RNA–Protein interactions for RNA: ENST00000550168.5

CACNB3-214, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 677 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-214ENST00000550168 RRAGDQ9NQL2 400 aaPredicted RBP13.7□□□□□ -0.22
CACNB3-214ENST00000550168 SUCLA2Q9P2R7 463 aaPredicted RBP13.7□□□□□ -0.22
CACNB3-214ENST00000550168 PLAGL2Q9UPG8 496 aa13.7□□□□□ -0.22
CACNB3-214ENST00000550168 ADGRA3Q8IWK6 1321 aa13.69□□□□□ -0.22
CACNB3-214ENST00000550168 NRCAMQ92823 1304 aa13.69□□□□□ -0.22
CACNB3-214ENST00000550168 GPR25O00155 361 aa13.69□□□□□ -0.22
CACNB3-214ENST00000550168 EXTL3O43909 919 aa13.69□□□□□ -0.22
CACNB3-214ENST00000550168 ZEB2O60315 1214 aa13.69□□□□□ -0.22
CACNB3-214ENST00000550168 DUSP11O75319 330 aaKnown RBP13.69□□□□□ -0.22
CACNB3-214ENST00000550168 TBC1D8O95759 1140 aa13.69□□□□□ -0.22
CACNB3-214ENST00000550168 CCDC175P0C221 793 aa13.69□□□□□ -0.22
CACNB3-214ENST00000550168 INSRRP14616 1297 aa13.69□□□□□ -0.22
CACNB3-214ENST00000550168 ANXA13P27216 316 aa13.69□□□□□ -0.22
CACNB3-214ENST00000550168 CYLC1P35663 651 aaPredicted RBP13.69□□□□□ -0.22
CACNB3-214ENST00000550168 FMO5P49326 533 aa13.69□□□□□ -0.22
CACNB3-214ENST00000550168 POU5F1Q01860 360 aaKnown RBP13.69□□□□□ -0.22
CACNB3-214ENST00000550168 SP3Q02447 781 aa13.69□□□□□ -0.22
CACNB3-214ENST00000550168 LAMTOR4Q0VGL1 99 aa13.69□□□□□ -0.22
CACNB3-214ENST00000550168 PPFIA1Q13136 1202 aa13.69□□□□□ -0.22
CACNB3-214ENST00000550168 SNRNP35Q16560 246 aaKnown RBP13.69□□□□□ -0.22
CACNB3-214ENST00000550168 KYAT1Q16773 422 aa13.69□□□□□ -0.22
CACNB3-214ENST00000550168 EFCAB12Q6NXP0 572 aa13.69□□□□□ -0.22
CACNB3-214ENST00000550168 ZNF410Q86VK4 478 aa13.69□□□□□ -0.22
CACNB3-214ENST00000550168 KSR1Q8IVT5 923 aa13.69□□□□□ -0.22
CACNB3-214ENST00000550168 LINC01465Q8N7H1 131 aa13.69□□□□□ -0.22
CACNB3-214ENST00000550168 PRPF31Q8WWY3 499 aaKnown RBP13.69□□□□□ -0.22
CACNB3-214ENST00000550168 DPF3Q92784 378 aa13.69□□□□□ -0.22
CACNB3-214ENST00000550168 PRIMPOLQ96LW4 560 aa13.69□□□□□ -0.22
CACNB3-214ENST00000550168 CBWD1Q9BRT8 395 aa13.69□□□□□ -0.22
CACNB3-214ENST00000550168 TMEM106CQ9BVX2 250 aa13.69□□□□□ -0.22
CACNB3-214ENST00000550168 SUGCTQ9HAC7 445 aa13.69□□□□□ -0.22
CACNB3-214ENST00000550168 FAM207AQ9NSI2 230 aaPredicted RBP13.69□□□□□ -0.22
CACNB3-214ENST00000550168 ZNF233A6NK53 670 aa13.68□□□□□ -0.22
CACNB3-214ENST00000550168 DYNC1LI2O43237 492 aaPredicted RBP13.68□□□□□ -0.22
CACNB3-214ENST00000550168 TOM1L1O75674 476 aa13.68□□□□□ -0.22
CACNB3-214ENST00000550168 CCDC172P0C7W6 258 aa13.68□□□□□ -0.22
CACNB3-214ENST00000550168 GNAT1P11488 350 aa13.68□□□□□ -0.22
CACNB3-214ENST00000550168 AP3M2P53677 418 aa13.68□□□□□ -0.22
CACNB3-214ENST00000550168 NKX3-2P78367 333 aa13.68□□□□□ -0.22
CACNB3-214ENST00000550168 KRT83P78385 493 aa13.68□□□□□ -0.22
CACNB3-214ENST00000550168 MYL7Q01449 175 aa13.68□□□□□ -0.22
CACNB3-214ENST00000550168 KCNMA1Q12791 1236 aa13.68□□□□□ -0.22
CACNB3-214ENST00000550168 SURF1Q15526 300 aa13.68□□□□□ -0.22
CACNB3-214ENST00000550168 FAM187BQ17R55 369 aa13.68□□□□□ -0.22
CACNB3-214ENST00000550168 APBB1IPQ7Z5R6 666 aaPredicted RBP13.68□□□□□ -0.22
CACNB3-214ENST00000550168 RNF149Q8NC42 400 aa13.68□□□□□ -0.22
CACNB3-214ENST00000550168 MFSD14AQ96MC6 490 aa13.68□□□□□ -0.22
CACNB3-214ENST00000550168 KIFC3Q9BVG8 833 aa13.68□□□□□ -0.22
CACNB3-214ENST00000550168 LSM14BQ9BX40 385 aaKnown RBP13.68□□□□□ -0.22
CACNB3-214ENST00000550168 CCDC113Q9H0I3 377 aa13.68□□□□□ -0.22
CACNB3-214ENST00000550168 RNPEPQ9H4A4 650 aa13.68□□□□□ -0.22
CACNB3-214ENST00000550168 PRMT7Q9NVM4 692 aaPredicted RBP13.68□□□□□ -0.22
CACNB3-214ENST00000550168 FLRT1Q9NZU1 646 aa13.68□□□□□ -0.22
CACNB3-214ENST00000550168 GCNT4Q9P109 453 aa13.68□□□□□ -0.22
CACNB3-214ENST00000550168 USP20Q9Y2K6 914 aa13.68□□□□□ -0.22
CACNB3-214ENST00000550168 BZW2Q9Y6E2 419 aaKnown RBP13.68□□□□□ -0.22
CACNB3-214ENST00000550168 MCM3APO60318 1980 aa13.68□□□□□ -0.22
CACNB3-214ENST00000550168 CACNA1GO43497 2377 aa13.68□□□□□ -0.22
CACNB3-214ENST00000550168 SIP14410 1827 aa13.67□□□□□ -0.22
CACNB3-214ENST00000550168 SSU72P8A0A1W2PR75 194 aa13.67□□□□□ -0.22
CACNB3-214ENST00000550168 ACKR2O00590 384 aa13.67□□□□□ -0.22
CACNB3-214ENST00000550168 KLRC1P26715 233 aa13.67□□□□□ -0.22
CACNB3-214ENST00000550168 ADSSP30520 456 aa13.67□□□□□ -0.22
CACNB3-214ENST00000550168 CYP2C19P33261 490 aa13.67□□□□□ -0.22
CACNB3-214ENST00000550168 PRMT2P55345 433 aa13.67□□□□□ -0.22
CACNB3-214ENST00000550168 PTENP60484 403 aa13.67□□□□□ -0.22
CACNB3-214ENST00000550168 GRIK4Q16099 956 aa13.67□□□□□ -0.22
CACNB3-214ENST00000550168 PTPN21Q16825 1174 aa13.67□□□□□ -0.22
CACNB3-214ENST00000550168 E4F1Q66K89 784 aaPredicted RBP13.67□□□□□ -0.22
CACNB3-214ENST00000550168 PDXDC1Q6P996 788 aa13.67□□□□□ -0.22
CACNB3-214ENST00000550168 MTHFD1LQ6UB35 978 aa13.67□□□□□ -0.22
CACNB3-214ENST00000550168 TAS1R3Q7RTX0 852 aa13.67□□□□□ -0.22
CACNB3-214ENST00000550168 FZD8Q9H461 694 aa13.67□□□□□ -0.22
CACNB3-214ENST00000550168 LUC7LQ9NQ29 371 aaKnown RBP13.67□□□□□ -0.22
CACNB3-214ENST00000550168 AGO2Q9UKV8 859 aaKnown RBP13.67□□□□□ -0.22
CACNB3-214ENST00000550168 PRUNE2Q8WUY3 3088 aa13.66□□□□□ -0.22
CACNB3-214ENST00000550168 A0A0B4J269 797 aa13.66□□□□□ -0.22
CACNB3-214ENST00000550168 ANKRD63C9JTQ0 380 aa13.66□□□□□ -0.22
CACNB3-214ENST00000550168 HAS3O00219 553 aa13.66□□□□□ -0.22
CACNB3-214ENST00000550168 ZC3H11AO75152 810 aaKnown RBP eCLIP13.66□□□□□ -0.22
CACNB3-214ENST00000550168 OFD1O75665 1012 aa13.66□□□□□ -0.22
CACNB3-214ENST00000550168 PRKCBP05771 671 aa13.66□□□□□ -0.22
CACNB3-214ENST00000550168 ZNF286BP0CG31 522 aa13.66□□□□□ -0.22
CACNB3-214ENST00000550168 CYBAP13498 195 aa13.66□□□□□ -0.22
CACNB3-214ENST00000550168 PON1P27169 355 aa13.66□□□□□ -0.22
CACNB3-214ENST00000550168 MXI1P50539 228 aa13.66□□□□□ -0.22
CACNB3-214ENST00000550168 GJA9P57773 515 aa13.66□□□□□ -0.22
CACNB3-214ENST00000550168 CYP24A1Q07973 514 aa13.66□□□□□ -0.22
CACNB3-214ENST00000550168 MKRN4PQ13434 485 aaPredicted RBP13.66□□□□□ -0.22
CACNB3-214ENST00000550168 PSMD6Q15008 389 aa13.66□□□□□ -0.22
CACNB3-214ENST00000550168 PTPN14Q15678 1187 aa13.66□□□□□ -0.22
CACNB3-214ENST00000550168 SLC9C1Q4G0N8 1177 aa13.66□□□□□ -0.22
CACNB3-214ENST00000550168 DNTTIP2Q5QJE6 756 aaKnown RBP13.66□□□□□ -0.22
CACNB3-214ENST00000550168 TMEM63BQ5T3F8 832 aa13.66□□□□□ -0.22
CACNB3-214ENST00000550168 GJC2Q5T442 439 aaPredicted RBP13.66□□□□□ -0.22
CACNB3-214ENST00000550168 KLHDC7AQ5VTJ3 777 aa13.66□□□□□ -0.22
CACNB3-214ENST00000550168 SFMBT2Q5VUG0 894 aa13.66□□□□□ -0.22
CACNB3-214ENST00000550168 KRT39Q6A163 491 aa13.66□□□□□ -0.22
CACNB3-214ENST00000550168 SLC39A4Q6P5W5 647 aa13.66□□□□□ -0.22
CACNB3-214ENST00000550168 TSHZ1Q6ZSZ6 1077 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms