RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 FBXO22Q8NEZ5 403 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 PPM1EQ8WY54 764 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 HPS3Q969F9 1004 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 ZFP42Q96MM3 310 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 TARS2Q9BW92 718 aaKnown RBP12.37□□□□□ -0.43
RAB5B-208ENST00000550283 APOL6Q9BWW8 343 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 TMEM117Q9H0C3 514 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 ALG13Q9NP73 1137 aaKnown RBP12.37□□□□□ -0.43
RAB5B-208ENST00000550283 DNAJB4Q9UDY4 337 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 INPP5FQ9Y2H2 1132 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 MYO9BQ13459 2157 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 PRRC2BQ5JSZ5 2229 aaKnown RBP12.37□□□□□ -0.43
RAB5B-208ENST00000550283 TISP43B9A030 160 aa12.36□□□□□ -0.43
RAB5B-208ENST00000550283 NT5C1B-RDH14C9J2C7 533 aa12.36□□□□□ -0.43
RAB5B-208ENST00000550283 C5orf67F2Z3F1 127 aa12.36□□□□□ -0.43
RAB5B-208ENST00000550283 ACKR2O00590 384 aa12.36□□□□□ -0.43
RAB5B-208ENST00000550283 DDHD2O94830 711 aa12.36□□□□□ -0.43
RAB5B-208ENST00000550283 ITGB1P05556 798 aa12.36□□□□□ -0.43
RAB5B-208ENST00000550283 MAPTP10636 758 aaKnown RBP12.36□□□□□ -0.43
RAB5B-208ENST00000550283 NCLP19338 710 aaKnown RBP12.36□□□□□ -0.43
RAB5B-208ENST00000550283 IRS1P35568 1242 aa12.36□□□□□ -0.43
RAB5B-208ENST00000550283 ME1P48163 572 aa12.36□□□□□ -0.43
RAB5B-208ENST00000550283 NCKAP1LP55160 1127 aa12.36□□□□□ -0.43
RAB5B-208ENST00000550283 GPM6BQ13491 265 aa12.36□□□□□ -0.43
RAB5B-208ENST00000550283 ZC2HC1CQ53FD0 456 aaPredicted RBP12.36□□□□□ -0.43
RAB5B-208ENST00000550283 SLC39A4Q6P5W5 647 aa12.36□□□□□ -0.43
RAB5B-208ENST00000550283 NOTUMQ6P988 496 aa12.36□□□□□ -0.43
RAB5B-208ENST00000550283 ZBTB8OSQ8IWT0 167 aa12.36□□□□□ -0.43
RAB5B-208ENST00000550283 MICALL1Q8N3F8 863 aa12.36□□□□□ -0.43
RAB5B-208ENST00000550283 KLHL23Q8NBE8 558 aa12.36□□□□□ -0.43
RAB5B-208ENST00000550283 COLGALT1Q8NBJ5 622 aa12.36□□□□□ -0.43
RAB5B-208ENST00000550283 RASSF8Q8NHQ8 419 aa12.36□□□□□ -0.43
RAB5B-208ENST00000550283 MAFAQ8NHW3 353 aaPredicted RBP12.36□□□□□ -0.43
RAB5B-208ENST00000550283 DDX12PQ92771 950 aa12.36□□□□□ -0.43
RAB5B-208ENST00000550283 DHX58Q96C10 678 aa12.36□□□□□ -0.43
RAB5B-208ENST00000550283 NTPCRQ9BSD7 190 aaKnown RBP12.36□□□□□ -0.43
RAB5B-208ENST00000550283 GOLPH3LQ9H4A5 285 aa12.36□□□□□ -0.43
RAB5B-208ENST00000550283 PTPRHQ9HD43 1115 aa12.36□□□□□ -0.43
RAB5B-208ENST00000550283 KMT5AQ9NQR1 393 aa12.36□□□□□ -0.43
RAB5B-208ENST00000550283 TBC1D13Q9NVG8 400 aa12.36□□□□□ -0.43
RAB5B-208ENST00000550283 PRMT7Q9NVM4 692 aaPredicted RBP12.36□□□□□ -0.43
RAB5B-208ENST00000550283 DACT1Q9NYF0 836 aa12.36□□□□□ -0.43
RAB5B-208ENST00000550283 KLK14Q9P0G3 267 aa12.36□□□□□ -0.43
RAB5B-208ENST00000550283 PLXNA4Q9HCM2 1894 aa12.36□□□□□ -0.43
RAB5B-208ENST00000550283 A0A1B0GVL5 298 aa12.35□□□□□ -0.43
RAB5B-208ENST00000550283 H3BNC9 293 aa12.35□□□□□ -0.43
RAB5B-208ENST00000550283 EOMESO95936 686 aa12.35□□□□□ -0.43
RAB5B-208ENST00000550283 MLH1P40692 756 aa12.35□□□□□ -0.43
RAB5B-208ENST00000550283 STAT6P42226 847 aa12.35□□□□□ -0.43
RAB5B-208ENST00000550283 CASP5P51878 434 aa12.35□□□□□ -0.43
RAB5B-208ENST00000550283 KCNA1Q09470 495 aa12.35□□□□□ -0.43
RAB5B-208ENST00000550283 PRPF4BQ13523 1007 aaKnown RBP12.35□□□□□ -0.43
RAB5B-208ENST00000550283 SEZ6Q53EL9 994 aa12.35□□□□□ -0.43
RAB5B-208ENST00000550283 SFR1Q86XK3 245 aa12.35□□□□□ -0.43
RAB5B-208ENST00000550283 SPPL3Q8TCT6 385 aa12.35□□□□□ -0.43
RAB5B-208ENST00000550283 KCNG4Q8TDN1 519 aa12.35□□□□□ -0.43
RAB5B-208ENST00000550283 SPIRE2Q8WWL2 714 aa12.35□□□□□ -0.43
RAB5B-208ENST00000550283 RABGGTAQ92696 567 aa12.35□□□□□ -0.43
RAB5B-208ENST00000550283 IFT74Q96LB3 600 aa12.35□□□□□ -0.43
RAB5B-208ENST00000550283 DRC1Q96MC2 740 aa12.35□□□□□ -0.43
RAB5B-208ENST00000550283 GAD1Q99259 594 aa12.35□□□□□ -0.43
RAB5B-208ENST00000550283 ACO2Q99798 780 aaKnown RBP12.35□□□□□ -0.43
RAB5B-208ENST00000550283 VN1R3Q9BXE9 311 aa12.35□□□□□ -0.43
RAB5B-208ENST00000550283 C2orf40Q9H1Z8 148 aa12.35□□□□□ -0.43
RAB5B-208ENST00000550283 NRDE2Q9H7Z3 1164 aa12.35□□□□□ -0.43
RAB5B-208ENST00000550283 SNTG2Q9NY99 539 aa12.35□□□□□ -0.43
RAB5B-208ENST00000550283 TBC1D7Q9P0N9 293 aa12.35□□□□□ -0.43
RAB5B-208ENST00000550283 STK17AQ9UEE5 414 aa12.35□□□□□ -0.43
RAB5B-208ENST00000550283 SSUH2Q9Y2M2 353 aa12.35□□□□□ -0.43
RAB5B-208ENST00000550283 RALGAPA2Q2PPJ7 1873 aa12.35□□□□□ -0.43
RAB5B-208ENST00000550283 TCHHQ07283 1943 aa12.35□□□□□ -0.43
RAB5B-208ENST00000550283 PHLPP2Q6ZVD8 1323 aa12.35□□□□□ -0.43
RAB5B-208ENST00000550283 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.34□□□□□ -0.43
RAB5B-208ENST00000550283 ARL5CA6NH57 179 aa12.34□□□□□ -0.43
RAB5B-208ENST00000550283 K7ERI5 159 aa12.34□□□□□ -0.43
RAB5B-208ENST00000550283 POLR2DO15514 142 aaKnown RBP12.34□□□□□ -0.43
RAB5B-208ENST00000550283 POMCP01189 267 aa12.34□□□□□ -0.43
RAB5B-208ENST00000550283 POU3F3P20264 500 aaPredicted RBP12.34□□□□□ -0.43
RAB5B-208ENST00000550283 PROZP22891 400 aa12.34□□□□□ -0.43
RAB5B-208ENST00000550283 AXLP30530 894 aa12.34□□□□□ -0.43
RAB5B-208ENST00000550283 GTF2F1P35269 517 aaKnown RBP eCLIP12.34□□□□□ -0.43
RAB5B-208ENST00000550283 SCNN1GP51170 649 aa12.34□□□□□ -0.43
RAB5B-208ENST00000550283 DMP1Q13316 513 aaPredicted RBP12.34□□□□□ -0.43
RAB5B-208ENST00000550283 PPP2R5AQ15172 486 aa12.34□□□□□ -0.43
RAB5B-208ENST00000550283 MAPK6Q16659 721 aa12.34□□□□□ -0.43
RAB5B-208ENST00000550283 NOMO2Q5JPE7 1267 aa12.34□□□□□ -0.43
RAB5B-208ENST00000550283 ZBTB41Q5SVQ8 909 aa12.34□□□□□ -0.43
RAB5B-208ENST00000550283 ATF7IP2Q5U623 682 aa12.34□□□□□ -0.43
RAB5B-208ENST00000550283 ATL3Q6DD88 541 aa12.34□□□□□ -0.43
RAB5B-208ENST00000550283 SLC27A1Q6PCB7 646 aa12.34□□□□□ -0.43
RAB5B-208ENST00000550283 HAUS6Q7Z4H7 955 aa12.34□□□□□ -0.43
RAB5B-208ENST00000550283 ZBTB33Q86T24 672 aa12.34□□□□□ -0.43
RAB5B-208ENST00000550283 KCTD17Q8N5Z5 321 aa12.34□□□□□ -0.43
RAB5B-208ENST00000550283 MYCT1Q8N699 235 aa12.34□□□□□ -0.43
RAB5B-208ENST00000550283 SPATA32Q96LK8 384 aa12.34□□□□□ -0.43
RAB5B-208ENST00000550283 GAS2L1Q99501 681 aaPredicted RBP12.34□□□□□ -0.43
RAB5B-208ENST00000550283 CDT1Q9H211 546 aa12.34□□□□□ -0.43
RAB5B-208ENST00000550283 ZHX3Q9H4I2 956 aa12.34□□□□□ -0.43
RAB5B-208ENST00000550283 TMEM134Q9H6X4 195 aa12.34□□□□□ -0.43
RAB5B-208ENST00000550283 RSAD1Q9HA92 442 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms