RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 NEK8Q86SG6 692 aa12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 PPFIBP1Q86W92 1011 aa12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 FLCNQ8NFG4 579 aa12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 CMASQ8NFW8 434 aaPredicted RBP12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 URGCPQ8TCY9 931 aa12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 ASAP3Q8TDY4 903 aa12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 PSPC1Q8WXF1 523 aaKnown RBP12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 SLC7A3Q8WY07 619 aa12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 CPB2Q96IY4 423 aa12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 B3GALT6Q96L58 329 aa12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 RPS6KC1Q96S38 1066 aa12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 MYADMQ96S97 322 aa12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 GAD1Q99259 594 aa12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 JPH2Q9BR39 696 aaPredicted RBP12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 IRF2BPLQ9H1B7 796 aa12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 RXFP1Q9HBX9 757 aa12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 MAN1C1Q9NR34 630 aa12.93□□□□□ -0.34
SMARCD1-208ENST00000550280 KRBA1A5PL33 1030 aa12.92□□□□□ -0.34
SMARCD1-208ENST00000550280 CARNS1A5YM72 827 aa12.92□□□□□ -0.34
SMARCD1-208ENST00000550280 ARL5CA6NH57 179 aa12.92□□□□□ -0.34
SMARCD1-208ENST00000550280 SCNN1GP51170 649 aa12.92□□□□□ -0.34
SMARCD1-208ENST00000550280 PTENP60484 403 aa12.92□□□□□ -0.34
SMARCD1-208ENST00000550280 CYP4A11Q02928 519 aa12.92□□□□□ -0.34
SMARCD1-208ENST00000550280 PIK3AP1Q6ZUJ8 805 aa12.92□□□□□ -0.34
SMARCD1-208ENST00000550280 OTOP3Q7RTS5 596 aa12.92□□□□□ -0.34
SMARCD1-208ENST00000550280 IFNLR1Q8IU57 520 aaPredicted RBP12.92□□□□□ -0.34
SMARCD1-208ENST00000550280 CCDC105Q8IYK2 499 aa12.92□□□□□ -0.34
SMARCD1-208ENST00000550280 FAM177A1Q8N128 213 aaPredicted RBP12.92□□□□□ -0.34
SMARCD1-208ENST00000550280 TMEM87AQ8NBN3 555 aa12.92□□□□□ -0.34
SMARCD1-208ENST00000550280 TNFRSF25Q93038 417 aa12.92□□□□□ -0.34
SMARCD1-208ENST00000550280 EMILIN2Q9BXX0 1053 aa12.92□□□□□ -0.34
SMARCD1-208ENST00000550280 GPR62Q9BZJ7 368 aa12.92□□□□□ -0.34
SMARCD1-208ENST00000550280 TM6SF1Q9BZW5 370 aa12.92□□□□□ -0.34
SMARCD1-208ENST00000550280 NXF3Q9H4D5 531 aaKnown RBP12.92□□□□□ -0.34
SMARCD1-208ENST00000550280 MRPL17Q9NRX2 175 aaKnown RBP12.92□□□□□ -0.34
SMARCD1-208ENST00000550280 CHST7Q9NS84 486 aa12.92□□□□□ -0.34
SMARCD1-208ENST00000550280 CACNG4Q9UBN1 327 aa12.92□□□□□ -0.34
SMARCD1-208ENST00000550280 CYP46A1Q9Y6A2 500 aa12.92□□□□□ -0.34
SMARCD1-208ENST00000550280 RIF1Q5UIP0 2472 aaKnown RBP12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 PTPRZ1P23471 2315 aaPredicted RBP12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 ARID2Q68CP9 1835 aa12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 A0A087WWV3 80 aa12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 CCDC195A0A1B0GUA6 201 aa12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 CPLX1O14810 134 aa12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 TBX3O15119 743 aa12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 B4GALT5O43286 388 aa12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 CCNT1O60563 726 aaKnown RBP12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 SLITRK3O94933 977 aa12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 REC8O95072 547 aa12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 SPATA31D3P0C874 917 aa12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 FDPSP14324 419 aaKnown RBP12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 OR1G1P47890 313 aa12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 AK2P54819 239 aa12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 DSG1Q02413 1049 aa12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 MBTD1Q05BQ5 628 aa12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 NR5A1Q13285 461 aa12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 CAPSQ13938 189 aa12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 NCAPH2Q6IBW4 605 aa12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 SPATA31D4Q6ZUB0 917 aa12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 CDR2LQ86X02 465 aaPredicted RBP12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 SIX5Q8N196 739 aa12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 ST13P5Q8NFI4 369 aaPredicted RBP12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 RABGGTAQ92696 567 aa12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 ACSF2Q96CM8 615 aaPredicted RBP12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 RHOBTB2Q9BYZ6 727 aa12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 CXCL16Q9H2A7 254 aa12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 MFSD1Q9H3U5 465 aa12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 WDR6Q9NNW5 1121 aaKnown RBP12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 KANSL3Q9P2N6 904 aa12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 TPCN1Q9ULQ1 816 aa12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 PPME1Q9Y570 386 aa12.91□□□□□ -0.34
SMARCD1-208ENST00000550280 CLUHO75153 1309 aa12.9□□□□□ -0.34
SMARCD1-208ENST00000550280 GVINP1Q7Z2Y8 2422 aa12.9□□□□□ -0.34
SMARCD1-208ENST00000550280 CCDC194A0A1B0GVG4 234 aa12.9□□□□□ -0.34
SMARCD1-208ENST00000550280 TTLL13PA6NNM8 815 aa12.9□□□□□ -0.34
SMARCD1-208ENST00000550280 URODP06132 367 aa12.9□□□□□ -0.34
SMARCD1-208ENST00000550280 ITGA4P13612 1032 aa12.9□□□□□ -0.34
SMARCD1-208ENST00000550280 GCFC2P16383 781 aaKnown RBP12.9□□□□□ -0.34
SMARCD1-208ENST00000550280 ARF4P18085 180 aaPredicted RBP12.9□□□□□ -0.34
SMARCD1-208ENST00000550280 GLRA2P23416 452 aa12.9□□□□□ -0.34
SMARCD1-208ENST00000550280 ARL2P36404 184 aa12.9□□□□□ -0.34
SMARCD1-208ENST00000550280 GLUD2P49448 558 aa12.9□□□□□ -0.34
SMARCD1-208ENST00000550280 XKR9Q5GH70 373 aa12.9□□□□□ -0.34
SMARCD1-208ENST00000550280 LILRA6Q6PI73 481 aa12.9□□□□□ -0.34
SMARCD1-208ENST00000550280 FAM193BQ96PV7 902 aaPredicted RBP12.9□□□□□ -0.34
SMARCD1-208ENST00000550280 MTRQ99707 1265 aa12.9□□□□□ -0.34
SMARCD1-208ENST00000550280 HSD17B14Q9BPX1 270 aa12.9□□□□□ -0.34
SMARCD1-208ENST00000550280 PAAF1Q9BRP4 392 aa12.9□□□□□ -0.34
SMARCD1-208ENST00000550280 CSRNP2Q9H175 543 aa12.9□□□□□ -0.34
SMARCD1-208ENST00000550280 SLKQ9H2G2 1235 aaPredicted RBP12.9□□□□□ -0.34
SMARCD1-208ENST00000550280 EPS15L1Q9UBC2 864 aa12.9□□□□□ -0.34
SMARCD1-208ENST00000550280 FAM186AA6NE01 2351 aa12.89□□□□□ -0.35
SMARCD1-208ENST00000550280 COL4A3Q01955 1670 aa12.89□□□□□ -0.35
SMARCD1-208ENST00000550280 STK36Q9NRP7 1315 aa12.89□□□□□ -0.35
SMARCD1-208ENST00000550280 SPTBN4Q9H254 2564 aa12.89□□□□□ -0.35
SMARCD1-208ENST00000550280 ASAP2O43150 1006 aa12.89□□□□□ -0.35
SMARCD1-208ENST00000550280 EPB41L2O43491 1005 aaKnown RBP12.89□□□□□ -0.35
SMARCD1-208ENST00000550280 TGM5O43548 720 aa12.89□□□□□ -0.35
SMARCD1-208ENST00000550280 GAS2O43903 313 aaKnown RBP12.89□□□□□ -0.35
SMARCD1-208ENST00000550280 GLUD1P00367 558 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms