAPSQ13938 189 aa25.6■■□□□ 1.69
SMARCD1-209ENST00000550477 USP41Q3LFD5 358 aa25.6■■□□□ 1.69
SMARCD1-209ENST00000550477 KIAA0319Q5VV43 1072 aa25.6■■□□□ 1.69
SMARCD1-209ENST00000550477 FLCNQ8NFG4 579 aa25.6■■□□□ 1.69
SMARCD1-209ENST00000550477 RNF39Q9H2S5 420 aa25.6■■□□□ 1.69
SMARCD1-209ENST00000550477 PLEKHA4Q9H4M7 779 aa25.6■■□□□ 1.69
SMARCD1-209ENST00000550477 KCNK12Q9HB15 430 aa25.6■■□□□ 1.69
SMARCD1-209ENST00000550477 PIDD1Q9HB75 910 aa25.6■■□□□ 1.69
SMARCD1-209ENST00000550477 RXFP1Q9HBX9 757 aa25.6■■□□□ 1.69
SMARCD1-209ENST00000550477 MARCH5Q9NX47 278 aa25.6■■□□□ 1.69
SMARCD1-209ENST00000550477 PARP2Q9UGN5 583 aa25.6■■□□□ 1.69
SMARCD1-209ENST00000550477 HES2Q9Y543 173 aa25.6■■□□□ 1.69
SMARCD1-209ENST00000550477 TDRD15B5MCY1 1934 aaKnown RBP25.59■■□□□ 1.69
SMARCD1-209ENST00000550477 DSG1Q02413 1049 aa25.59■■□□□ 1.69
SMARCD1-209ENST00000550477 GPR65Q8IYL9 337 aa25.59■■□□□ 1.69
SMARCD1-209ENST00000550477 TMEM105Q8N8V8 129 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms